RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 PPP2R1BP30154 601 aa10.78□□□□□ -0.68
SLIRP-205ENST00000556310 BSGP35613 385 aa10.78□□□□□ -0.68
SLIRP-205ENST00000556310 TNFRSF17Q02223 184 aa10.78□□□□□ -0.68
SLIRP-205ENST00000556310 SLAMF1Q13291 335 aa10.78□□□□□ -0.68
SLIRP-205ENST00000556310 SERTAD2Q14140 314 aa10.78□□□□□ -0.68
SLIRP-205ENST00000556310 ELAVL1Q15717 326 aaKnown RBP10.78□□□□□ -0.68
SLIRP-205ENST00000556310 INAQ16352 499 aa10.78□□□□□ -0.68
SLIRP-205ENST00000556310 MEP1AQ16819 746 aa10.78□□□□□ -0.68
SLIRP-205ENST00000556310 CCDC153Q494R4 210 aa10.78□□□□□ -0.68
SLIRP-205ENST00000556310 UNC50Q53HI1 259 aa10.78□□□□□ -0.68
SLIRP-205ENST00000556310 ACER2Q5QJU3 275 aa10.78□□□□□ -0.68
SLIRP-205ENST00000556310 FCRLBQ6BAA4 426 aa10.78□□□□□ -0.68
SLIRP-205ENST00000556310 MRM1Q6IN84 353 aaKnown RBP10.78□□□□□ -0.68
SLIRP-205ENST00000556310 RPUSD3Q6P087 351 aaKnown RBP10.78□□□□□ -0.68
SLIRP-205ENST00000556310 ZYG11AQ6WRX3 759 aa10.78□□□□□ -0.68
SLIRP-205ENST00000556310 VASH1Q7L8A9 365 aaPredicted RBP10.78□□□□□ -0.68
SLIRP-205ENST00000556310 CRLF3Q8IUI8 442 aa10.78□□□□□ -0.68
SLIRP-205ENST00000556310 BEST3Q8N1M1 668 aa10.78□□□□□ -0.68
SLIRP-205ENST00000556310 KIF2BQ8N4N8 673 aa10.78□□□□□ -0.68
SLIRP-205ENST00000556310 C7orf57Q8NEG2 295 aa10.78□□□□□ -0.68
SLIRP-205ENST00000556310 B3GNT7Q8NFL0 401 aa10.78□□□□□ -0.68
SLIRP-205ENST00000556310 TRPC4APQ8TEL6 797 aa10.78□□□□□ -0.68
SLIRP-205ENST00000556310 SNRNP40Q96DI7 357 aaKnown RBP10.78□□□□□ -0.68
SLIRP-205ENST00000556310 DDX31Q9H8H2 851 aaKnown RBP10.78□□□□□ -0.68
SLIRP-205ENST00000556310 PNO1Q9NRX1 252 aaKnown RBP10.78□□□□□ -0.68
SLIRP-205ENST00000556310 LYARQ9NX58 379 aaKnown RBP10.78□□□□□ -0.68
SLIRP-205ENST00000556310 ZNF225Q9UK10 706 aa10.78□□□□□ -0.68
SLIRP-205ENST00000556310 VPS4AQ9UN37 437 aa10.78□□□□□ -0.68
SLIRP-205ENST00000556310 SNX6Q9UNH7 406 aa10.78□□□□□ -0.68
SLIRP-205ENST00000556310 PPIEQ9UNP9 301 aaKnown RBP10.78□□□□□ -0.68
SLIRP-205ENST00000556310 ESPL1Q14674 2120 aa10.78□□□□□ -0.68
SLIRP-205ENST00000556310 A8MUA0 341 aa10.77□□□□□ -0.69
SLIRP-205ENST00000556310 PPP6CO00743 305 aa10.77□□□□□ -0.69
SLIRP-205ENST00000556310 CDK2AP1O14519 115 aa10.77□□□□□ -0.69
SLIRP-205ENST00000556310 COPEO14579 308 aa10.77□□□□□ -0.69
SLIRP-205ENST00000556310 PLIN3O60664 434 aa10.77□□□□□ -0.69
SLIRP-205ENST00000556310 EEDO75530 441 aaKnown RBP10.77□□□□□ -0.69
SLIRP-205ENST00000556310 OR4F21O95013 312 aa10.77□□□□□ -0.69
SLIRP-205ENST00000556310 MYL2P10916 166 aa10.77□□□□□ -0.69
SLIRP-205ENST00000556310 CRHR1P34998 444 aa10.77□□□□□ -0.69
SLIRP-205ENST00000556310 BUD31P41223 144 aaPredicted RBP10.77□□□□□ -0.69
SLIRP-205ENST00000556310 CCT5P48643 541 aa10.77□□□□□ -0.69
SLIRP-205ENST00000556310 HNRNPH2P55795 449 aaKnown RBP10.77□□□□□ -0.69
SLIRP-205ENST00000556310 IGLV3-21P80748 117 aaPredicted RBP10.77□□□□□ -0.69
SLIRP-205ENST00000556310 STX4Q12846 297 aa10.77□□□□□ -0.69
SLIRP-205ENST00000556310 LCP2Q13094 533 aa10.77□□□□□ -0.69
SLIRP-205ENST00000556310 GPRIN3Q6ZVF9 776 aa10.77□□□□□ -0.69
SLIRP-205ENST00000556310 GPR180Q86V85 440 aa10.77□□□□□ -0.69
SLIRP-205ENST00000556310 ARMC10Q8N2F6 343 aa10.77□□□□□ -0.69
SLIRP-205ENST00000556310 TMEM132CQ8N3T6 1108 aa10.77□□□□□ -0.69
SLIRP-205ENST00000556310 CISD2Q8N5K1 135 aaKnown RBP10.77□□□□□ -0.69
SLIRP-205ENST00000556310 APCDD1LQ8NCL9 501 aa10.77□□□□□ -0.69
SLIRP-205ENST00000556310 CATSPER1Q8NEC5 780 aa10.77□□□□□ -0.69
SLIRP-205ENST00000556310 OR1N1Q8NGS0 311 aa10.77□□□□□ -0.69
SLIRP-205ENST00000556310 OR2W6PQ8NHA6 318 aa10.77□□□□□ -0.69
SLIRP-205ENST00000556310 RDH11Q8TC12 318 aa10.77□□□□□ -0.69
SLIRP-205ENST00000556310 SELENOMQ8WWX9 145 aa10.77□□□□□ -0.69
SLIRP-205ENST00000556310 C19orf60Q96EN9 201 aa10.77□□□□□ -0.69
SLIRP-205ENST00000556310 VMP1Q96GC9 406 aa10.77□□□□□ -0.69
SLIRP-205ENST00000556310 BARD1Q99728 777 aaKnown RBP10.77□□□□□ -0.69
SLIRP-205ENST00000556310 NPAS2Q99743 824 aa10.77□□□□□ -0.69
SLIRP-205ENST00000556310 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.77□□□□□ -0.69
SLIRP-205ENST00000556310 BRF2Q9HAW0 419 aa10.77□□□□□ -0.69
SLIRP-205ENST00000556310 ASF1BQ9NVP2 202 aa10.77□□□□□ -0.69
SLIRP-205ENST00000556310 MKS1Q9NXB0 559 aa10.77□□□□□ -0.69
SLIRP-205ENST00000556310 STMN3Q9NZ72 180 aa10.77□□□□□ -0.69
SLIRP-205ENST00000556310 VTI1BQ9UEU0 232 aa10.77□□□□□ -0.69
SLIRP-205ENST00000556310 LGALS13Q9UHV8 139 aa10.77□□□□□ -0.69
SLIRP-205ENST00000556310 GRID1Q9ULK0 1009 aa10.77□□□□□ -0.69
SLIRP-205ENST00000556310 NTNG1Q9Y2I2 539 aa10.77□□□□□ -0.69
SLIRP-205ENST00000556310 ATG4BQ9Y4P1 393 aa10.77□□□□□ -0.69
SLIRP-205ENST00000556310 COPG1Q9Y678 874 aaKnown RBP10.77□□□□□ -0.69
SLIRP-205ENST00000556310 HIVEP3Q5T1R4 2406 aa10.77□□□□□ -0.69
SLIRP-205ENST00000556310 FLNBO75369 2602 aaKnown RBP10.76□□□□□ -0.69
SLIRP-205ENST00000556310 SVILO95425 2214 aa10.76□□□□□ -0.69
SLIRP-205ENST00000556310 TRBV11-1A0A0K0K1C0 115 aa10.76□□□□□ -0.69
SLIRP-205ENST00000556310 TLDC2A0PJX2 215 aa10.76□□□□□ -0.69
SLIRP-205ENST00000556310 GABRR3A8MPY1 467 aa10.76□□□□□ -0.69
SLIRP-205ENST00000556310 G3V2L1 256 aa10.76□□□□□ -0.69
SLIRP-205ENST00000556310 TMPRSS11DO60235 418 aa10.76□□□□□ -0.69
SLIRP-205ENST00000556310 FGF17O60258 216 aa10.76□□□□□ -0.69
SLIRP-205ENST00000556310 MAN1A2O60476 641 aa10.76□□□□□ -0.69
SLIRP-205ENST00000556310 PRAMEF2O60811 474 aa10.76□□□□□ -0.69
SLIRP-205ENST00000556310 LDB3O75112 727 aa10.76□□□□□ -0.69
SLIRP-205ENST00000556310 F10P00742 488 aa10.76□□□□□ -0.69
SLIRP-205ENST00000556310 KRT6AP02538 564 aa10.76□□□□□ -0.69
SLIRP-205ENST00000556310 KRT6BP04259 564 aa10.76□□□□□ -0.69
SLIRP-205ENST00000556310 IFNA16P05015 189 aa10.76□□□□□ -0.69
SLIRP-205ENST00000556310 ENO1P06733 434 aaKnown RBP10.76□□□□□ -0.69
SLIRP-205ENST00000556310 FAM58BPP0C7Q3 252 aa10.76□□□□□ -0.69
SLIRP-205ENST00000556310 NR2F6P10588 404 aa10.76□□□□□ -0.69
SLIRP-205ENST00000556310 HSD3B1P14060 373 aa10.76□□□□□ -0.69
SLIRP-205ENST00000556310 KRT4P19013 534 aa10.76□□□□□ -0.69
SLIRP-205ENST00000556310 HSD3B2P26439 372 aa10.76□□□□□ -0.69
SLIRP-205ENST00000556310 TLX1P31314 330 aaPredicted RBP10.76□□□□□ -0.69
SLIRP-205ENST00000556310 UQCRFS1P47985 274 aa10.76□□□□□ -0.69
SLIRP-205ENST00000556310 KRT6CP48668 564 aa10.76□□□□□ -0.69
SLIRP-205ENST00000556310 CLCN2P51788 898 aa10.76□□□□□ -0.69
SLIRP-205ENST00000556310 PKNOX1P55347 436 aa10.76□□□□□ -0.69
SLIRP-205ENST00000556310 NAA20P61599 178 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms