RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 CCNYL2Q5T2Q4 361 aa17.3■□□□□ 0.36
PRPF40B-216ENST00000552301 SLC6A19Q695T7 634 aa17.3■□□□□ 0.36
PRPF40B-216ENST00000552301 COMMD6Q7Z4G1 85 aa17.3■□□□□ 0.36
PRPF40B-216ENST00000552301 METTL4Q8N3J2 472 aa17.3■□□□□ 0.36
PRPF40B-216ENST00000552301 SLC5A8Q8N695 610 aa17.3■□□□□ 0.36
PRPF40B-216ENST00000552301 PSMF1Q92530 271 aa17.3■□□□□ 0.36
PRPF40B-216ENST00000552301 TANKQ92844 425 aa17.3■□□□□ 0.36
PRPF40B-216ENST00000552301 PNPLA2Q96AD5 504 aa17.3■□□□□ 0.36
PRPF40B-216ENST00000552301 KCNA7Q96RP8 456 aa17.3■□□□□ 0.36
PRPF40B-216ENST00000552301 TRMOQ9BU70 441 aa17.3■□□□□ 0.36
PRPF40B-216ENST00000552301 GATA5Q9BWX5 397 aaPredicted RBP17.3■□□□□ 0.36
PRPF40B-216ENST00000552301 ALOXE3Q9BYJ1 711 aa17.3■□□□□ 0.36
PRPF40B-216ENST00000552301 ABI3Q9P2A4 366 aa17.3■□□□□ 0.36
PRPF40B-216ENST00000552301 ATG4BQ9Y4P1 393 aa17.3■□□□□ 0.36
PRPF40B-216ENST00000552301 ZNF462Q96JM2 2506 aa17.3■□□□□ 0.36
PRPF40B-216ENST00000552301 TTLL8A6PVC2 850 aa17.29■□□□□ 0.36
PRPF40B-216ENST00000552301 COX7A2P14406 83 aa17.29■□□□□ 0.36
PRPF40B-216ENST00000552301 CREB1P16220 341 aa17.29■□□□□ 0.36
PRPF40B-216ENST00000552301 TNNI3P19429 210 aa17.29■□□□□ 0.36
PRPF40B-216ENST00000552301 ALDH3A1P30838 453 aa17.29■□□□□ 0.36
PRPF40B-216ENST00000552301 SOX11P35716 441 aa17.29■□□□□ 0.36
PRPF40B-216ENST00000552301 HTR6P50406 440 aa17.29■□□□□ 0.36
PRPF40B-216ENST00000552301 ID2Q02363 134 aa17.29■□□□□ 0.36
PRPF40B-216ENST00000552301 ELAVL1Q15717 326 aaKnown RBP17.29■□□□□ 0.36
PRPF40B-216ENST00000552301 IMPG1Q17R60 797 aa17.29■□□□□ 0.36
PRPF40B-216ENST00000552301 B3GNTL1Q67FW5 361 aaPredicted RBP17.29■□□□□ 0.36
PRPF40B-216ENST00000552301 C18orf63Q68DL7 685 aa17.29■□□□□ 0.36
PRPF40B-216ENST00000552301 MRM1Q6IN84 353 aaKnown RBP17.29■□□□□ 0.36
PRPF40B-216ENST00000552301 TMEM132CQ8N3T6 1108 aa17.29■□□□□ 0.36
PRPF40B-216ENST00000552301 DAZLQ92904 295 aaKnown RBP17.29■□□□□ 0.36
PRPF40B-216ENST00000552301 ZBTB9Q96C00 473 aa17.29■□□□□ 0.36
PRPF40B-216ENST00000552301 ZNF354BQ96LW1 612 aa17.29■□□□□ 0.36
PRPF40B-216ENST00000552301 SHCBP1LQ9BZQ2 653 aa17.29■□□□□ 0.36
PRPF40B-216ENST00000552301 EPN3Q9H201 632 aa17.29■□□□□ 0.36
PRPF40B-216ENST00000552301 ZBTB20Q9HC78 741 aaPredicted RBP17.29■□□□□ 0.36
PRPF40B-216ENST00000552301 LUZP4Q9P127 313 aa17.29■□□□□ 0.36
PRPF40B-216ENST00000552301 B3GNT3Q9Y2A9 372 aa17.29■□□□□ 0.36
PRPF40B-216ENST00000552301 CLCA3PQ9Y6N3 262 aa17.29■□□□□ 0.36
PRPF40B-216ENST00000552301 TGFBR3LH3BV60 316 aa17.28■□□□□ 0.36
PRPF40B-216ENST00000552301 UBFD1O14562 309 aaKnown RBP17.28■□□□□ 0.36
PRPF40B-216ENST00000552301 PROM1O43490 865 aa17.28■□□□□ 0.36
PRPF40B-216ENST00000552301 DYRK3O43781 588 aa17.28■□□□□ 0.36
PRPF40B-216ENST00000552301 TYROBPO43914 113 aa17.28■□□□□ 0.36
PRPF40B-216ENST00000552301 KALRNO60229 2985 aa17.28■□□□□ 0.36
PRPF40B-216ENST00000552301 AIFM1O95831 613 aa17.28■□□□□ 0.36
PRPF40B-216ENST00000552301 PLA2G2AP14555 144 aa17.28■□□□□ 0.36
PRPF40B-216ENST00000552301 CD97P48960 835 aa17.28■□□□□ 0.36
PRPF40B-216ENST00000552301 PLIN5Q00G26 463 aa17.28■□□□□ 0.36
PRPF40B-216ENST00000552301 TLE1Q04724 770 aa17.28■□□□□ 0.36
PRPF40B-216ENST00000552301 ACSM2AQ08AH3 577 aa17.28■□□□□ 0.36
PRPF40B-216ENST00000552301 BEND6Q5SZJ8 279 aaPredicted RBP17.28■□□□□ 0.36
PRPF40B-216ENST00000552301 FAM219BQ5XKK7 198 aa17.28■□□□□ 0.36
PRPF40B-216ENST00000552301 ACSM2BQ68CK6 577 aa17.28■□□□□ 0.36
PRPF40B-216ENST00000552301 OR52E8Q6IFG1 317 aa17.28■□□□□ 0.36
PRPF40B-216ENST00000552301 IGFL2Q6UWQ7 119 aa17.28■□□□□ 0.36
PRPF40B-216ENST00000552301 C1orf52Q8N6N3 182 aaKnown RBP17.28■□□□□ 0.36
PRPF40B-216ENST00000552301 B3GNT7Q8NFL0 401 aa17.28■□□□□ 0.36
PRPF40B-216ENST00000552301 OR14A16Q8NHC5 309 aa17.28■□□□□ 0.36
PRPF40B-216ENST00000552301 PPP1R14CQ8TAE6 165 aa17.28■□□□□ 0.36
PRPF40B-216ENST00000552301 DNAJB14Q8TBM8 379 aa17.28■□□□□ 0.36
PRPF40B-216ENST00000552301 PGM2Q96G03 612 aa17.28■□□□□ 0.36
PRPF40B-216ENST00000552301 DGAT2Q96PD7 388 aa17.28■□□□□ 0.36
PRPF40B-216ENST00000552301 MECRQ9BV79 373 aa17.28■□□□□ 0.36
PRPF40B-216ENST00000552301 ACPTQ9BZG2 426 aa17.28■□□□□ 0.36
PRPF40B-216ENST00000552301 EML4Q9HC35 981 aaKnown RBP17.28■□□□□ 0.36
PRPF40B-216ENST00000552301 SSU72Q9NP77 194 aaKnown RBP17.28■□□□□ 0.36
PRPF40B-216ENST00000552301 ASB4Q9Y574 426 aa17.28■□□□□ 0.36
PRPF40B-216ENST00000552301 MYOCOSA0A1B0GUC4 107 aa17.27■□□□□ 0.36
PRPF40B-216ENST00000552301 A0A1W2PR48 441 aa17.27■□□□□ 0.36
PRPF40B-216ENST00000552301 FGF17O60258 216 aa17.27■□□□□ 0.36
PRPF40B-216ENST00000552301 NPHS1O60500 1241 aa17.27■□□□□ 0.36
PRPF40B-216ENST00000552301 PRKRAO75569 313 aaKnown RBP17.27■□□□□ 0.36
PRPF40B-216ENST00000552301 CHEK2O96017 543 aa17.27■□□□□ 0.36
PRPF40B-216ENST00000552301 TPP2P29144 1249 aaPredicted RBP17.27■□□□□ 0.36
PRPF40B-216ENST00000552301 CLCN2P51788 898 aa17.27■□□□□ 0.36
PRPF40B-216ENST00000552301 FOXA1P55317 472 aa17.27■□□□□ 0.36
PRPF40B-216ENST00000552301 FOLH1Q04609 750 aa17.27■□□□□ 0.36
PRPF40B-216ENST00000552301 BIKQ13323 160 aa17.27■□□□□ 0.36
PRPF40B-216ENST00000552301 TLR1Q15399 786 aa17.27■□□□□ 0.36
PRPF40B-216ENST00000552301 MEP1AQ16819 746 aa17.27■□□□□ 0.36
PRPF40B-216ENST00000552301 SPIN4Q56A73 249 aa17.27■□□□□ 0.36
PRPF40B-216ENST00000552301 FCRLBQ6BAA4 426 aa17.27■□□□□ 0.36
PRPF40B-216ENST00000552301 SCIMPQ6UWF3 145 aa17.27■□□□□ 0.36
PRPF40B-216ENST00000552301 CUZD1Q86UP6 607 aa17.27■□□□□ 0.36
PRPF40B-216ENST00000552301 EXOC3L1Q86VI1 746 aa17.27■□□□□ 0.36
PRPF40B-216ENST00000552301 HOMEZQ8IX15 550 aa17.27■□□□□ 0.36
PRPF40B-216ENST00000552301 OR4N5Q8IXE1 308 aa17.27■□□□□ 0.36
PRPF40B-216ENST00000552301 AMER2Q8N7J2 671 aa17.27■□□□□ 0.36
PRPF40B-216ENST00000552301 VMP1Q96GC9 406 aa17.27■□□□□ 0.36
PRPF40B-216ENST00000552301 PELOQ9BRX2 385 aaKnown RBP17.27■□□□□ 0.36
PRPF40B-216ENST00000552301 FAIM2Q9BWQ8 316 aa17.27■□□□□ 0.36
PRPF40B-216ENST00000552301 DEFB126Q9BYW3 111 aa17.27■□□□□ 0.36
PRPF40B-216ENST00000552301 TRIM4Q9C037 500 aa17.27■□□□□ 0.36
PRPF40B-216ENST00000552301 KCNK9Q9NPC2 374 aa17.27■□□□□ 0.36
PRPF40B-216ENST00000552301 STMN3Q9NZ72 180 aa17.27■□□□□ 0.36
PRPF40B-216ENST00000552301 MAP10Q9P2G4 905 aa17.27■□□□□ 0.36
PRPF40B-216ENST00000552301 VTI1BQ9UEU0 232 aa17.27■□□□□ 0.36
PRPF40B-216ENST00000552301 FIS1Q9Y3D6 152 aa17.27■□□□□ 0.36
PRPF40B-216ENST00000552301 CLDN16Q9Y5I7 305 aa17.27■□□□□ 0.36
PRPF40B-216ENST00000552301 ACTL7BQ9Y614 415 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms