RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 CBWD2Q8IUF1 395 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 CDKL3Q8IVW4 592 aaPredicted RBP3.91□□□□□ -1.78
USP44-208ENST00000552440 MICU2Q8IYU8 434 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 GTPBP8Q8N3Z3 284 aaPredicted RBP3.91□□□□□ -1.78
USP44-208ENST00000552440 C12orf76Q8N812 135 aaPredicted RBP3.91□□□□□ -1.78
USP44-208ENST00000552440 CPEB3Q8NE35 698 aaKnown RBP3.91□□□□□ -1.78
USP44-208ENST00000552440 ZNF461Q8TAF7 563 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 PIGCQ92535 297 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 LPAR1Q92633 364 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 RFT1Q96AA3 541 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 PINX1Q96BK5 328 aaKnown RBP3.91□□□□□ -1.78
USP44-208ENST00000552440 GPR137Q96N19 417 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 TSNARE1Q96NA8 513 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 ZNF317Q96PQ6 595 aaPredicted RBP3.91□□□□□ -1.78
USP44-208ENST00000552440 DUX5Q96PT3 197 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 ZNF347Q96SE7 839 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 CCT8L2Q96SF2 557 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 TSG101Q99816 390 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 HAUS8Q9BT25 410 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 ALG8Q9BVK2 526 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 TMEM39BQ9GZU3 492 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 ZMYND12Q9H0C1 365 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 DPAGT1Q9H3H5 408 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 RAB18Q9NP72 206 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.91□□□□□ -1.78
USP44-208ENST00000552440 TXNDC16Q9P2K2 825 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 GGA2Q9UJY4 613 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 SATB2Q9UPW6 733 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 ESYT2A0FGR8 921 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 WDR27A2RRH5 827 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 CCDC162PA2VCL2 907 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 SNTNA6NMZ2 147 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 PDZK1P1A8MUH7 402 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 NPIPA2E9PIF3 369 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 M0QZ24 198 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 WWP2O00308 870 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 OR10H2O60403 315 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 FTH1P02794 183 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 DGKAP23743 735 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 DCTDP32321 178 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 MAP2K2P36507 400 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 CRATP43155 626 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 SLC9A3P48764 834 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 RGS19P49795 217 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 TNFSF10P50591 281 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 ZNF84P51523 738 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 SOX10P56693 466 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 TNNC1P63316 161 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 LRRC63Q05C16 580 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 PJVKQ0ZLH3 352 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 KEAP1Q14145 624 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 STX1AQ16623 288 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 HSDL1Q3SXM5 330 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 ESCO2Q56NI9 601 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 SLC25A53Q5H9E4 307 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 PDZK1Q5T2W1 519 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 SUSD4Q5VX71 490 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 DENND2CQ68D51 928 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 SIGIRRQ6IA17 410 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 ZNF770Q6IQ21 691 aaPredicted RBP3.91□□□□□ -1.78
USP44-208ENST00000552440 RNASEKQ6P5S7 137 aaKnown RBP3.91□□□□□ -1.78
USP44-208ENST00000552440 CCDC137Q6PK04 289 aaKnown RBP3.91□□□□□ -1.78
USP44-208ENST00000552440 Q6YL49 198 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 FRA10AC1Q70Z53 315 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 BHLHA15Q7RTS1 189 aaPredicted RBP3.91□□□□□ -1.78
USP44-208ENST00000552440 AMIGO1Q86WK6 493 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 TMPRSS12Q86WS5 348 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 GPR65Q8IYL9 337 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 ST13P4Q8IZP2 240 aaPredicted RBP3.91□□□□□ -1.78
USP44-208ENST00000552440 LNX2Q8N448 690 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 PARP16Q8N5Y8 322 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 FAM86B1Q8N7N1 296 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 GPRC5AQ8NFJ5 357 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 RP9Q8TA86 221 aaKnown RBP3.91□□□□□ -1.78
USP44-208ENST00000552440 SUSD6Q92537 303 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 PHYHIPQ92561 330 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 PTCD3Q96EY7 689 aaKnown RBP3.91□□□□□ -1.78
USP44-208ENST00000552440 CHMP6Q96FZ7 201 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 SENP5Q96HI0 755 aaPredicted RBP3.91□□□□□ -1.78
USP44-208ENST00000552440 KAZALD1Q96I82 304 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 MARK4Q96L34 752 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 TECTBQ96PL2 329 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 SHCBP1LQ9BZQ2 653 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 MTIF3Q9H2K0 278 aaKnown RBP3.91□□□□□ -1.78
USP44-208ENST00000552440 ELOVL3Q9HB03 270 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 ACOXLQ9NUZ1 547 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 DLL3Q9NYJ7 618 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 EURLQ9NYK6 297 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 DKK2Q9UBU2 259 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 NDRG3Q9UGV2 375 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 ENPP5Q9UJA9 477 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 FZD4Q9ULV1 537 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 NME7Q9Y5B8 376 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 KLK4Q9Y5K2 254 aa3.91□□□□□ -1.78
USP44-208ENST00000552440 KDM6BO15054 1643 aa3.9□□□□□ -1.78
USP44-208ENST00000552440 GOLGA8QA0A0J9YX86 632 aa3.9□□□□□ -1.79
USP44-208ENST00000552440 TMEM120BA0PK00 339 aa3.9□□□□□ -1.79
USP44-208ENST00000552440 TRPC5OSA6NMA1 111 aa3.9□□□□□ -1.79
USP44-208ENST00000552440 EIF4E1BA6NMX2 242 aaKnown RBP3.9□□□□□ -1.79
USP44-208ENST00000552440 BCKDKO14874 412 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 149.8 ms