RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 IGLV3-21P80748 117 aaPredicted RBP11.92□□□□□ -0.5
SYNE2-219ENST00000555323 MC1RQ01726 317 aa11.92□□□□□ -0.5
SYNE2-219ENST00000555323 TLE3Q04726 772 aa11.92□□□□□ -0.5
SYNE2-219ENST00000555323 UGT8Q16880 541 aa11.92□□□□□ -0.5
SYNE2-219ENST00000555323 FAM69BQ5VUD6 431 aa11.92□□□□□ -0.5
SYNE2-219ENST00000555323 IL23RQ5VWK5 629 aa11.92□□□□□ -0.5
SYNE2-219ENST00000555323 LRRC69Q6ZNQ3 347 aa11.92□□□□□ -0.5
SYNE2-219ENST00000555323 IKBIPQ70UQ0 350 aa11.92□□□□□ -0.5
SYNE2-219ENST00000555323 EFCAB3Q8N7B9 438 aa11.92□□□□□ -0.5
SYNE2-219ENST00000555323 FAM47BQ8NA70 645 aa11.92□□□□□ -0.5
SYNE2-219ENST00000555323 STARD8Q92502 1023 aa11.92□□□□□ -0.5
SYNE2-219ENST00000555323 UCN3Q969E3 161 aa11.92□□□□□ -0.5
SYNE2-219ENST00000555323 ANKRD9Q96BM1 317 aaPredicted RBP11.92□□□□□ -0.5
SYNE2-219ENST00000555323 CHMP6Q96FZ7 201 aa11.92□□□□□ -0.5
SYNE2-219ENST00000555323 ZNF764Q96H86 408 aaPredicted RBP11.92□□□□□ -0.5
SYNE2-219ENST00000555323 EGLN2Q96KS0 407 aa11.92□□□□□ -0.5
SYNE2-219ENST00000555323 PTCHD1Q96NR3 888 aa11.92□□□□□ -0.5
SYNE2-219ENST00000555323 IP6K3Q96PC2 410 aa11.92□□□□□ -0.5
SYNE2-219ENST00000555323 EBF4Q9BQW3 602 aa11.92□□□□□ -0.5
SYNE2-219ENST00000555323 CRB3Q9BUF7 120 aa11.92□□□□□ -0.5
SYNE2-219ENST00000555323 CCDC28BQ9BUN5 200 aa11.92□□□□□ -0.5
SYNE2-219ENST00000555323 FAIM2Q9BWQ8 316 aa11.92□□□□□ -0.5
SYNE2-219ENST00000555323 EBPLQ9BY08 206 aa11.92□□□□□ -0.5
SYNE2-219ENST00000555323 TRIM55Q9BYV6 548 aa11.92□□□□□ -0.5
SYNE2-219ENST00000555323 WDR41Q9HAD4 459 aa11.92□□□□□ -0.5
SYNE2-219ENST00000555323 NOP53Q9NZM5 478 aaKnown RBP11.92□□□□□ -0.5
SYNE2-219ENST00000555323 EHD3Q9NZN3 535 aa11.92□□□□□ -0.5
SYNE2-219ENST00000555323 HEY2Q9UBP5 337 aa11.92□□□□□ -0.5
SYNE2-219ENST00000555323 EXO1Q9UQ84 846 aaKnown RBP11.92□□□□□ -0.5
SYNE2-219ENST00000555323 EIF3LQ9Y262 564 aaKnown RBP11.92□□□□□ -0.5
SYNE2-219ENST00000555323 MRPS18BQ9Y676 258 aaKnown RBP11.92□□□□□ -0.5
SYNE2-219ENST00000555323 APC2O95996 2303 aa11.91□□□□□ -0.5
SYNE2-219ENST00000555323 GOLGA8QA0A0J9YX86 632 aa11.91□□□□□ -0.5
SYNE2-219ENST00000555323 TCRBV16S1A1N1A0A5B0 115 aa11.91□□□□□ -0.5
SYNE2-219ENST00000555323 GOLGA8OA6NCC3 632 aa11.91□□□□□ -0.5
SYNE2-219ENST00000555323 GMNCA6NCL1 334 aa11.91□□□□□ -0.5
SYNE2-219ENST00000555323 OR2W5A6NFC9 320 aa11.91□□□□□ -0.5
SYNE2-219ENST00000555323 WASHC1A8K0Z3 465 aa11.91□□□□□ -0.5
SYNE2-219ENST00000555323 GOLGA8NF8WBI6 632 aa11.91□□□□□ -0.5
SYNE2-219ENST00000555323 POLR3GO15318 223 aaPredicted RBP11.91□□□□□ -0.5
SYNE2-219ENST00000555323 TBX19O60806 448 aa11.91□□□□□ -0.5
SYNE2-219ENST00000555323 DIAPH2O60879 1101 aa11.91□□□□□ -0.5
SYNE2-219ENST00000555323 ALOX12BO75342 701 aa11.91□□□□□ -0.5
SYNE2-219ENST00000555323 CDC123O75794 336 aaPredicted RBP11.91□□□□□ -0.5
SYNE2-219ENST00000555323 GPR75O95800 540 aa11.91□□□□□ -0.5
SYNE2-219ENST00000555323 IL3P08700 152 aa11.91□□□□□ -0.5
SYNE2-219ENST00000555323 NR2F6P10588 404 aa11.91□□□□□ -0.5
SYNE2-219ENST00000555323 G6PDP11413 515 aa11.91□□□□□ -0.5
SYNE2-219ENST00000555323 DDCP20711 480 aa11.91□□□□□ -0.5
SYNE2-219ENST00000555323 PPP2R1BP30154 601 aa11.91□□□□□ -0.5
SYNE2-219ENST00000555323 CLDN8P56748 225 aa11.91□□□□□ -0.5
SYNE2-219ENST00000555323 C21orf58P58505 322 aa11.91□□□□□ -0.5
SYNE2-219ENST00000555323 C2orf80Q0P641 193 aa11.91□□□□□ -0.5
SYNE2-219ENST00000555323 IL10RAQ13651 578 aa11.91□□□□□ -0.5
SYNE2-219ENST00000555323 NSDHLQ15738 373 aa11.91□□□□□ -0.5
SYNE2-219ENST00000555323 CEBPEQ15744 281 aa11.91□□□□□ -0.5
SYNE2-219ENST00000555323 LSM12Q3MHD2 195 aaKnown RBP11.91□□□□□ -0.5
SYNE2-219ENST00000555323 MINDY4Q4G0A6 757 aa11.91□□□□□ -0.5
SYNE2-219ENST00000555323 CGB2Q6NT52 195 aa11.91□□□□□ -0.5
SYNE2-219ENST00000555323 SLC48A1Q6P1K1 146 aa11.91□□□□□ -0.5
SYNE2-219ENST00000555323 SHISA6Q6ZSJ9 500 aa11.91□□□□□ -0.5
SYNE2-219ENST00000555323 FAM9CQ8IZT9 166 aa11.91□□□□□ -0.5
SYNE2-219ENST00000555323 TMEM132CQ8N3T6 1108 aa11.91□□□□□ -0.5
SYNE2-219ENST00000555323 RFWD2Q8NHY2 731 aa11.91□□□□□ -0.5
SYNE2-219ENST00000555323 SNRNP27Q8WVK2 155 aaKnown RBP11.91□□□□□ -0.5
SYNE2-219ENST00000555323 OR52B2Q96RD2 323 aa11.91□□□□□ -0.5
SYNE2-219ENST00000555323 TCF7L2Q9NQB0 619 aa11.91□□□□□ -0.5
SYNE2-219ENST00000555323 NECTIN3Q9NQS3 549 aa11.91□□□□□ -0.5
SYNE2-219ENST00000555323 BAIAP2L1Q9UHR4 511 aa11.91□□□□□ -0.5
SYNE2-219ENST00000555323 PSME2Q9UL46 239 aa11.91□□□□□ -0.5
SYNE2-219ENST00000555323 HS3ST3B1Q9Y662 390 aa11.91□□□□□ -0.5
SYNE2-219ENST00000555323 SRRM3A6NNA2 597 aaPredicted RBP11.9□□□□□ -0.5
SYNE2-219ENST00000555323 ZNF891A8MT65 544 aaPredicted RBP11.9□□□□□ -0.5
SYNE2-219ENST00000555323 TGFBR3LH3BV60 316 aa11.9□□□□□ -0.5
SYNE2-219ENST00000555323 K7ENP7 123 aa11.9□□□□□ -0.5
SYNE2-219ENST00000555323 SOCS6O14544 535 aa11.9□□□□□ -0.5
SYNE2-219ENST00000555323 ANKRD28O15084 1053 aa11.9□□□□□ -0.5
SYNE2-219ENST00000555323 NKX2-8O15522 239 aa11.9□□□□□ -0.5
SYNE2-219ENST00000555323 FURINP09958 794 aa11.9□□□□□ -0.5
SYNE2-219ENST00000555323 ALDOCP09972 364 aaKnown RBP11.9□□□□□ -0.5
SYNE2-219ENST00000555323 C8orf89P0DMQ9 161 aa11.9□□□□□ -0.5
SYNE2-219ENST00000555323 TROVE2P10155 538 aaKnown RBP eCLIP11.9□□□□□ -0.5
SYNE2-219ENST00000555323 MRPL19P49406 292 aaKnown RBP11.9□□□□□ -0.5
SYNE2-219ENST00000555323 DIO3P55073 304 aa11.9□□□□□ -0.5
SYNE2-219ENST00000555323 UCNP55089 124 aa11.9□□□□□ -0.5
SYNE2-219ENST00000555323 IRX1P78414 480 aaPredicted RBP11.9□□□□□ -0.5
SYNE2-219ENST00000555323 FOLH1Q04609 750 aa11.9□□□□□ -0.5
SYNE2-219ENST00000555323 ACACAQ13085 2346 aa11.9□□□□□ -0.5
SYNE2-219ENST00000555323 PDE7AQ13946 482 aa11.9□□□□□ -0.5
SYNE2-219ENST00000555323 SERTAD2Q14140 314 aa11.9□□□□□ -0.5
SYNE2-219ENST00000555323 METTL21CQ5VZV1 264 aa11.9□□□□□ -0.5
SYNE2-219ENST00000555323 OR52E8Q6IFG1 317 aa11.9□□□□□ -0.5
SYNE2-219ENST00000555323 INO80CQ6PI98 192 aaPredicted RBP11.9□□□□□ -0.5
SYNE2-219ENST00000555323 KIRREL2Q6UWL6 708 aa11.9□□□□□ -0.5
SYNE2-219ENST00000555323 ACAD11Q709F0 780 aa11.9□□□□□ -0.5
SYNE2-219ENST00000555323 PPP1R32Q7Z5V6 425 aa11.9□□□□□ -0.5
SYNE2-219ENST00000555323 RAB43Q86YS6 212 aa11.9□□□□□ -0.5
SYNE2-219ENST00000555323 RIMKLAQ8IXN7 391 aa11.9□□□□□ -0.5
SYNE2-219ENST00000555323 PRSS58Q8IYP2 241 aa11.9□□□□□ -0.5
SYNE2-219ENST00000555323 LIX1Q8N485 282 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms