RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 PCDHAC1Q9H158 963 aa16.62■□□□□ 0.25
PSEN1-206ENST00000553447 SLC35C2Q9NQQ7 365 aa16.62■□□□□ 0.25
PSEN1-206ENST00000553447 PRDM9Q9NQV7 894 aa16.62■□□□□ 0.25
PSEN1-206ENST00000553447 ACSS1Q9NUB1 689 aaPredicted RBP16.62■□□□□ 0.25
PSEN1-206ENST00000553447 TAS2R9Q9NYW1 312 aa16.62■□□□□ 0.25
PSEN1-206ENST00000553447 SPACA6W5XKT8 324 aa16.62■□□□□ 0.25
PSEN1-206ENST00000553447 IGHV5-10-1A0A0J9YXX1 117 aa16.61■□□□□ 0.25
PSEN1-206ENST00000553447 WASHC1A8K0Z3 465 aa16.61■□□□□ 0.25
PSEN1-206ENST00000553447 H3BMH7 237 aa16.61■□□□□ 0.25
PSEN1-206ENST00000553447 CLIC1O00299 241 aa16.61■□□□□ 0.25
PSEN1-206ENST00000553447 FOXS1O43638 330 aa16.61■□□□□ 0.25
PSEN1-206ENST00000553447 RDH16O75452 317 aa16.61■□□□□ 0.25
PSEN1-206ENST00000553447 OR2B3O76000 313 aa16.61■□□□□ 0.25
PSEN1-206ENST00000553447 FOLR1P15328 257 aa16.61■□□□□ 0.25
PSEN1-206ENST00000553447 TLX1P31314 330 aaPredicted RBP16.61■□□□□ 0.25
PSEN1-206ENST00000553447 TCF15Q12870 199 aa16.61■□□□□ 0.25
PSEN1-206ENST00000553447 BNIP2Q12982 314 aa16.61■□□□□ 0.25
PSEN1-206ENST00000553447 COL9A2Q14055 689 aaPredicted RBP16.61■□□□□ 0.25
PSEN1-206ENST00000553447 FLOT2Q14254 428 aa16.61■□□□□ 0.25
PSEN1-206ENST00000553447 MLC1Q15049 377 aa16.61■□□□□ 0.25
PSEN1-206ENST00000553447 OR52E8Q6IFG1 317 aa16.61■□□□□ 0.25
PSEN1-206ENST00000553447 ARHGAP22Q7Z5H3 698 aa16.61■□□□□ 0.25
PSEN1-206ENST00000553447 IFNEQ86WN2 208 aa16.61■□□□□ 0.25
PSEN1-206ENST00000553447 PRSS33Q8NF86 280 aa16.61■□□□□ 0.25
PSEN1-206ENST00000553447 OR5T3Q8NGG3 340 aa16.61■□□□□ 0.25
PSEN1-206ENST00000553447 RHBDD1Q8TEB9 315 aa16.61■□□□□ 0.25
PSEN1-206ENST00000553447 ZBED6CLQ96FA7 236 aaPredicted RBP16.61■□□□□ 0.25
PSEN1-206ENST00000553447 CSF3RQ99062 836 aa16.61■□□□□ 0.25
PSEN1-206ENST00000553447 KAT8Q9H7Z6 458 aaKnown RBP16.61■□□□□ 0.25
PSEN1-206ENST00000553447 BCAP29Q9UHQ4 241 aa16.61■□□□□ 0.25
PSEN1-206ENST00000553447 GMEB1Q9Y692 573 aa16.61■□□□□ 0.25
PSEN1-206ENST00000553447 A0A0A6YYC8 382 aaPredicted RBP16.6■□□□□ 0.25
PSEN1-206ENST00000553447 EVPLLA8MZ36 301 aa16.6■□□□□ 0.25
PSEN1-206ENST00000553447 MYO1GB0I1T2 1018 aa16.6■□□□□ 0.25
PSEN1-206ENST00000553447 I3L1I5 382 aaPredicted RBP16.6■□□□□ 0.25
PSEN1-206ENST00000553447 NTN3O00634 580 aaPredicted RBP16.6■□□□□ 0.25
PSEN1-206ENST00000553447 CDX4O14627 284 aaPredicted RBP16.6■□□□□ 0.25
PSEN1-206ENST00000553447 ERAL1O75616 437 aaKnown RBP16.6■□□□□ 0.25
PSEN1-206ENST00000553447 NSA2O95478 260 aaKnown RBP16.6■□□□□ 0.25
PSEN1-206ENST00000553447 ATP6V1G2O95670 118 aa16.6■□□□□ 0.25
PSEN1-206ENST00000553447 PPIBP23284 216 aaKnown RBP16.6■□□□□ 0.25
PSEN1-206ENST00000553447 ACP1P24666 158 aa16.6■□□□□ 0.25
PSEN1-206ENST00000553447 HTR1EP28566 365 aa16.6■□□□□ 0.25
PSEN1-206ENST00000553447 NTSP30990 170 aa16.6■□□□□ 0.25
PSEN1-206ENST00000553447 MANFP55145 182 aaKnown RBP16.6■□□□□ 0.25
PSEN1-206ENST00000553447 RAB38P57729 211 aa16.6■□□□□ 0.25
PSEN1-206ENST00000553447 SLC14A1Q13336 389 aa16.6■□□□□ 0.25
PSEN1-206ENST00000553447 GPR155Q7Z3F1 870 aa16.6■□□□□ 0.25
PSEN1-206ENST00000553447 CALHM3Q86XJ0 350 aa16.6■□□□□ 0.25
PSEN1-206ENST00000553447 TRIML2Q8N7C3 387 aa16.6■□□□□ 0.25
PSEN1-206ENST00000553447 OR10A6Q8NH74 314 aa16.6■□□□□ 0.25
PSEN1-206ENST00000553447 OR1L3Q8NH93 324 aa16.6■□□□□ 0.25
PSEN1-206ENST00000553447 ZFP28Q8NHY6 868 aa16.6■□□□□ 0.25
PSEN1-206ENST00000553447 ZFP90Q8TF47 636 aa16.6■□□□□ 0.25
PSEN1-206ENST00000553447 JADE3Q92613 823 aa16.6■□□□□ 0.25
PSEN1-206ENST00000553447 CCDC74BQ96LY2 380 aa16.6■□□□□ 0.25
PSEN1-206ENST00000553447 ZNF583Q96ND8 569 aa16.6■□□□□ 0.25
PSEN1-206ENST00000553447 BBS4Q96RK4 519 aa16.6■□□□□ 0.25
PSEN1-206ENST00000553447 GFM1Q96RP9 751 aaKnown RBP16.6■□□□□ 0.25
PSEN1-206ENST00000553447 PRRX2Q99811 253 aa16.6■□□□□ 0.25
PSEN1-206ENST00000553447 TRIM4Q9C037 500 aa16.6■□□□□ 0.25
PSEN1-206ENST00000553447 MUC13Q9H3R2 512 aa16.6■□□□□ 0.25
PSEN1-206ENST00000553447 RPF2Q9H7B2 306 aaKnown RBP16.6■□□□□ 0.25
PSEN1-206ENST00000553447 TPT1P8Q9HAU6 139 aa16.6■□□□□ 0.25
PSEN1-206ENST00000553447 GIMAP4Q9NUV9 329 aa16.6■□□□□ 0.25
PSEN1-206ENST00000553447 FTSJ1Q9UET6 329 aa16.6■□□□□ 0.25
PSEN1-206ENST00000553447 PSME2Q9UL46 239 aa16.6■□□□□ 0.25
PSEN1-206ENST00000553447 USP22Q9UPT9 525 aa16.6■□□□□ 0.25
PSEN1-206ENST00000553447 ENTPD4Q9Y227 616 aa16.6■□□□□ 0.25
PSEN1-206ENST00000553447 SPTBP11277 2137 aa16.6■□□□□ 0.25
PSEN1-206ENST00000553447 COL27A1Q8IZC6 1860 aaPredicted RBP16.59■□□□□ 0.25
PSEN1-206ENST00000553447 FAM220BPB1ANY3 271 aa16.59■□□□□ 0.25
PSEN1-206ENST00000553447 C1QCP02747 245 aa16.59■□□□□ 0.25
PSEN1-206ENST00000553447 GP1BAP07359 652 aa16.59■□□□□ 0.25
PSEN1-206ENST00000553447 CD59P13987 128 aa16.59■□□□□ 0.25
PSEN1-206ENST00000553447 GPX2P18283 190 aa16.59■□□□□ 0.25
PSEN1-206ENST00000553447 AVPR1BP47901 424 aa16.59■□□□□ 0.25
PSEN1-206ENST00000553447 GZMMP51124 257 aa16.59■□□□□ 0.25
PSEN1-206ENST00000553447 ITGA1P56199 1179 aa16.59■□□□□ 0.25
PSEN1-206ENST00000553447 OR4D2P58180 307 aa16.59■□□□□ 0.25
PSEN1-206ENST00000553447 SIM1P81133 766 aaPredicted RBP16.59■□□□□ 0.25
PSEN1-206ENST00000553447 SHC2P98077 582 aa16.59■□□□□ 0.25
PSEN1-206ENST00000553447 ABHD18Q0P651 414 aa16.59■□□□□ 0.25
PSEN1-206ENST00000553447 SPEM2Q0P670 501 aa16.59■□□□□ 0.25
PSEN1-206ENST00000553447 SPIDRQ14159 915 aa16.59■□□□□ 0.25
PSEN1-206ENST00000553447 CEBPEQ15744 281 aa16.59■□□□□ 0.25
PSEN1-206ENST00000553447 FXNQ16595 210 aa16.59■□□□□ 0.25
PSEN1-206ENST00000553447 FAM214AQ32MH5 1076 aa16.59■□□□□ 0.25
PSEN1-206ENST00000553447 ZNF551Q7Z340 670 aaPredicted RBP16.59■□□□□ 0.25
PSEN1-206ENST00000553447 PTRH1Q86Y79 214 aaKnown RBP16.59■□□□□ 0.25
PSEN1-206ENST00000553447 CLEC4FQ8N1N0 589 aa16.59■□□□□ 0.25
PSEN1-206ENST00000553447 DTWD1Q8N5C7 304 aa16.59■□□□□ 0.25
PSEN1-206ENST00000553447 HIPK4Q8NE63 616 aa16.59■□□□□ 0.25
PSEN1-206ENST00000553447 BHLHE22Q8NFJ8 381 aaPredicted RBP16.59■□□□□ 0.25
PSEN1-206ENST00000553447 STMN2Q93045 179 aa16.59■□□□□ 0.25
PSEN1-206ENST00000553447 ZNF501Q96CX3 271 aaPredicted RBP16.59■□□□□ 0.25
PSEN1-206ENST00000553447 FAM120BQ96EK7 910 aaKnown RBP16.59■□□□□ 0.25
PSEN1-206ENST00000553447 CNRIP1Q96F85 164 aaPredicted RBP16.59■□□□□ 0.25
PSEN1-206ENST00000553447 AMDHD1Q96NU7 426 aa16.59■□□□□ 0.25
PSEN1-206ENST00000553447 SLC35A5Q9BS91 424 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms