RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 SAP25Q8TEE9 199 aa1.73□□□□□ -2.13
SRP54-207ENST00000555535 FAM122AQ96E09 287 aa1.73□□□□□ -2.13
SRP54-207ENST00000555535 IMMP1LQ96LU5 166 aa1.73□□□□□ -2.13
SRP54-207ENST00000555535 PRMT1Q99873 361 aaKnown RBP1.73□□□□□ -2.13
SRP54-207ENST00000555535 TTYH2Q9BSA4 534 aa1.73□□□□□ -2.13
SRP54-207ENST00000555535 CCM2Q9BSQ5 444 aa1.73□□□□□ -2.13
SRP54-207ENST00000555535 NACAP1Q9BZK3 213 aa1.73□□□□□ -2.13
SRP54-207ENST00000555535 MTIF3Q9H2K0 278 aaKnown RBP1.73□□□□□ -2.13
SRP54-207ENST00000555535 KLRF1Q9NZS2 232 aa1.73□□□□□ -2.13
SRP54-207ENST00000555535 KLK12Q9UKR0 248 aa1.73□□□□□ -2.13
SRP54-207ENST00000555535 NEU3Q9UQ49 428 aa1.73□□□□□ -2.13
SRP54-207ENST00000555535 KIR2DL5BA0A0G2JN68 375 aa1.72□□□□□ -2.13
SRP54-207ENST00000555535 KIR2DL5BA0A0G2JPC4 375 aa1.72□□□□□ -2.13
SRP54-207ENST00000555535 TMCO5BA8MYB1 307 aa1.72□□□□□ -2.13
SRP54-207ENST00000555535 FLRT2O43155 660 aa1.72□□□□□ -2.13
SRP54-207ENST00000555535 GPAA1O43292 621 aa1.72□□□□□ -2.13
SRP54-207ENST00000555535 MOCS2O96007 188 aaPredicted RBP1.72□□□□□ -2.13
SRP54-207ENST00000555535 KRT3P12035 628 aa1.72□□□□□ -2.13
SRP54-207ENST00000555535 P4HA1P13674 534 aa1.72□□□□□ -2.13
SRP54-207ENST00000555535 LBPP18428 481 aa1.72□□□□□ -2.13
SRP54-207ENST00000555535 PAX3P23760 479 aa1.72□□□□□ -2.13
SRP54-207ENST00000555535 FHITP49789 147 aa1.72□□□□□ -2.13
SRP54-207ENST00000555535 CEACAM7Q14002 265 aa1.72□□□□□ -2.13
SRP54-207ENST00000555535 EBI3Q14213 229 aa1.72□□□□□ -2.13
SRP54-207ENST00000555535 ANKRD55Q3KP44 614 aa1.72□□□□□ -2.13
SRP54-207ENST00000555535 SPATA1Q5VX52 437 aa1.72□□□□□ -2.13
SRP54-207ENST00000555535 CST9LP1Q5W188 147 aa1.72□□□□□ -2.13
SRP54-207ENST00000555535 WDR25Q64LD2 544 aaPredicted RBP1.72□□□□□ -2.13
SRP54-207ENST00000555535 IRGCQ6NXR0 463 aa1.72□□□□□ -2.13
SRP54-207ENST00000555535 ABRAXAS1Q6UWZ7 409 aa1.72□□□□□ -2.13
SRP54-207ENST00000555535 ZNF677Q86XU0 584 aa1.72□□□□□ -2.13
SRP54-207ENST00000555535 MKXQ8IYA7 352 aa1.72□□□□□ -2.13
SRP54-207ENST00000555535 KIR2DL5AQ8N109 375 aa1.72□□□□□ -2.13
SRP54-207ENST00000555535 ELMOD1Q8N336 334 aa1.72□□□□□ -2.13
SRP54-207ENST00000555535 RAD54LQ92698 747 aa1.72□□□□□ -2.13
SRP54-207ENST00000555535 PGAP3Q96FM1 320 aaPredicted RBP1.72□□□□□ -2.13
SRP54-207ENST00000555535 AK8Q96MA6 479 aa1.72□□□□□ -2.13
SRP54-207ENST00000555535 CASD1Q96PB1 797 aa1.72□□□□□ -2.13
SRP54-207ENST00000555535 CHRDL1Q9BU40 450 aa1.72□□□□□ -2.13
SRP54-207ENST00000555535 ABCC13Q9NSE7 274 aa1.72□□□□□ -2.13
SRP54-207ENST00000555535 MED17Q9NVC6 651 aa1.72□□□□□ -2.13
SRP54-207ENST00000555535 MLXQ9UH92 298 aa1.72□□□□□ -2.13
SRP54-207ENST00000555535 NOCTQ9UK39 431 aaKnown RBP1.72□□□□□ -2.13
SRP54-207ENST00000555535 TNRQ92752 1358 aa1.72□□□□□ -2.13
SRP54-207ENST00000555535 ARHGAP23Q9P227 1491 aa1.71□□□□□ -2.14
SRP54-207ENST00000555535 OTOGLQ3ZCN5 2332 aa1.71□□□□□ -2.14
SRP54-207ENST00000555535 DUSP14O95147 198 aaKnown RBP1.71□□□□□ -2.14
SRP54-207ENST00000555535 ANKRD34CP0C6C1 535 aa1.71□□□□□ -2.14
SRP54-207ENST00000555535 LAMP1P11279 417 aa1.71□□□□□ -2.14
SRP54-207ENST00000555535 PSMA3P25788 255 aa1.71□□□□□ -2.14
SRP54-207ENST00000555535 PPP2R1AP30153 589 aa1.71□□□□□ -2.14
SRP54-207ENST00000555535 OR3A1P47881 315 aa1.71□□□□□ -2.14
SRP54-207ENST00000555535 RPP38P78345 283 aaKnown RBP1.71□□□□□ -2.14
SRP54-207ENST00000555535 SLC17A1Q14916 467 aa1.71□□□□□ -2.14
SRP54-207ENST00000555535 CNPY1Q3B7I2 92 aa1.71□□□□□ -2.14
SRP54-207ENST00000555535 OTPQ5XKR4 325 aa1.71□□□□□ -2.14
SRP54-207ENST00000555535 C2orf66Q6UXQ4 117 aa1.71□□□□□ -2.14
SRP54-207ENST00000555535 PPP1R21Q6ZMI0 780 aa1.71□□□□□ -2.14
SRP54-207ENST00000555535 ZNF730Q6ZMV8 503 aa1.71□□□□□ -2.14
SRP54-207ENST00000555535 TGIF2LYQ8IUE0 185 aa1.71□□□□□ -2.14
SRP54-207ENST00000555535 APOBEC3FQ8IUX4 373 aaKnown RBP1.71□□□□□ -2.14
SRP54-207ENST00000555535 FBXW8Q8N3Y1 598 aa1.71□□□□□ -2.14
SRP54-207ENST00000555535 ST6GALNAC6Q969X2 333 aa1.71□□□□□ -2.14
SRP54-207ENST00000555535 EXOC4Q96A65 974 aa1.71□□□□□ -2.14
SRP54-207ENST00000555535 C16orf74Q96GX8 76 aa1.71□□□□□ -2.14
SRP54-207ENST00000555535 RMDN2Q96LZ7 410 aa1.71□□□□□ -2.14
SRP54-207ENST00000555535 ST6GALNAC4Q9H4F1 302 aa1.71□□□□□ -2.14
SRP54-207ENST00000555535 SPG21Q9NZD8 308 aa1.71□□□□□ -2.14
SRP54-207ENST00000555535 CA5BQ9Y2D0 317 aa1.71□□□□□ -2.14
SRP54-207ENST00000555535 LIPGQ9Y5X9 500 aa1.71□□□□□ -2.14
SRP54-207ENST00000555535 GAKO14976 1311 aa1.7□□□□□ -2.14
SRP54-207ENST00000555535 PPIP5K2O43314 1243 aa1.7□□□□□ -2.14
SRP54-207ENST00000555535 FCGR3BO75015 233 aa1.7□□□□□ -2.14
SRP54-207ENST00000555535 DUSP11O75319 330 aaKnown RBP1.7□□□□□ -2.14
SRP54-207ENST00000555535 PDGFBP01127 241 aaPredicted RBP1.7□□□□□ -2.14
SRP54-207ENST00000555535 ADRB2P07550 413 aa1.7□□□□□ -2.14
SRP54-207ENST00000555535 LYNP07948 512 aa1.7□□□□□ -2.14
SRP54-207ENST00000555535 FCGR3AP08637 254 aa1.7□□□□□ -2.14
SRP54-207ENST00000555535 MYBL1P10243 752 aa1.7□□□□□ -2.14
SRP54-207ENST00000555535 VDRP11473 427 aa1.7□□□□□ -2.14
SRP54-207ENST00000555535 ACKR3P25106 362 aa1.7□□□□□ -2.14
SRP54-207ENST00000555535 CRKLP46109 303 aaKnown RBP1.7□□□□□ -2.14
SRP54-207ENST00000555535 RIPPLY3P57055 190 aa1.7□□□□□ -2.14
SRP54-207ENST00000555535 GSTO1P78417 241 aa1.7□□□□□ -2.14
SRP54-207ENST00000555535 TFDP3Q5H9I0 405 aa1.7□□□□□ -2.14
SRP54-207ENST00000555535 ZNF776Q68DI1 518 aaPredicted RBP1.7□□□□□ -2.14
SRP54-207ENST00000555535 GPR139Q6DWJ6 353 aa1.7□□□□□ -2.14
SRP54-207ENST00000555535 MZT2BQ6NZ67 158 aa1.7□□□□□ -2.14
SRP54-207ENST00000555535 TMEM99Q8N816 258 aa1.7□□□□□ -2.14
SRP54-207ENST00000555535 OR13F1Q8NGS4 319 aa1.7□□□□□ -2.14
SRP54-207ENST00000555535 SETD7Q8WTS6 366 aaKnown RBP1.7□□□□□ -2.14
SRP54-207ENST00000555535 ZNF274Q96GC6 653 aaPredicted RBP1.7□□□□□ -2.14
SRP54-207ENST00000555535 PIWIL1Q96J94 861 aaKnown RBP1.7□□□□□ -2.14
SRP54-207ENST00000555535 ERGIC2Q96RQ1 377 aa1.7□□□□□ -2.14
SRP54-207ENST00000555535 FAM129AQ9BZQ8 928 aa1.7□□□□□ -2.14
SRP54-207ENST00000555535 ANKRD2Q9GZV1 360 aa1.7□□□□□ -2.14
SRP54-207ENST00000555535 IL1RL2Q9HB29 575 aa1.7□□□□□ -2.14
SRP54-207ENST00000555535 S100A14Q9HCY8 104 aa1.7□□□□□ -2.14
SRP54-207ENST00000555535 KLHL21Q9UJP4 597 aa1.7□□□□□ -2.14
SRP54-207ENST00000555535 EXOC6BQ9Y2D4 811 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms