RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 CUTCQ9NTM9 273 aa9.13□□□□□ -0.95
HNRNPC-220ENST00000555585 GIMAP4Q9NUV9 329 aa9.13□□□□□ -0.95
HNRNPC-220ENST00000555585 MS4A12Q9NXJ0 267 aa9.13□□□□□ -0.95
HNRNPC-220ENST00000555585 EHD3Q9NZN3 535 aa9.13□□□□□ -0.95
HNRNPC-220ENST00000555585 TMEM181Q9P2C4 612 aa9.13□□□□□ -0.95
HNRNPC-220ENST00000555585 PDP2Q9P2J9 529 aa9.13□□□□□ -0.95
HNRNPC-220ENST00000555585 UTS2RQ9UKP6 389 aa9.13□□□□□ -0.95
HNRNPC-220ENST00000555585 PSME2Q9UL46 239 aa9.13□□□□□ -0.95
HNRNPC-220ENST00000555585 DAPP1Q9UN19 280 aa9.13□□□□□ -0.95
HNRNPC-220ENST00000555585 VPS4AQ9UN37 437 aa9.13□□□□□ -0.95
HNRNPC-220ENST00000555585 ENTPD4Q9Y227 616 aa9.13□□□□□ -0.95
HNRNPC-220ENST00000555585 PCDHB14Q9Y5E9 798 aa9.13□□□□□ -0.95
HNRNPC-220ENST00000555585 CROCCQ5TZA2 2017 aa9.13□□□□□ -0.95
HNRNPC-220ENST00000555585 FITM1A5D6W6 292 aa9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 WASHC1A8K0Z3 465 aa9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 A8MUI8 341 aa9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 EVPLLA8MZ36 301 aa9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 D6RAR5 112 aa9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 NTN3O00634 580 aaPredicted RBP9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 NME4O00746 187 aa9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 PGRMC2O15173 223 aa9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 CHST10O43529 356 aa9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 FOXS1O43638 330 aa9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 SORBS2O94875 1100 aaKnown RBP9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 MED26O95402 600 aa9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 NSA2O95478 260 aaKnown RBP9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 C8orf89P0DMQ9 161 aa9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 ALAS2P22557 587 aa9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 SLC6A2P23975 617 aa9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 CSTF2P33240 577 aaKnown RBP eCLIP9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 SOAT1P35610 550 aa9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 NBL1P41271 181 aa9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 HNRNPFP52597 415 aaKnown RBP9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 MANFP55145 182 aaKnown RBP9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 RAB38P57729 211 aa9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 EEFSECP57772 596 aaKnown RBP9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 MTPNP58546 118 aa9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 ELF3P78545 371 aaPredicted RBP9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 SIM1P81133 766 aaPredicted RBP9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 SHC2P98077 582 aa9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 CEACAM7Q14002 265 aa9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 FAM53BQ14153 422 aa9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 MPEG1Q2M385 716 aa9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 RUNDC3AQ59EK9 446 aa9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 PIGGQ5H8A4 983 aa9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 RABL3Q5HYI8 236 aa9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 C1orf146Q5VVC0 180 aa9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 SLC48A1Q6P1K1 146 aa9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 TLDC1Q6P9B6 456 aa9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 TTLL10Q6ZVT0 673 aa9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 KIAA2013Q8IYS2 634 aa9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 ARHGEF39Q8N4T4 335 aa9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 DTWD1Q8N5C7 304 aa9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 ZFP28Q8NHY6 868 aa9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 OR5P2Q8WZ92 322 aa9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 CCDC124Q96CT7 223 aaKnown RBP9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 ZNF501Q96CX3 271 aaPredicted RBP9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 MMABQ96EY8 250 aaPredicted RBP9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 ZNF764Q96H86 408 aaPredicted RBP9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 ANKRD27Q96NW4 1050 aa9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 OR6C1Q96RD1 312 aa9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 CSF3RQ99062 836 aa9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 CDC6Q99741 560 aa9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 SH3GL1Q99961 368 aa9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 ECSITQ9BQ95 431 aa9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 THUMPD3Q9BV44 507 aaKnown RBP9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 YIPF2Q9BWQ6 316 aa9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 PIF1Q9H611 641 aa9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 RPF2Q9H7B2 306 aaKnown RBP9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 SLC35C2Q9NQQ7 365 aa9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 CMTM6Q9NX76 183 aa9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 SLC25A37Q9NYZ2 338 aa9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 KCMF1Q9P0J7 381 aa9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 VAPAQ9P0L0 249 aa9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 HCN3Q9P1Z3 774 aa9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 SLC7A8Q9UHI5 535 aa9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 CDC14AQ9UNH5 594 aa9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 ZNF780BQ9Y6R6 833 aa9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 ASXL3Q9C0F0 2248 aa9.12□□□□□ -0.95
HNRNPC-220ENST00000555585 TRBV5-3A0A0A0MS03 114 aa9.11□□□□□ -0.95
HNRNPC-220ENST00000555585 FAM227AF5H4B4 570 aa9.11□□□□□ -0.95
HNRNPC-220ENST00000555585 CLIC1O00299 241 aa9.11□□□□□ -0.95
HNRNPC-220ENST00000555585 ZNF749O43361 778 aa9.11□□□□□ -0.95
HNRNPC-220ENST00000555585 STAMBPO95630 424 aa9.11□□□□□ -0.95
HNRNPC-220ENST00000555585 MSL3P1P0C860 447 aa9.11□□□□□ -0.95
HNRNPC-220ENST00000555585 RNH1P13489 461 aaKnown RBP9.11□□□□□ -0.95
HNRNPC-220ENST00000555585 CSNK2A2P19784 350 aaPredicted RBP9.11□□□□□ -0.95
HNRNPC-220ENST00000555585 GPC1P35052 558 aa9.11□□□□□ -0.95
HNRNPC-220ENST00000555585 MSX2P35548 267 aaPredicted RBP9.11□□□□□ -0.95
HNRNPC-220ENST00000555585 FEN1P39748 380 aaKnown RBP9.11□□□□□ -0.95
HNRNPC-220ENST00000555585 NCBP2P52298 156 aaKnown RBP eCLIP9.11□□□□□ -0.95
HNRNPC-220ENST00000555585 ARSFP54793 590 aa9.11□□□□□ -0.95
HNRNPC-220ENST00000555585 HBA1P69905 142 aa9.11□□□□□ -0.95
HNRNPC-220ENST00000555585 MAT1AQ00266 395 aaKnown RBP9.11□□□□□ -0.95
HNRNPC-220ENST00000555585 LIPEQ05469 1076 aa9.11□□□□□ -0.95
HNRNPC-220ENST00000555585 HSPB3Q12988 150 aa9.11□□□□□ -0.95
HNRNPC-220ENST00000555585 TRA2AQ13595 282 aaKnown RBP eCLIP9.11□□□□□ -0.951e-7■■■□□ 14.9
HNRNPC-220ENST00000555585 SELPLGQ14242 412 aa9.11□□□□□ -0.95
HNRNPC-220ENST00000555585 OR52E8Q6IFG1 317 aa9.11□□□□□ -0.95
HNRNPC-220ENST00000555585 ZNF551Q7Z340 670 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms