RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 FNDC4Q9H6D8 234 aaPredicted RBP2.64□□□□□ -1.99
SCFD1-213ENST00000554776 MARCH7Q9H992 704 aa2.64□□□□□ -1.99
SCFD1-213ENST00000554776 PLEKHA3Q9HB20 300 aa2.64□□□□□ -1.99
SCFD1-213ENST00000554776 MED17Q9NVC6 651 aa2.64□□□□□ -1.99
SCFD1-213ENST00000554776 TECRQ9NZ01 308 aaKnown RBP2.64□□□□□ -1.99
SCFD1-213ENST00000554776 CLIP2Q9UDT6 1046 aa2.64□□□□□ -1.99
SCFD1-213ENST00000554776 HOOK1Q9UJC3 728 aaKnown RBP2.64□□□□□ -1.99
SCFD1-213ENST00000554776 TSPAN16Q9UKR8 245 aa2.64□□□□□ -1.99
SCFD1-213ENST00000554776 ATG4BQ9Y4P1 393 aa2.64□□□□□ -1.99
SCFD1-213ENST00000554776 TMEM89A2RUT3 159 aa2.63□□□□□ -1.99
SCFD1-213ENST00000554776 ARHGAP42A6NI28 874 aa2.63□□□□□ -1.99
SCFD1-213ENST00000554776 TCP10L2B9ZVM9 353 aa2.63□□□□□ -1.99
SCFD1-213ENST00000554776 EEF2KO00418 725 aaKnown RBP2.63□□□□□ -1.99
SCFD1-213ENST00000554776 ADAM12O43184 909 aa2.63□□□□□ -1.99
SCFD1-213ENST00000554776 LRP3O75074 770 aa2.63□□□□□ -1.99
SCFD1-213ENST00000554776 OR6B1O95007 311 aa2.63□□□□□ -1.99
SCFD1-213ENST00000554776 NXPH2O95156 264 aa2.63□□□□□ -1.99
SCFD1-213ENST00000554776 TXNDC12O95881 172 aa2.63□□□□□ -1.99
SCFD1-213ENST00000554776 PGK2P07205 417 aa2.63□□□□□ -1.99
SCFD1-213ENST00000554776 ZSCAN5DPP0CG00 497 aa2.63□□□□□ -1.99
SCFD1-213ENST00000554776 KRT5P13647 590 aa2.63□□□□□ -1.99
SCFD1-213ENST00000554776 ANPEPP15144 967 aa2.63□□□□□ -1.99
SCFD1-213ENST00000554776 ZNF18P17022 549 aa2.63□□□□□ -1.99
SCFD1-213ENST00000554776 AOC1P19801 751 aa2.63□□□□□ -1.99
SCFD1-213ENST00000554776 CYP3A5P20815 502 aa2.63□□□□□ -1.99
SCFD1-213ENST00000554776 PDHA2P29803 388 aa2.63□□□□□ -1.99
SCFD1-213ENST00000554776 MARCKSP29966 332 aaPredicted RBP2.63□□□□□ -1.99
SCFD1-213ENST00000554776 GPR183P32249 361 aa2.63□□□□□ -1.99
SCFD1-213ENST00000554776 TSFMP43897 325 aaKnown RBP2.63□□□□□ -1.99
SCFD1-213ENST00000554776 LIMK2P53671 638 aa2.63□□□□□ -1.99
SCFD1-213ENST00000554776 PEX3P56589 373 aa2.63□□□□□ -1.99
SCFD1-213ENST00000554776 IRX4P78413 519 aa2.63□□□□□ -1.99
SCFD1-213ENST00000554776 IRX1P78414 480 aaPredicted RBP2.63□□□□□ -1.99
SCFD1-213ENST00000554776 GABPAQ06546 454 aa2.63□□□□□ -1.99
SCFD1-213ENST00000554776 BTG3Q14201 252 aaPredicted RBP2.63□□□□□ -1.99
SCFD1-213ENST00000554776 SMC1AQ14683 1233 aaKnown RBP2.63□□□□□ -1.99
SCFD1-213ENST00000554776 TRADDQ15628 312 aa2.63□□□□□ -1.99
SCFD1-213ENST00000554776 CEBPEQ15744 281 aa2.63□□□□□ -1.99
SCFD1-213ENST00000554776 NEPROQ6NW34 567 aa2.63□□□□□ -1.99
SCFD1-213ENST00000554776 FIP1L1Q6UN15 594 aaKnown RBP2.63□□□□□ -1.99
SCFD1-213ENST00000554776 ZNF730Q6ZMV8 503 aa2.63□□□□□ -1.99
SCFD1-213ENST00000554776 TMEM26Q6ZUK4 368 aa2.63□□□□□ -1.99
SCFD1-213ENST00000554776 CYP4V2Q6ZWL3 525 aaPredicted RBP2.63□□□□□ -1.99
SCFD1-213ENST00000554776 TAF8Q7Z7C8 310 aa2.63□□□□□ -1.99
SCFD1-213ENST00000554776 MYPOPQ86VE0 399 aaPredicted RBP2.63□□□□□ -1.99
SCFD1-213ENST00000554776 CHURC1Q8WUH1 139 aa2.63□□□□□ -1.99
SCFD1-213ENST00000554776 LIPHQ8WWY8 451 aa2.63□□□□□ -1.99
SCFD1-213ENST00000554776 MRPL24Q96A35 216 aaKnown RBP2.63□□□□□ -1.99
SCFD1-213ENST00000554776 POM121L2Q96KW2 1035 aa2.63□□□□□ -1.99
SCFD1-213ENST00000554776 LURAP1Q96LR2 239 aa2.63□□□□□ -1.99
SCFD1-213ENST00000554776 SAMD8Q96LT4 415 aa2.63□□□□□ -1.99
SCFD1-213ENST00000554776 NSMCE2Q96MF7 247 aa2.63□□□□□ -1.99
SCFD1-213ENST00000554776 GPR137Q96N19 417 aa2.63□□□□□ -1.99
SCFD1-213ENST00000554776 ZNF599Q96NL3 588 aa2.63□□□□□ -1.99
SCFD1-213ENST00000554776 ZNF300Q96RE9 604 aaPredicted RBP2.63□□□□□ -1.99
SCFD1-213ENST00000554776 COQ7Q99807 217 aa2.63□□□□□ -1.99
SCFD1-213ENST00000554776 SYT15Q9BQS2 421 aa2.63□□□□□ -1.99
SCFD1-213ENST00000554776 HOXD1Q9GZZ0 328 aa2.63□□□□□ -1.99
SCFD1-213ENST00000554776 WWP1Q9H0M0 922 aa2.63□□□□□ -1.99
SCFD1-213ENST00000554776 SLC26A1Q9H2B4 701 aa2.63□□□□□ -1.99
SCFD1-213ENST00000554776 KCNK13Q9HB14 408 aa2.63□□□□□ -1.99
SCFD1-213ENST00000554776 S100A14Q9HCY8 104 aa2.63□□□□□ -1.99
SCFD1-213ENST00000554776 UBE2TQ9NPD8 197 aaPredicted RBP2.63□□□□□ -1.99
SCFD1-213ENST00000554776 IL1RAPQ9NPH3 570 aa2.63□□□□□ -1.99
SCFD1-213ENST00000554776 B3GAT2Q9NPZ5 323 aa2.63□□□□□ -1.99
SCFD1-213ENST00000554776 ZDHHC18Q9NUE0 388 aa2.63□□□□□ -1.99
SCFD1-213ENST00000554776 SOHLH2Q9NX45 425 aa2.63□□□□□ -1.99
SCFD1-213ENST00000554776 MIS18AQ9NYP9 233 aa2.63□□□□□ -1.99
SCFD1-213ENST00000554776 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.63□□□□□ -1.99
SCFD1-213ENST00000554776 TRIM10Q9UDY6 481 aa2.63□□□□□ -1.99
SCFD1-213ENST00000554776 KCNN3Q9UGI6 736 aa2.63□□□□□ -1.99
SCFD1-213ENST00000554776 NARFQ9UHQ1 456 aa2.63□□□□□ -1.99
SCFD1-213ENST00000554776 LNPEPQ9UIQ6 1025 aa2.63□□□□□ -1.99
SCFD1-213ENST00000554776 CCPG1Q9ULG6 757 aa2.63□□□□□ -1.99
SCFD1-213ENST00000554776 CLCA3PQ9Y6N3 262 aa2.63□□□□□ -1.99
SCFD1-213ENST00000554776 RGSL1A5PLK6 1076 aa2.62□□□□□ -1.99
SCFD1-213ENST00000554776 NKX6-3A6NJ46 265 aa2.62□□□□□ -1.99
SCFD1-213ENST00000554776 YJEFN3A6XGL0 299 aa2.62□□□□□ -1.99
SCFD1-213ENST00000554776 KRTAP16-1A8MUX0 517 aa2.62□□□□□ -1.99
SCFD1-213ENST00000554776 ARHGEF9O43307 516 aa2.62□□□□□ -1.99
SCFD1-213ENST00000554776 ZNF749O43361 778 aa2.62□□□□□ -1.99
SCFD1-213ENST00000554776 ANXA9O76027 345 aa2.62□□□□□ -1.99
SCFD1-213ENST00000554776 ANGPTL1O95841 491 aa2.62□□□□□ -1.99
SCFD1-213ENST00000554776 TBX6O95947 436 aaPredicted RBP2.62□□□□□ -1.99
SCFD1-213ENST00000554776 SFTPBP07988 381 aa2.62□□□□□ -1.99
SCFD1-213ENST00000554776 GNSP15586 552 aa2.62□□□□□ -1.99
SCFD1-213ENST00000554776 PTMSP20962 102 aa2.62□□□□□ -1.99
SCFD1-213ENST00000554776 GLRA1P23415 457 aa2.62□□□□□ -1.99
SCFD1-213ENST00000554776 ACP1P24666 158 aa2.62□□□□□ -1.99
SCFD1-213ENST00000554776 HLA-FP30511 346 aa2.62□□□□□ -1.99
SCFD1-213ENST00000554776 TNFRSF4P43489 277 aa2.62□□□□□ -1.99
SCFD1-213ENST00000554776 MTIF2P46199 727 aaKnown RBP2.62□□□□□ -1.99
SCFD1-213ENST00000554776 CCL11P51671 97 aa2.62□□□□□ -1.99
SCFD1-213ENST00000554776 CCR4P51679 360 aa2.62□□□□□ -1.99
SCFD1-213ENST00000554776 TKTL1P51854 596 aa2.62□□□□□ -1.99
SCFD1-213ENST00000554776 SLC26A5P58743 744 aa2.62□□□□□ -1.99
SCFD1-213ENST00000554776 RPS27AP62979 156 aaKnown RBP2.62□□□□□ -1.99
SCFD1-213ENST00000554776 TSTA3Q13630 321 aaPredicted RBP2.62□□□□□ -1.99
SCFD1-213ENST00000554776 TOR1AIP1Q5JTV8 583 aa2.62□□□□□ -1.99
SCFD1-213ENST00000554776 LIPKQ5VXJ0 399 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms