RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 ASMTP46597 345 aa10.62□□□□□ -0.71
SRP54-205ENST00000554803 HTR6P50406 440 aa10.62□□□□□ -0.71
SRP54-205ENST00000554803 RPS3AP61247 264 aaKnown RBP10.62□□□□□ -0.71
SRP54-205ENST00000554803 OLR1P78380 273 aa10.62□□□□□ -0.71
SRP54-205ENST00000554803 CDC20Q12834 499 aa10.62□□□□□ -0.71
SRP54-205ENST00000554803 SRSF6Q13247 344 aaKnown RBP10.62□□□□□ -0.71
SRP54-205ENST00000554803 SELPLGQ14242 412 aa10.62□□□□□ -0.71
SRP54-205ENST00000554803 CTF1Q16619 201 aa10.62□□□□□ -0.71
SRP54-205ENST00000554803 ZIK1Q3SY52 487 aaPredicted RBP10.62□□□□□ -0.71
SRP54-205ENST00000554803 PYCR3Q53H96 274 aa10.62□□□□□ -0.71
SRP54-205ENST00000554803 SPANXN4Q5MJ08 99 aa10.62□□□□□ -0.71
SRP54-205ENST00000554803 PARS2Q7L3T8 475 aaKnown RBP10.62□□□□□ -0.71
SRP54-205ENST00000554803 IGFN1Q86VF2 1251 aa10.62□□□□□ -0.71
SRP54-205ENST00000554803 ZDHHC21Q8IVQ6 265 aa10.62□□□□□ -0.71
SRP54-205ENST00000554803 MSRB3Q8IXL7 192 aa10.62□□□□□ -0.71
SRP54-205ENST00000554803 GALNT6Q8NCL4 622 aa10.62□□□□□ -0.71
SRP54-205ENST00000554803 BPIFB6Q8NFQ5 453 aa10.62□□□□□ -0.71
SRP54-205ENST00000554803 OR8J2Q8NGG1 315 aa10.62□□□□□ -0.71
SRP54-205ENST00000554803 OR14C36Q8NHC7 312 aa10.62□□□□□ -0.71
SRP54-205ENST00000554803 FBXO30Q8TB52 745 aa10.62□□□□□ -0.71
SRP54-205ENST00000554803 TANKQ92844 425 aa10.62□□□□□ -0.71
SRP54-205ENST00000554803 YIPF6Q96EC8 236 aa10.62□□□□□ -0.71
SRP54-205ENST00000554803 RACGAP1Q9H0H5 632 aa10.62□□□□□ -0.71
SRP54-205ENST00000554803 WDR70Q9NW82 654 aa10.62□□□□□ -0.71
SRP54-205ENST00000554803 ZDHHC3Q9NYG2 299 aa10.62□□□□□ -0.71
SRP54-205ENST00000554803 TMEFF2Q9UIK5 374 aaPredicted RBP10.62□□□□□ -0.71
SRP54-205ENST00000554803 CRLS1Q9UJA2 301 aa10.62□□□□□ -0.71
SRP54-205ENST00000554803 NDRG4Q9ULP0 352 aaKnown RBP10.62□□□□□ -0.71
SRP54-205ENST00000554803 HIVEP3Q5T1R4 2406 aa10.62□□□□□ -0.71
SRP54-205ENST00000554803 F8P00451 2351 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 TBC1D3DA0A087WVF3 549 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 TBC1D3IA0A087WXS9 549 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 TBC1D3EA0A087X179 549 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 TBC1D3KA0A087X1G2 549 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 CCDC187A0A096LP49 1063 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 GLYATL1P3A0A0U1RQE8 302 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 TSPAN11A1L157 253 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 TBC1D3FA6NER0 549 aaPredicted RBP10.61□□□□□ -0.71
SRP54-205ENST00000554803 NPIPB15A6NHN6 443 aaPredicted RBP10.61□□□□□ -0.71
SRP54-205ENST00000554803 A8MX80 341 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 TBC1D3LB9A6J9 549 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 C1QTNF3-AMACRE9PGA6 284 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 KPNA3O00505 521 aaPredicted RBP10.61□□□□□ -0.71
SRP54-205ENST00000554803 TAPBPO15533 448 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 NUAK1O60285 661 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 OR1I1O60431 355 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 RNGTTO60942 597 aaKnown RBP10.61□□□□□ -0.71
SRP54-205ENST00000554803 SERPINA1P01009 418 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 SEMG1P04279 462 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 FABP3P05413 133 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 HIST1H2AGP0C0S8 130 aaPredicted RBP10.61□□□□□ -0.71
SRP54-205ENST00000554803 OR56A5P0C7T3 313 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 TBC1D3HP0C7X1 549 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 GPX2P18283 190 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 HIST1H2ADP20671 130 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 HTR1BP28222 390 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 RPL3P39023 403 aaKnown RBP10.61□□□□□ -0.71
SRP54-205ENST00000554803 KIR3DL1P43629 444 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 HSPA7P48741 367 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 DGKQP52824 942 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 ITGA1P56199 1179 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 ELP6Q0PNE2 266 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 CLCA4Q14CN2 919 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 ZNF805Q5CZA5 627 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 PLEKHS1Q5SXH7 462 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 ANXA8L1Q5VT79 327 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 AGAP7PQ5VUJ5 663 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 UBE2UQ5VVX9 321 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 LIPJQ5W064 366 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 TBC1D3GQ6DHY5 549 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 TBC1D3CQ6IPX1 549 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 ENPP6Q6UWR7 440 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 FAM92BQ6ZTR7 304 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 EIF3MQ7L2H7 374 aaKnown RBP10.61□□□□□ -0.71
SRP54-205ENST00000554803 CAMKMTQ7Z624 323 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 TSPAN33Q86UF1 283 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 SLC30A8Q8IWU4 369 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 KLHDC8AQ8IYD2 350 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 TBC1D3Q8IZP1 549 aaPredicted RBP10.61□□□□□ -0.71
SRP54-205ENST00000554803 NXPE1Q8N323 547 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 PAF1Q8N7H5 531 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 VPS37AQ8NEZ2 397 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 C9orf43Q8TAL5 461 aaPredicted RBP10.61□□□□□ -0.71
SRP54-205ENST00000554803 MCOLN3Q8TDD5 553 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 FAR1Q8WVX9 515 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 ATL1Q8WXF7 558 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 MYDGFQ969H8 173 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 FAM131CQ96AQ9 280 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 HIST1H2AHQ96KK5 128 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 PHF12Q96QT6 1004 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 HIST1H2AJQ99878 128 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 H2AFJQ9BTM1 129 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 SLC12A9Q9BXP2 914 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 GABARAPL3Q9BY60 117 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 MMP27Q9H306 513 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 EHD1Q9H4M9 534 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 ELOVL6Q9H5J4 265 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 ASB8Q9H765 288 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 REEP1Q9H902 201 aa10.61□□□□□ -0.71
SRP54-205ENST00000554803 SARS2Q9NP81 518 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms