RNA–Protein interactions for RNA: ENST00000555904.1

ABCD4-223, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-223ENST00000555904 NKD1Q969G9 470 aa11.79□□□□□ -0.52
ABCD4-223ENST00000555904 GFM2Q969S9 779 aaKnown RBP11.79□□□□□ -0.52
ABCD4-223ENST00000555904 PPCDCQ96CD2 204 aa11.79□□□□□ -0.52
ABCD4-223ENST00000555904 TM4SF18Q96CE8 201 aa11.79□□□□□ -0.52
ABCD4-223ENST00000555904 MTERF3Q96E29 417 aa11.79□□□□□ -0.52
ABCD4-223ENST00000555904 CSF3RQ99062 836 aa11.79□□□□□ -0.52
ABCD4-223ENST00000555904 CRB3Q9BUF7 120 aa11.79□□□□□ -0.52
ABCD4-223ENST00000555904 BRINP2Q9C0B6 783 aa11.79□□□□□ -0.52
ABCD4-223ENST00000555904 CCDC86Q9H6F5 360 aaKnown RBP11.79□□□□□ -0.52
ABCD4-223ENST00000555904 REEP4Q9H6H4 257 aa11.79□□□□□ -0.52
ABCD4-223ENST00000555904 SOX17Q9H6I2 414 aaPredicted RBP11.79□□□□□ -0.52
ABCD4-223ENST00000555904 PRTFDC1Q9NRG1 225 aa11.79□□□□□ -0.52
ABCD4-223ENST00000555904 SDR39U1Q9NRG7 319 aaPredicted RBP11.79□□□□□ -0.52
ABCD4-223ENST00000555904 ENTPD4Q9Y227 616 aa11.79□□□□□ -0.52
ABCD4-223ENST00000555904 ARL2BPQ9Y2Y0 163 aa11.79□□□□□ -0.52
ABCD4-223ENST00000555904 PTRH2Q9Y3E5 179 aaKnown RBP11.79□□□□□ -0.52
ABCD4-223ENST00000555904 MMACHCQ9Y4U1 282 aa11.79□□□□□ -0.52
ABCD4-223ENST00000555904 PCDHA9Q9Y5H5 950 aa11.79□□□□□ -0.52
ABCD4-223ENST00000555904 ZNF780BQ9Y6R6 833 aa11.79□□□□□ -0.52
ABCD4-223ENST00000555904 VSTM2BA6NLU5 285 aa11.78□□□□□ -0.52
ABCD4-223ENST00000555904 IDSB3KWA1 339 aa11.78□□□□□ -0.52
ABCD4-223ENST00000555904 FAM227AF5H4B4 570 aa11.78□□□□□ -0.52
ABCD4-223ENST00000555904 PCDH17O14917 1159 aa11.78□□□□□ -0.52
ABCD4-223ENST00000555904 SCAMP2O15127 329 aaKnown RBP11.78□□□□□ -0.52
ABCD4-223ENST00000555904 DNAJB6O75190 326 aa11.78□□□□□ -0.52
ABCD4-223ENST00000555904 SLC22A3O75751 556 aa11.78□□□□□ -0.52
ABCD4-223ENST00000555904 PIK3R1P27986 724 aa11.78□□□□□ -0.52
ABCD4-223ENST00000555904 PTPN4P29074 926 aa11.78□□□□□ -0.52
ABCD4-223ENST00000555904 ATP4BP51164 291 aa11.78□□□□□ -0.52
ABCD4-223ENST00000555904 NME5P56597 212 aa11.78□□□□□ -0.52
ABCD4-223ENST00000555904 CLDN8P56748 225 aa11.78□□□□□ -0.52
ABCD4-223ENST00000555904 NSDHLQ15738 373 aa11.78□□□□□ -0.52
ABCD4-223ENST00000555904 DPY19L1Q2PZI1 675 aa11.78□□□□□ -0.52
ABCD4-223ENST00000555904 PDCD4Q53EL6 469 aaKnown RBP11.78□□□□□ -0.52
ABCD4-223ENST00000555904 FAM71E1Q6IPT2 247 aa11.78□□□□□ -0.52
ABCD4-223ENST00000555904 MRPL14Q6P1L8 145 aaKnown RBP11.78□□□□□ -0.52
ABCD4-223ENST00000555904 QSOX2Q6ZRP7 698 aa11.78□□□□□ -0.52
ABCD4-223ENST00000555904 SHISA6Q6ZSJ9 500 aa11.78□□□□□ -0.52
ABCD4-223ENST00000555904 PIGWQ7Z7B1 504 aa11.78□□□□□ -0.52
ABCD4-223ENST00000555904 DTX1Q86Y01 620 aa11.78□□□□□ -0.52
ABCD4-223ENST00000555904 GLB1L3Q8NCI6 653 aaPredicted RBP11.78□□□□□ -0.52
ABCD4-223ENST00000555904 CCDC197Q8NCU1 140 aa11.78□□□□□ -0.52
ABCD4-223ENST00000555904 OR4K14Q8NGD5 310 aa11.78□□□□□ -0.52
ABCD4-223ENST00000555904 OR2Y1Q8NGV0 311 aa11.78□□□□□ -0.52
ABCD4-223ENST00000555904 KLHL29Q96CT2 875 aa11.78□□□□□ -0.52
ABCD4-223ENST00000555904 VPS50Q96JG6 964 aa11.78□□□□□ -0.52
ABCD4-223ENST00000555904 EGLN2Q96KS0 407 aa11.78□□□□□ -0.52
ABCD4-223ENST00000555904 PTCHD1Q96NR3 888 aa11.78□□□□□ -0.52
ABCD4-223ENST00000555904 AKIRIN1Q9H9L7 192 aaPredicted RBP11.78□□□□□ -0.52
ABCD4-223ENST00000555904 ZIM2Q9NZV7 527 aa11.78□□□□□ -0.52
ABCD4-223ENST00000555904 HEY2Q9UBP5 337 aa11.78□□□□□ -0.52
ABCD4-223ENST00000555904 C19orf25Q9UFG5 118 aaPredicted RBP11.78□□□□□ -0.52
ABCD4-223ENST00000555904 C3orf18Q9UK00 162 aa11.78□□□□□ -0.52
ABCD4-223ENST00000555904 UTS2RQ9UKP6 389 aa11.78□□□□□ -0.52
ABCD4-223ENST00000555904 TCFL5Q9UL49 500 aa11.78□□□□□ -0.52
ABCD4-223ENST00000555904 FARSAQ9Y285 508 aaKnown RBP11.78□□□□□ -0.52
ABCD4-223ENST00000555904 GPR45Q9Y5Y3 372 aa11.78□□□□□ -0.52
ABCD4-223ENST00000555904 COPG1Q9Y678 874 aaKnown RBP11.78□□□□□ -0.52
ABCD4-223ENST00000555904 CNOT1A5YKK6 2376 aaKnown RBP11.77□□□□□ -0.52
ABCD4-223ENST00000555904 DYRK3O43781 588 aa11.77□□□□□ -0.53
ABCD4-223ENST00000555904 OR10H2O60403 315 aa11.77□□□□□ -0.53
ABCD4-223ENST00000555904 CTNSO60931 367 aa11.77□□□□□ -0.53
ABCD4-223ENST00000555904 JRKO75564 520 aa11.77□□□□□ -0.53
ABCD4-223ENST00000555904 PRKRAO75569 313 aaKnown RBP11.77□□□□□ -0.53
ABCD4-223ENST00000555904 ERAL1O75616 437 aaKnown RBP11.77□□□□□ -0.53
ABCD4-223ENST00000555904 DCTN3O75935 186 aa11.77□□□□□ -0.53
ABCD4-223ENST00000555904 IGHEP01854 428 aa11.77□□□□□ -0.53
ABCD4-223ENST00000555904 FURINP09958 794 aa11.77□□□□□ -0.53
ABCD4-223ENST00000555904 C8orf89P0DMQ9 161 aa11.77□□□□□ -0.53
ABCD4-223ENST00000555904 MAOAP21397 527 aa11.77□□□□□ -0.53
ABCD4-223ENST00000555904 NTSP30990 170 aa11.77□□□□□ -0.53
ABCD4-223ENST00000555904 EMP2P54851 167 aa11.77□□□□□ -0.53
ABCD4-223ENST00000555904 C21orf58P58505 322 aa11.77□□□□□ -0.53
ABCD4-223ENST00000555904 PLIN5Q00G26 463 aa11.77□□□□□ -0.53
ABCD4-223ENST00000555904 MC1RQ01726 317 aa11.77□□□□□ -0.53
ABCD4-223ENST00000555904 FOLH1Q04609 750 aa11.77□□□□□ -0.53
ABCD4-223ENST00000555904 BIKQ13323 160 aa11.77□□□□□ -0.53
ABCD4-223ENST00000555904 SERTAD2Q14140 314 aa11.77□□□□□ -0.53
ABCD4-223ENST00000555904 ERV3-1Q14264 604 aa11.77□□□□□ -0.53
ABCD4-223ENST00000555904 PGS1Q32NB8 556 aa11.77□□□□□ -0.53
ABCD4-223ENST00000555904 CPTPQ5TA50 214 aa11.77□□□□□ -0.53
ABCD4-223ENST00000555904 C6orf163Q5TEZ5 329 aa11.77□□□□□ -0.53
ABCD4-223ENST00000555904 MED25Q71SY5 747 aa11.77□□□□□ -0.53
ABCD4-223ENST00000555904 CLNKQ7Z7G1 428 aa11.77□□□□□ -0.53
ABCD4-223ENST00000555904 TICAM1Q8IUC6 712 aa11.77□□□□□ -0.53
ABCD4-223ENST00000555904 KRTCAP2Q8N6L1 136 aa11.77□□□□□ -0.53
ABCD4-223ENST00000555904 NATD1Q8N6N6 113 aa11.77□□□□□ -0.53
ABCD4-223ENST00000555904 SNIP1Q8TAD8 396 aaKnown RBP11.77□□□□□ -0.53
ABCD4-223ENST00000555904 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.77□□□□□ -0.53
ABCD4-223ENST00000555904 EXOSC8Q96B26 276 aaKnown RBP11.77□□□□□ -0.53
ABCD4-223ENST00000555904 TESCQ96BS2 214 aa11.77□□□□□ -0.53
ABCD4-223ENST00000555904 ZNF764Q96H86 408 aaPredicted RBP11.77□□□□□ -0.53
ABCD4-223ENST00000555904 BBS4Q96RK4 519 aa11.77□□□□□ -0.53
ABCD4-223ENST00000555904 SPSB2Q99619 263 aa11.77□□□□□ -0.53
ABCD4-223ENST00000555904 VN1R1Q9GZP7 353 aa11.77□□□□□ -0.53
ABCD4-223ENST00000555904 ACTL8Q9H568 366 aa11.77□□□□□ -0.53
ABCD4-223ENST00000555904 LANCL2Q9NS86 450 aa11.77□□□□□ -0.53
ABCD4-223ENST00000555904 SEMA3GQ9NS98 782 aa11.77□□□□□ -0.53
ABCD4-223ENST00000555904 TMEM45AQ9NWC5 275 aa11.77□□□□□ -0.53
ABCD4-223ENST00000555904 SH3BP4Q9P0V3 963 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms