RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 RGS16O15492 202 aaPredicted RBP7.84□□□□□ -1.15
PSEN1-209ENST00000553855 SLC28A2O43868 658 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 GUCY1B2O75343 617 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 SH3BGRLO75368 114 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 CEACAM4O75871 244 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 SERPINA7P05543 415 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 RPS17P08708 135 aaKnown RBP7.84□□□□□ -1.15
PSEN1-209ENST00000553855 CPA3P15088 417 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 EPORP19235 508 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 CD22P20273 847 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 CPN2P22792 545 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 CERS1P27544 350 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 PPP2R1BP30154 601 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 BUD31P41223 144 aaPredicted RBP7.84□□□□□ -1.15
PSEN1-209ENST00000553855 ARFIP1P53367 373 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 PRKAA2P54646 552 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 CDH13P55290 713 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 PKNOX1P55347 436 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 SOX8P57073 446 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 RPS13P62277 151 aaKnown RBP7.84□□□□□ -1.15
PSEN1-209ENST00000553855 STX4Q12846 297 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 E2F2Q14209 437 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 BTBD16Q32M84 506 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 KRT71Q3SY84 523 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 SFT2D3Q587I9 215 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 ZNF678Q5SXM1 525 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 DEPDC1Q5TB30 811 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 FRG2Q64ET8 278 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 OR4C11Q6IEV9 310 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 JMJD6Q6NYC1 403 aaPredicted RBP7.84□□□□□ -1.15
PSEN1-209ENST00000553855 TMEM205Q6UW68 189 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 QSOX2Q6ZRP7 698 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 NUDT13Q86X67 352 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 WFDC8Q8IUA0 241 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 SRRM1Q8IYB3 904 aaKnown RBP7.84□□□□□ -1.15
PSEN1-209ENST00000553855 ZNF595Q8IYB9 648 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 CA13Q8N1Q1 262 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 ZNF843Q8N446 348 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 MREGQ8N565 214 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 MYRIPQ8NFW9 859 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 OR4F6Q8NGB9 312 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 OR2W6PQ8NHA6 318 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 SUN3Q8TAQ9 357 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 TRPC4APQ8TEL6 797 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 ZNF483Q8TF39 744 aaPredicted RBP7.84□□□□□ -1.15
PSEN1-209ENST00000553855 SELENOMQ8WWX9 145 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 MTFMTQ96DP5 389 aaKnown RBP7.84□□□□□ -1.15
PSEN1-209ENST00000553855 FRG2BQ96QU4 278 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 NUDT9Q9BW91 350 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 BRINP2Q9C0B6 783 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 SEMA4CQ9C0C4 833 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 ZNF700Q9H0M5 742 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 OR51B5Q9H339 312 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 CENPHQ9H3R5 247 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 LYRM4Q9HD34 91 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 DMRT3Q9NQL9 472 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 PRTFDC1Q9NRG1 225 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 LYARQ9NX58 379 aaKnown RBP7.84□□□□□ -1.15
PSEN1-209ENST00000553855 PSD3Q9NYI0 1048 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 REV1Q9UBZ9 1251 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 TRPS1Q9UHF7 1281 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 PHF11Q9UIL8 331 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 RAB21Q9UL25 225 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 RNF11Q9Y3C5 154 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 TSC22D4Q9Y3Q8 395 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 ZZEF1O43149 2961 aa7.83□□□□□ -1.16
PSEN1-209ENST00000553855 NAV2Q8IVL1 2488 aa7.83□□□□□ -1.16
PSEN1-209ENST00000553855 LOC102723996A0A087X1L8 192 aa7.83□□□□□ -1.16
PSEN1-209ENST00000553855 DYTNA2CJ06 578 aa7.83□□□□□ -1.16
PSEN1-209ENST00000553855 B2RBV5 119 aa7.83□□□□□ -1.16
PSEN1-209ENST00000553855 SAP18O00422 153 aaKnown RBP7.83□□□□□ -1.16
PSEN1-209ENST00000553855 OR7A17O14581 309 aa7.83□□□□□ -1.16
PSEN1-209ENST00000553855 DLX3O60479 287 aa7.83□□□□□ -1.16
PSEN1-209ENST00000553855 PRAMEF4O60810 478 aa7.83□□□□□ -1.16
PSEN1-209ENST00000553855 ULK1O75385 1050 aa7.83□□□□□ -1.16
PSEN1-209ENST00000553855 SEC24DO94855 1032 aaPredicted RBP7.83□□□□□ -1.16
PSEN1-209ENST00000553855 IFNA16P05015 189 aa7.83□□□□□ -1.16
PSEN1-209ENST00000553855 ENO1P06733 434 aaKnown RBP7.83□□□□□ -1.16
PSEN1-209ENST00000553855 SMIM10L1P0DMW3 83 aa7.83□□□□□ -1.16
PSEN1-209ENST00000553855 COX6A1P12074 109 aa7.83□□□□□ -1.16
PSEN1-209ENST00000553855 COX7A2P14406 83 aa7.83□□□□□ -1.16
PSEN1-209ENST00000553855 TNNI3P19429 210 aa7.83□□□□□ -1.16
PSEN1-209ENST00000553855 HIST1H1TP22492 207 aaPredicted RBP7.83□□□□□ -1.16
PSEN1-209ENST00000553855 ATP5A1P25705 553 aaKnown RBP7.83□□□□□ -1.16
PSEN1-209ENST00000553855 LIM2P55344 173 aa7.83□□□□□ -1.16
PSEN1-209ENST00000553855 HSD17B7P56937 341 aa7.83□□□□□ -1.16
PSEN1-209ENST00000553855 ARG2P78540 354 aa7.83□□□□□ -1.16
PSEN1-209ENST00000553855 LCP2Q13094 533 aa7.83□□□□□ -1.16
PSEN1-209ENST00000553855 SLAMF1Q13291 335 aa7.83□□□□□ -1.16
PSEN1-209ENST00000553855 BIKQ13323 160 aa7.83□□□□□ -1.16
PSEN1-209ENST00000553855 CUL3Q13618 768 aa7.83□□□□□ -1.16
PSEN1-209ENST00000553855 SERTAD2Q14140 314 aa7.83□□□□□ -1.16
PSEN1-209ENST00000553855 GGTA1PQ4G0N0 100 aa7.83□□□□□ -1.16
PSEN1-209ENST00000553855 SGO1Q5FBB7 561 aa7.83□□□□□ -1.16
PSEN1-209ENST00000553855 CRB2Q5IJ48 1285 aa7.83□□□□□ -1.16
PSEN1-209ENST00000553855 ABHD17BQ5VST6 288 aa7.83□□□□□ -1.16
PSEN1-209ENST00000553855 PRAMEF9Q5VWM5 478 aa7.83□□□□□ -1.16
PSEN1-209ENST00000553855 PAPD4Q6PIY7 484 aaKnown RBP7.83□□□□□ -1.16
PSEN1-209ENST00000553855 ISLR2Q6UXK2 745 aa7.83□□□□□ -1.16
PSEN1-209ENST00000553855 ZYG11AQ6WRX3 759 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms