RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 SERINC2Q96SA4 455 aa10.15□□□□□ -0.78
TDP1-211ENST00000555178 CMKLR1Q99788 373 aa10.15□□□□□ -0.78
TDP1-211ENST00000555178 BTBD10Q9BSF8 475 aa10.15□□□□□ -0.78
TDP1-211ENST00000555178 DUSP26Q9BV47 211 aa10.15□□□□□ -0.78
TDP1-211ENST00000555178 CADM1Q9BY67 442 aaKnown RBP10.15□□□□□ -0.78
TDP1-211ENST00000555178 ANKHQ9HCJ1 492 aa10.15□□□□□ -0.78
TDP1-211ENST00000555178 MIEF1Q9NQG6 463 aa10.15□□□□□ -0.78
TDP1-211ENST00000555178 FBXO8Q9NRD0 319 aa10.15□□□□□ -0.78
TDP1-211ENST00000555178 ENAMQ9NRM1 1142 aa10.15□□□□□ -0.78
TDP1-211ENST00000555178 MRGBPQ9NV56 204 aa10.15□□□□□ -0.78
TDP1-211ENST00000555178 ATP6V1HQ9UI12 483 aa10.15□□□□□ -0.78
TDP1-211ENST00000555178 DAPP1Q9UN19 280 aa10.15□□□□□ -0.78
TDP1-211ENST00000555178 PCSK5Q92824 1860 aa10.15□□□□□ -0.78
TDP1-211ENST00000555178 TGFBR3LH3BV60 316 aa10.15□□□□□ -0.78
TDP1-211ENST00000555178 PLD2O14939 933 aa10.15□□□□□ -0.78
TDP1-211ENST00000555178 CFLARO15519 480 aa10.15□□□□□ -0.78
TDP1-211ENST00000555178 PROM1O43490 865 aa10.15□□□□□ -0.78
TDP1-211ENST00000555178 PRMT3O60678 531 aa10.15□□□□□ -0.78
TDP1-211ENST00000555178 CDC123O75794 336 aaPredicted RBP10.15□□□□□ -0.78
TDP1-211ENST00000555178 IL6P05231 212 aa10.15□□□□□ -0.78
TDP1-211ENST00000555178 TSFMP43897 325 aaKnown RBP10.15□□□□□ -0.78
TDP1-211ENST00000555178 IRX1P78414 480 aaPredicted RBP10.15□□□□□ -0.78
TDP1-211ENST00000555178 ID2Q02363 134 aa10.15□□□□□ -0.78
TDP1-211ENST00000555178 STX5Q13190 355 aa10.15□□□□□ -0.78
TDP1-211ENST00000555178 ART3Q13508 389 aa10.15□□□□□ -0.78
TDP1-211ENST00000555178 MANEAQ5SRI9 462 aa10.15□□□□□ -0.78
TDP1-211ENST00000555178 SHISA6Q6ZSJ9 500 aa10.15□□□□□ -0.78
TDP1-211ENST00000555178 IKBIPQ70UQ0 350 aa10.15□□□□□ -0.78
TDP1-211ENST00000555178 LAPTM4BQ86VI4 370 aa10.15□□□□□ -0.78
TDP1-211ENST00000555178 OR4N5Q8IXE1 308 aa10.15□□□□□ -0.78
TDP1-211ENST00000555178 MSRB3Q8IXL7 192 aa10.15□□□□□ -0.78
TDP1-211ENST00000555178 GPR135Q8IZ08 494 aa10.15□□□□□ -0.78
TDP1-211ENST00000555178 AURKBQ96GD4 344 aaPredicted RBP10.15□□□□□ -0.78
TDP1-211ENST00000555178 PEX11GQ96HA9 241 aa10.15□□□□□ -0.78
TDP1-211ENST00000555178 GBP5Q96PP8 586 aa10.15□□□□□ -0.78
TDP1-211ENST00000555178 TUBB6Q9BUF5 446 aa10.15□□□□□ -0.78
TDP1-211ENST00000555178 ACTR5Q9H9F9 607 aaPredicted RBP10.15□□□□□ -0.78
TDP1-211ENST00000555178 EFCAB1Q9HAE3 211 aa10.15□□□□□ -0.78
TDP1-211ENST00000555178 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.15□□□□□ -0.78
TDP1-211ENST00000555178 LEF1Q9UJU2 399 aaPredicted RBP10.15□□□□□ -0.78
TDP1-211ENST00000555178 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.15□□□□□ -0.78
TDP1-211ENST00000555178 CCDC187A0A096LP49 1063 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 BBIP1A8MTZ0 92 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 ATP5HO75947 161 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 PDE5AO76074 875 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 C8orf89P0DMQ9 161 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 RORAP35398 523 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 BTG2P78543 158 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 TNFRSF17Q02223 184 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 NFYCQ13952 458 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 SELPLGQ14242 412 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 MAPKAPK3Q16644 382 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 VWA2Q5GFL6 755 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 DLEU7Q6UYE1 221 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 DHDDSQ86SQ9 333 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 PRSS58Q8IYP2 241 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 FAM9CQ8IZT9 166 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 RNF148Q8N7C7 305 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 OR8J2Q8NGG1 315 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 COQ8BQ96D53 544 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 NDC1Q9BTX1 674 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 TMEM121BQ9BXQ6 578 aaPredicted RBP10.14□□□□□ -0.79
TDP1-211ENST00000555178 WDR41Q9HAD4 459 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 SLC25A37Q9NYZ2 338 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 VAPAQ9P0L0 249 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 CTSFQ9UBX1 484 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 KLK13Q9UKR3 277 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 PCDHGA7Q9Y5G6 932 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 B4E171 279 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 CYR61O00622 381 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 TXNDC9O14530 226 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 DSCR3O14972 297 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 GSC2O15499 205 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 ERAL1O75616 437 aaKnown RBP10.14□□□□□ -0.79
TDP1-211ENST00000555178 NSA2O95478 260 aaKnown RBP10.14□□□□□ -0.79
TDP1-211ENST00000555178 CPSF4O95639 269 aaKnown RBP10.14□□□□□ -0.79
TDP1-211ENST00000555178 C6orf47O95873 294 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 ABCB1P08183 1280 aaPredicted RBP10.14□□□□□ -0.79
TDP1-211ENST00000555178 KRT16P08779 473 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 NR2F6P10588 404 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 CPN2P22792 545 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 PTPN6P29350 595 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 TSPAN7P41732 249 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 ARFIP1P53367 373 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 CAMK2BQ13554 666 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 FAM53BQ14153 422 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 HEPACAMQ14CZ8 416 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 C8orf82Q6P1X6 216 aaPredicted RBP10.14□□□□□ -0.79
TDP1-211ENST00000555178 TLDC1Q6P9B6 456 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 TMPRSS7Q7RTY8 843 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 CAMKMTQ7Z624 323 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 TTC29Q8NA56 475 aaPredicted RBP10.14□□□□□ -0.79
TDP1-211ENST00000555178 GALNT6Q8NCL4 622 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 DNAJB14Q8TBM8 379 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 LRRC58Q96CX6 371 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 CLIP3Q96DZ5 547 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 CNRIP1Q96F85 164 aaPredicted RBP10.14□□□□□ -0.79
TDP1-211ENST00000555178 THTPAQ9BU02 230 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 SPRY4Q9C004 299 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 STRADBQ9C0K7 418 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms