RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 RFC4P35249 363 aa4.72□□□□□ -1.65
VRK1-203ENST00000555067 DLSTP36957 453 aa4.72□□□□□ -1.65
VRK1-203ENST00000555067 MAGEA11P43364 429 aa4.72□□□□□ -1.65
VRK1-203ENST00000555067 NR2C2P49116 596 aa4.72□□□□□ -1.65
VRK1-203ENST00000555067 TNFSF10P50591 281 aa4.72□□□□□ -1.65
VRK1-203ENST00000555067 HERV-K104P63124 156 aa4.72□□□□□ -1.65
VRK1-203ENST00000555067 MECOMQ03112 1051 aa4.72□□□□□ -1.65
VRK1-203ENST00000555067 SLC3A1Q07837 685 aa4.72□□□□□ -1.65
VRK1-203ENST00000555067 DMPKQ09013 629 aa4.72□□□□□ -1.65
VRK1-203ENST00000555067 ZNF876PQ49A33 203 aa4.72□□□□□ -1.65
VRK1-203ENST00000555067 ZC2HC1CQ53FD0 456 aaPredicted RBP4.72□□□□□ -1.65
VRK1-203ENST00000555067 SIRPB2Q5JXA9 342 aa4.72□□□□□ -1.65
VRK1-203ENST00000555067 ELFN2Q5R3F8 820 aa4.72□□□□□ -1.65
VRK1-203ENST00000555067 IL23RQ5VWK5 629 aa4.72□□□□□ -1.65
VRK1-203ENST00000555067 SLC35E4Q6ICL7 350 aa4.72□□□□□ -1.65
VRK1-203ENST00000555067 FUT10Q6P4F1 479 aa4.72□□□□□ -1.65
VRK1-203ENST00000555067 IL17RELQ6ZVW7 336 aa4.72□□□□□ -1.65
VRK1-203ENST00000555067 ASB18Q6ZVZ8 466 aa4.72□□□□□ -1.65
VRK1-203ENST00000555067 OTUD6AQ7L8S5 288 aa4.72□□□□□ -1.65
VRK1-203ENST00000555067 BNIPLQ7Z465 357 aa4.72□□□□□ -1.65
VRK1-203ENST00000555067 MMD2Q8IY49 270 aa4.72□□□□□ -1.65
VRK1-203ENST00000555067 GCNT2Q8N0V5 402 aa4.72□□□□□ -1.65
VRK1-203ENST00000555067 TTC5Q8N0Z6 440 aa4.72□□□□□ -1.65
VRK1-203ENST00000555067 GBGT1Q8N5D6 347 aa4.72□□□□□ -1.65
VRK1-203ENST00000555067 GPRC5AQ8NFJ5 357 aa4.72□□□□□ -1.65
VRK1-203ENST00000555067 U2AF1L4Q8WU68 220 aaKnown RBP4.72□□□□□ -1.65
VRK1-203ENST00000555067 CHPT1Q8WUD6 406 aa4.72□□□□□ -1.65
VRK1-203ENST00000555067 FAM20AQ96MK3 541 aa4.72□□□□□ -1.65
VRK1-203ENST00000555067 GSDMAQ96QA5 445 aa4.72□□□□□ -1.65
VRK1-203ENST00000555067 LITAFQ99732 161 aa4.72□□□□□ -1.65
VRK1-203ENST00000555067 VN1R1Q9GZP7 353 aa4.72□□□□□ -1.65
VRK1-203ENST00000555067 THAP2Q9H0W7 228 aa4.72□□□□□ -1.65
VRK1-203ENST00000555067 ACTL8Q9H568 366 aa4.72□□□□□ -1.65
VRK1-203ENST00000555067 C10orf88Q9H8K7 445 aa4.72□□□□□ -1.65
VRK1-203ENST00000555067 FAM207AQ9NSI2 230 aaPredicted RBP4.72□□□□□ -1.65
VRK1-203ENST00000555067 MIS18AQ9NYP9 233 aa4.72□□□□□ -1.65
VRK1-203ENST00000555067 FAF1Q9UNN5 650 aaPredicted RBP4.72□□□□□ -1.65
VRK1-203ENST00000555067 NPC1L1Q9UHC9 1359 aa4.72□□□□□ -1.65
VRK1-203ENST00000555067 SF3B1O75533 1304 aaKnown RBP eCLIP4.72□□□□□ -1.65
VRK1-203ENST00000555067 PTPRCP08575 1304 aa4.72□□□□□ -1.65
VRK1-203ENST00000555067 MED19A0JLT2 244 aaPredicted RBP4.71□□□□□ -1.66
VRK1-203ENST00000555067 GSAPA4D1B5 854 aa4.71□□□□□ -1.66
VRK1-203ENST00000555067 NCF1BA6NI72 391 aaPredicted RBP4.71□□□□□ -1.66
VRK1-203ENST00000555067 ZNF716A6NP11 495 aa4.71□□□□□ -1.66
VRK1-203ENST00000555067 NCF1CA8MVU1 366 aaPredicted RBP4.71□□□□□ -1.66
VRK1-203ENST00000555067 H0YIV9 168 aa4.71□□□□□ -1.66
VRK1-203ENST00000555067 LGALS8O00214 317 aa4.71□□□□□ -1.66
VRK1-203ENST00000555067 EEF2KO00418 725 aaKnown RBP4.71□□□□□ -1.66
VRK1-203ENST00000555067 CACNG3O60359 315 aa4.71□□□□□ -1.66
VRK1-203ENST00000555067 SNNO75324 88 aaPredicted RBP4.71□□□□□ -1.66
VRK1-203ENST00000555067 CIB2O75838 187 aa4.71□□□□□ -1.66
VRK1-203ENST00000555067 PIGNO95427 931 aa4.71□□□□□ -1.66
VRK1-203ENST00000555067 SYNGR4O95473 234 aa4.71□□□□□ -1.66
VRK1-203ENST00000555067 SERPINA3P01011 423 aa4.71□□□□□ -1.66
VRK1-203ENST00000555067 YES1P07947 543 aa4.71□□□□□ -1.66
VRK1-203ENST00000555067 SFTPBP07988 381 aa4.71□□□□□ -1.66
VRK1-203ENST00000555067 ZNF735P0CB33 412 aa4.71□□□□□ -1.66
VRK1-203ENST00000555067 ALDH4A1P30038 563 aa4.71□□□□□ -1.66
VRK1-203ENST00000555067 MNDAP41218 407 aa4.71□□□□□ -1.66
VRK1-203ENST00000555067 NLRP11P59045 1033 aaKnown RBP4.71□□□□□ -1.66
VRK1-203ENST00000555067 MYBPC1Q00872 1141 aa4.71□□□□□ -1.66
VRK1-203ENST00000555067 GTF2H2Q13888 395 aa4.71□□□□□ -1.66
VRK1-203ENST00000555067 ZNF234Q14588 700 aa4.71□□□□□ -1.66
VRK1-203ENST00000555067 RCN1Q15293 331 aa4.71□□□□□ -1.66
VRK1-203ENST00000555067 TPD52L1Q16890 204 aaPredicted RBP4.71□□□□□ -1.66
VRK1-203ENST00000555067 AGKQ53H12 422 aa4.71□□□□□ -1.66
VRK1-203ENST00000555067 NKAIN2Q5VXU1 208 aa4.71□□□□□ -1.66
VRK1-203ENST00000555067 GTF2H2CQ6P1K8 395 aa4.71□□□□□ -1.66
VRK1-203ENST00000555067 METAP1DQ6UB28 335 aaPredicted RBP4.71□□□□□ -1.66
VRK1-203ENST00000555067 CEACAM20Q6UY09 585 aa4.71□□□□□ -1.66
VRK1-203ENST00000555067 ZNF704Q6ZNC4 412 aaPredicted RBP4.71□□□□□ -1.66
VRK1-203ENST00000555067 LGI2Q8N0V4 545 aa4.71□□□□□ -1.66
VRK1-203ENST00000555067 CPSF7Q8N684 471 aaKnown RBP4.71□□□□□ -1.66
VRK1-203ENST00000555067 CCDC107Q8WV48 283 aa4.71□□□□□ -1.66
VRK1-203ENST00000555067 IRGQQ8WZA9 623 aa4.71□□□□□ -1.66
VRK1-203ENST00000555067 NT5C3BQ969T7 300 aa4.71□□□□□ -1.66
VRK1-203ENST00000555067 MCHR2Q969V1 340 aa4.71□□□□□ -1.66
VRK1-203ENST00000555067 NCLNQ969V3 563 aa4.71□□□□□ -1.66
VRK1-203ENST00000555067 MRPL53Q96EL3 112 aaKnown RBP4.71□□□□□ -1.66
VRK1-203ENST00000555067 CCDC3Q9BQI4 270 aa4.71□□□□□ -1.66
VRK1-203ENST00000555067 CBWD1Q9BRT8 395 aa4.71□□□□□ -1.66
VRK1-203ENST00000555067 LRMDAQ9H2I8 198 aa4.71□□□□□ -1.66
VRK1-203ENST00000555067 METTL7AQ9H8H3 244 aa4.71□□□□□ -1.66
VRK1-203ENST00000555067 CALHM2Q9HA72 323 aa4.71□□□□□ -1.66
VRK1-203ENST00000555067 DDX28Q9NUL7 540 aaKnown RBP4.71□□□□□ -1.66
VRK1-203ENST00000555067 KLHL8Q9P2G9 620 aaPredicted RBP4.71□□□□□ -1.66
VRK1-203ENST00000555067 NARFQ9UHQ1 456 aa4.71□□□□□ -1.66
VRK1-203ENST00000555067 DAPK2Q9UIK4 370 aa4.71□□□□□ -1.66
VRK1-203ENST00000555067 PSME2Q9UL46 239 aa4.71□□□□□ -1.66
VRK1-203ENST00000555067 OR2W1Q9Y3N9 320 aa4.71□□□□□ -1.66
VRK1-203ENST00000555067 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.71□□□□□ -1.66
VRK1-203ENST00000555067 TEX13DA0A0J9YY54 714 aaPredicted RBP4.7□□□□□ -1.66
VRK1-203ENST00000555067 GOLGA8OA6NCC3 632 aa4.7□□□□□ -1.66
VRK1-203ENST00000555067 ASB14A6NK59 587 aa4.7□□□□□ -1.66
VRK1-203ENST00000555067 A8MUI8 341 aa4.7□□□□□ -1.66
VRK1-203ENST00000555067 GOLGA8NF8WBI6 632 aa4.7□□□□□ -1.66
VRK1-203ENST00000555067 L7N2F9 121 aa4.7□□□□□ -1.66
VRK1-203ENST00000555067 CCL24O00175 119 aa4.7□□□□□ -1.66
VRK1-203ENST00000555067 PDXKO00764 312 aa4.7□□□□□ -1.66
VRK1-203ENST00000555067 CHUKO15111 745 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms