RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

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Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 E2F2Q14209 437 aa16.73■□□□□ 0.27
SYNE3-202ENST00000553340 MPP7Q5T2T1 576 aa16.73■□□□□ 0.27
SYNE3-202ENST00000553340 LIPKQ5VXJ0 399 aa16.73■□□□□ 0.27
SYNE3-202ENST00000553340 RNLSQ5VYX0 342 aa16.73■□□□□ 0.27
SYNE3-202ENST00000553340 CST9Q5W186 159 aa16.73■□□□□ 0.27
SYNE3-202ENST00000553340 DPY19L3Q6ZPD9 716 aa16.73■□□□□ 0.27
SYNE3-202ENST00000553340 OR8J1Q8NGP2 316 aa16.73■□□□□ 0.27
SYNE3-202ENST00000553340 TSSK6Q9BXA6 273 aa16.73■□□□□ 0.27
SYNE3-202ENST00000553340 MYNNQ9NPC7 610 aa16.73■□□□□ 0.27
SYNE3-202ENST00000553340 SAP18O00422 153 aaKnown RBP16.72■□□□□ 0.27
SYNE3-202ENST00000553340 TMCC2O75069 709 aa16.72■□□□□ 0.27
SYNE3-202ENST00000553340 POP4O95707 220 aaKnown RBP16.72■□□□□ 0.27
SYNE3-202ENST00000553340 LGI1O95970 557 aa16.72■□□□□ 0.27
SYNE3-202ENST00000553340 MYL9P24844 172 aa16.72■□□□□ 0.27
SYNE3-202ENST00000553340 XKP51811 444 aa16.72■□□□□ 0.27
SYNE3-202ENST00000553340 TAS2R50P59544 299 aa16.72■□□□□ 0.27
SYNE3-202ENST00000553340 TPGS2Q68CL5 300 aa16.72■□□□□ 0.27
SYNE3-202ENST00000553340 C12orf73Q69YU5 71 aa16.72■□□□□ 0.27
SYNE3-202ENST00000553340 ZNF438Q7Z4V0 828 aa16.72■□□□□ 0.27
SYNE3-202ENST00000553340 GPR65Q8IYL9 337 aa16.72■□□□□ 0.27
SYNE3-202ENST00000553340 RDH10Q8IZV5 341 aa16.72■□□□□ 0.27
SYNE3-202ENST00000553340 CLDN22Q8N7P3 220 aa16.72■□□□□ 0.27
SYNE3-202ENST00000553340 GDPD1Q8N9F7 314 aa16.72■□□□□ 0.27
SYNE3-202ENST00000553340 CREB3L4Q8TEY5 395 aa16.72■□□□□ 0.27
SYNE3-202ENST00000553340 TRIM63Q969Q1 353 aa16.72■□□□□ 0.27
SYNE3-202ENST00000553340 DIRAS2Q96HU8 199 aa16.72■□□□□ 0.27
SYNE3-202ENST00000553340 WDR70Q9NW82 654 aa16.72■□□□□ 0.27
SYNE3-202ENST00000553340 PCM1Q15154 2024 aa16.72■□□□□ 0.27
SYNE3-202ENST00000553340 FOXE1O00358 373 aaPredicted RBP16.72■□□□□ 0.27
SYNE3-202ENST00000553340 QSOX1O00391 747 aa16.72■□□□□ 0.27
SYNE3-202ENST00000553340 PRRG1O14668 218 aa16.72■□□□□ 0.27
SYNE3-202ENST00000553340 TSPAN6O43657 245 aa16.72■□□□□ 0.27
SYNE3-202ENST00000553340 OR10H3O60404 316 aa16.72■□□□□ 0.27
SYNE3-202ENST00000553340 CSF3P09919 207 aa16.72■□□□□ 0.27
SYNE3-202ENST00000553340 PRKCAP17252 672 aa16.72■□□□□ 0.27
SYNE3-202ENST00000553340 POLR2LP62875 67 aaKnown RBP16.72■□□□□ 0.27
SYNE3-202ENST00000553340 SNAP47Q5SQN1 464 aa16.72■□□□□ 0.27
SYNE3-202ENST00000553340 DCST1Q5T197 706 aa16.72■□□□□ 0.27
SYNE3-202ENST00000553340 MFSD4BQ5TF39 518 aa16.72■□□□□ 0.27
SYNE3-202ENST00000553340 FAM71E1Q6IPT2 247 aa16.72■□□□□ 0.27
SYNE3-202ENST00000553340 UNC5DQ6UXZ4 953 aa16.72■□□□□ 0.27
SYNE3-202ENST00000553340 BTN2A2Q8WVV5 523 aa16.72■□□□□ 0.27
SYNE3-202ENST00000553340 MSLNLQ96KJ4 702 aa16.72■□□□□ 0.27
SYNE3-202ENST00000553340 FOPNLQ96NB1 174 aa16.72■□□□□ 0.27
SYNE3-202ENST00000553340 FRMD6Q96NE9 622 aa16.72■□□□□ 0.27
SYNE3-202ENST00000553340 FYTTD1Q96QD9 318 aaKnown RBP16.72■□□□□ 0.27
SYNE3-202ENST00000553340 C11orf54Q9H0W9 315 aaPredicted RBP16.72■□□□□ 0.27
SYNE3-202ENST00000553340 TXNL4BQ9NX01 149 aaKnown RBP16.72■□□□□ 0.27
SYNE3-202ENST00000553340 HS3ST2Q9Y278 367 aa16.72■□□□□ 0.27
SYNE3-202ENST00000553340 A0A1W2PQL4 384 aaPredicted RBP16.71■□□□□ 0.27
SYNE3-202ENST00000553340 B4DXG7 233 aa16.71■□□□□ 0.27
SYNE3-202ENST00000553340 C5orf58C9J3I9 102 aa16.71■□□□□ 0.27
SYNE3-202ENST00000553340 OLFM2O95897 454 aa16.71■□□□□ 0.27
SYNE3-202ENST00000553340 TGFB1P01137 390 aa16.71■□□□□ 0.27
SYNE3-202ENST00000553340 IGFBP1P08833 259 aaPredicted RBP16.71■□□□□ 0.27
SYNE3-202ENST00000553340 SELPP16109 830 aa16.71■□□□□ 0.27
SYNE3-202ENST00000553340 GSTM5P46439 218 aa16.71■□□□□ 0.27
SYNE3-202ENST00000553340 PRKCZQ05513 592 aa16.71■□□□□ 0.27
SYNE3-202ENST00000553340 HNRNPA0Q13151 305 aaKnown RBP16.71■□□□□ 0.27
SYNE3-202ENST00000553340 HEPACAMQ14CZ8 416 aa16.71■□□□□ 0.27
SYNE3-202ENST00000553340 SLC35F1Q5T1Q4 408 aa16.71■□□□□ 0.27
SYNE3-202ENST00000553340 CCDC149Q6ZUS6 474 aa16.71■□□□□ 0.27
SYNE3-202ENST00000553340 USP30Q70CQ3 517 aa16.71■□□□□ 0.27
SYNE3-202ENST00000553340 CACTIN-AS1Q8N1I8 211 aa16.71■□□□□ 0.27
SYNE3-202ENST00000553340 TCEANCQ8N8B7 351 aa16.71■□□□□ 0.27
SYNE3-202ENST00000553340 IL17RCQ8NAC3 791 aa16.71■□□□□ 0.27
SYNE3-202ENST00000553340 WDR48Q8TAF3 677 aa16.71■□□□□ 0.27
SYNE3-202ENST00000553340 TIFAQ96CG3 184 aa16.71■□□□□ 0.27
SYNE3-202ENST00000553340 MTERF3Q96E29 417 aa16.71■□□□□ 0.27
SYNE3-202ENST00000553340 SLC6A18Q96N87 628 aa16.71■□□□□ 0.27
SYNE3-202ENST00000553340 VN1R3Q9BXE9 311 aa16.71■□□□□ 0.27
SYNE3-202ENST00000553340 NLNQ9BYT8 704 aa16.71■□□□□ 0.27
SYNE3-202ENST00000553340 MIXL1Q9H2W2 232 aa16.71■□□□□ 0.27
SYNE3-202ENST00000553340 OR51B5Q9H339 312 aa16.71■□□□□ 0.27
SYNE3-202ENST00000553340 CCDC88CQ9P219 2028 aa16.71■□□□□ 0.27
SYNE3-202ENST00000553340 TNFRSF10AO00220 468 aa16.71■□□□□ 0.27
SYNE3-202ENST00000553340 PLD2O14939 933 aa16.71■□□□□ 0.27
SYNE3-202ENST00000553340 NPC1O15118 1278 aa16.71■□□□□ 0.27
SYNE3-202ENST00000553340 ALPPP05187 535 aa16.71■□□□□ 0.27
SYNE3-202ENST00000553340 MLLT3P42568 568 aaPredicted RBP16.71■□□□□ 0.27
SYNE3-202ENST00000553340 ATN1P54259 1190 aaPredicted RBP16.71■□□□□ 0.27
SYNE3-202ENST00000553340 SLBPQ14493 270 aaKnown RBP eCLIP16.71■□□□□ 0.27
SYNE3-202ENST00000553340 SEC23BQ15437 767 aa16.71■□□□□ 0.27
SYNE3-202ENST00000553340 YIF1BQ5BJH7 314 aa16.71■□□□□ 0.27
SYNE3-202ENST00000553340 CPXM2Q8N436 756 aa16.71■□□□□ 0.27
SYNE3-202ENST00000553340 RIPOR3Q96MK2 946 aa16.71■□□□□ 0.27
SYNE3-202ENST00000553340 POLR2J3Q9H1A7 115 aaKnown RBP16.71■□□□□ 0.27
SYNE3-202ENST00000553340 RNF121Q9H920 327 aa16.71■□□□□ 0.27
SYNE3-202ENST00000553340 DMRT3Q9NQL9 472 aa16.71■□□□□ 0.27
SYNE3-202ENST00000553340 FAAHO00519 579 aa16.7■□□□□ 0.26
SYNE3-202ENST00000553340 SEC14L5O43304 696 aa16.7■□□□□ 0.26
SYNE3-202ENST00000553340 TSPAN19P0C672 248 aa16.7■□□□□ 0.26
SYNE3-202ENST00000553340 ZNF30P17039 623 aa16.7■□□□□ 0.26
SYNE3-202ENST00000553340 UQCRC2P22695 453 aa16.7■□□□□ 0.26
SYNE3-202ENST00000553340 ELAVL4P26378 380 aaKnown RBP16.7■□□□□ 0.26
SYNE3-202ENST00000553340 GNG2P59768 71 aa16.7■□□□□ 0.26
SYNE3-202ENST00000553340 TSTA3Q13630 321 aaPredicted RBP16.7■□□□□ 0.26
SYNE3-202ENST00000553340 OCLNQ16625 522 aa16.7■□□□□ 0.26
SYNE3-202ENST00000553340 IER5LQ5T953 404 aa16.7■□□□□ 0.26
SYNE3-202ENST00000553340 DDI2Q5TDH0 399 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms