RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 PIN1Q13526 163 aaPredicted RBP11.07□□□□□ -0.64
PPFIA2-227ENST00000552948 RSPO2Q6UXX9 243 aaPredicted RBP11.07□□□□□ -0.64
PPFIA2-227ENST00000552948 OXR1Q8N573 874 aa11.07□□□□□ -0.64
PPFIA2-227ENST00000552948 FBXO22Q8NEZ5 403 aa11.07□□□□□ -0.64
PPFIA2-227ENST00000552948 OR7G3Q8NG95 312 aa11.07□□□□□ -0.64
PPFIA2-227ENST00000552948 YIPF4Q9BSR8 244 aa11.07□□□□□ -0.64
PPFIA2-227ENST00000552948 CLEC4MQ9H2X3 399 aaPredicted RBP11.07□□□□□ -0.64
PPFIA2-227ENST00000552948 TXNL4BQ9NX01 149 aaKnown RBP11.07□□□□□ -0.64
PPFIA2-227ENST00000552948 C5AR2Q9P296 337 aa11.07□□□□□ -0.64
PPFIA2-227ENST00000552948 ZNF840PA6NDX5 716 aa11.07□□□□□ -0.64
PPFIA2-227ENST00000552948 ETHE1O95571 254 aa11.07□□□□□ -0.64
PPFIA2-227ENST00000552948 COL9A2Q14055 689 aaPredicted RBP11.07□□□□□ -0.64
PPFIA2-227ENST00000552948 CRTC1Q6UUV9 634 aa11.07□□□□□ -0.64
PPFIA2-227ENST00000552948 FAM109AQ8N4B1 249 aa11.07□□□□□ -0.64
PPFIA2-227ENST00000552948 OR8J2Q8NGG1 315 aa11.07□□□□□ -0.64
PPFIA2-227ENST00000552948 UFD1Q92890 307 aa11.07□□□□□ -0.64
PPFIA2-227ENST00000552948 LINC00597Q9H2U6 94 aa11.07□□□□□ -0.64
PPFIA2-227ENST00000552948 SERHL2Q9H4I8 314 aa11.07□□□□□ -0.64
PPFIA2-227ENST00000552948 REEP4Q9H6H4 257 aa11.07□□□□□ -0.64
PPFIA2-227ENST00000552948 ACER3Q9NUN7 267 aa11.07□□□□□ -0.64
PPFIA2-227ENST00000552948 ADAM12O43184 909 aa11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 SLC16A8O95907 504 aa11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 CBSLP0DN79 551 aa11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 IDSP22304 550 aa11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 CBLP22681 906 aa11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 TIA1P31483 386 aaKnown RBP eCLIP11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 CBSP35520 551 aa11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 RPS5P46782 204 aaKnown RBP11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 AP1S2P56377 157 aa11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 TXNDC8Q6A555 127 aa11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 TRAPPC5Q8IUR0 188 aa11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 OR52P1PQ8NH57 321 aa11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 WFDC5Q8TCV5 224 aa11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 CHAC2Q8WUX2 184 aa11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 TP53INP1Q96A56 240 aa11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 MSANTD3Q96H12 275 aa11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 MS4A4AQ96JQ5 239 aa11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 TEFMQ96QE5 360 aaKnown RBP11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 TBX5Q99593 518 aa11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 CNOT2Q9NZN8 540 aaKnown RBP11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 C2orf92A0A1B0GVN3 265 aa11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 SNTNA6NMZ2 147 aa11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 ZNF670-ZNF695F2Z2N8 137 aa11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 LYRM1O43325 122 aa11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 SGTAO43765 313 aa11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 F11P03951 625 aa11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 RHCEP18577 417 aa11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 LRRC32Q14392 662 aa11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 CCSMST1Q4G0I0 132 aa11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 SAXO2Q658L1 398 aa11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 ALG1LQ6GMV1 187 aa11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 MSANTD1Q6ZTZ1 278 aa11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 Q6ZVL8 140 aa11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 ABI3BPQ7Z7G0 1075 aa11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 GDPD1Q8N9F7 314 aa11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 OR8J1Q8NGP2 316 aa11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 ZNF431Q8TF32 576 aaPredicted RBP11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 ASB11Q8WXH4 323 aa11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 SORBS1Q9BX66 1292 aaKnown RBP11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 GON7Q9BXV9 100 aa11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 TMPRSS11EQ9UL52 423 aa11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 NDRG2Q9UN36 371 aaKnown RBP11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 MN1Q10571 1320 aaPredicted RBP11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 CENPFP49454 3210 aa11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 SEPT4O43236 478 aa11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 PRAMEF4O60810 478 aa11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 RPS7P62081 194 aaKnown RBP11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 ZNF763Q0D2J5 394 aa11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 ZNF79Q15937 498 aa11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 ZNF630Q2M218 657 aaPredicted RBP11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 FLYWCH1Q4VC44 716 aa11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 PRAMEF9Q5VWM5 478 aa11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 SIGIRRQ6IA17 410 aa11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 TPRG1Q6ZUI0 275 aa11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 OR52N2Q8NGI0 321 aa11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 C11orf24Q96F05 449 aaPredicted RBP11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 TRMT61AQ96FX7 289 aaKnown RBP11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 MAP6Q96JE9 813 aa11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 PTPN18Q99952 460 aa11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 B4GALT6Q9UBX8 382 aa11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 ADAM30Q9UKF2 790 aa11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 NYNRINQ9P2P1 1898 aaKnown RBP11.06□□□□□ -0.64
PPFIA2-227ENST00000552948 PARP14Q460N5 1801 aa11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 CD8B2A6NJW9 211 aa11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 ERVH48-1M5A8F1 160 aa11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 RTCAO00442 366 aaKnown RBP11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 SERPINI2O75830 405 aa11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 TOXO94900 526 aa11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 CD8BP10966 210 aa11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 OSMP13725 252 aa11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 ATF6P18850 670 aa11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 RPS25P62851 125 aaKnown RBP11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 ZNF385BQ569K4 471 aa11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 Q5BKY6 102 aa11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 LIPJQ5W064 366 aa11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 MZT2AQ6P582 158 aa11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 OLIG3Q7RTU3 272 aa11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 COMMD6Q7Z4G1 85 aa11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 RBM45Q8IUH3 476 aaKnown RBP11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 PHC2Q8IXK0 858 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms