RNA–Protein interactions for RNA: ENST00000552085.1

SNRPF-204, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 3 BASIC

Gene SNRPF, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-204ENST00000552085 GBX1Q14549 363 aa11.33□□□□□ -0.6
SNRPF-204ENST00000552085 ZNF791Q3KP31 576 aaPredicted RBP11.33□□□□□ -0.6
SNRPF-204ENST00000552085 C22orf34Q6ZV56 151 aa11.33□□□□□ -0.6
SNRPF-204ENST00000552085 MPP5Q8N3R9 675 aa11.33□□□□□ -0.6
SNRPF-204ENST00000552085 FAM71DQ8N9W8 422 aa11.33□□□□□ -0.6
SNRPF-204ENST00000552085 OR52K1Q8NGK4 314 aa11.33□□□□□ -0.6
SNRPF-204ENST00000552085 AKAP1Q92667 903 aaKnown RBP eCLIP11.33□□□□□ -0.6
SNRPF-204ENST00000552085 ZNF778Q96MU6 729 aa11.33□□□□□ -0.6
SNRPF-204ENST00000552085 CLK4Q9HAZ1 481 aaKnown RBP11.33□□□□□ -0.6
SNRPF-204ENST00000552085 ADAP2Q9NPF8 381 aa11.33□□□□□ -0.6
SNRPF-204ENST00000552085 CATSPERZQ9NTU4 200 aa11.33□□□□□ -0.6
SNRPF-204ENST00000552085 C16orf97H3BN30 126 aa11.32□□□□□ -0.6
SNRPF-204ENST00000552085 CD3EAPO15446 510 aaKnown RBP11.32□□□□□ -0.6
SNRPF-204ENST00000552085 KLF4O43474 513 aa11.32□□□□□ -0.6
SNRPF-204ENST00000552085 SMNDC1O75940 238 aaKnown RBP eCLIP11.32□□□□□ -0.6
SNRPF-204ENST00000552085 ACSL3O95573 720 aa11.32□□□□□ -0.6
SNRPF-204ENST00000552085 CATP04040 527 aaKnown RBP11.32□□□□□ -0.6
SNRPF-204ENST00000552085 POU2F1P14859 743 aa11.32□□□□□ -0.6
SNRPF-204ENST00000552085 HNF1AP20823 631 aa11.32□□□□□ -0.6
SNRPF-204ENST00000552085 RNF4P78317 190 aa11.32□□□□□ -0.6
SNRPF-204ENST00000552085 PHKG1Q16816 387 aa11.32□□□□□ -0.6
SNRPF-204ENST00000552085 SCUBE1Q8IWY4 988 aa11.32□□□□□ -0.6
SNRPF-204ENST00000552085 LRRC56Q8IYG6 542 aaPredicted RBP11.32□□□□□ -0.6
SNRPF-204ENST00000552085 TMEM132CQ8N3T6 1108 aa11.32□□□□□ -0.6
SNRPF-204ENST00000552085 MFSD9Q8NBP5 474 aa11.32□□□□□ -0.6
SNRPF-204ENST00000552085 OR5L2Q8NGL0 311 aa11.32□□□□□ -0.6
SNRPF-204ENST00000552085 OR8K3Q8NH51 312 aa11.32□□□□□ -0.6
SNRPF-204ENST00000552085 WNT2BQ93097 391 aa11.32□□□□□ -0.6
SNRPF-204ENST00000552085 CAVIN3Q969G5 261 aa11.32□□□□□ -0.6
SNRPF-204ENST00000552085 ABTB1Q969K4 478 aaPredicted RBP11.32□□□□□ -0.6
SNRPF-204ENST00000552085 CALR3Q96L12 384 aaKnown RBP11.32□□□□□ -0.6
SNRPF-204ENST00000552085 HS6ST2Q96MM7 605 aa11.32□□□□□ -0.6
SNRPF-204ENST00000552085 TUBA1CQ9BQE3 449 aa11.32□□□□□ -0.6
SNRPF-204ENST00000552085 TMEM204Q9BSN7 226 aa11.32□□□□□ -0.6
SNRPF-204ENST00000552085 BARX1Q9HBU1 254 aaPredicted RBP11.32□□□□□ -0.6
SNRPF-204ENST00000552085 HOMER3Q9NSC5 361 aa11.32□□□□□ -0.6
SNRPF-204ENST00000552085 ELOVL5Q9NYP7 299 aa11.32□□□□□ -0.6
SNRPF-204ENST00000552085 LIPT1Q9Y234 373 aa11.32□□□□□ -0.6
SNRPF-204ENST00000552085 TCAF1Q9Y4C2 921 aa11.32□□□□□ -0.6
SNRPF-204ENST00000552085 A0A1W2PNV4 684 aa11.31□□□□□ -0.6
SNRPF-204ENST00000552085 FAM234BA2RU67 622 aa11.31□□□□□ -0.6
SNRPF-204ENST00000552085 GOLGA6L19H0YKK7 550 aa11.31□□□□□ -0.6
SNRPF-204ENST00000552085 TGFBR3LH3BV60 316 aa11.31□□□□□ -0.6
SNRPF-204ENST00000552085 NDUFS4O43181 175 aa11.31□□□□□ -0.6
SNRPF-204ENST00000552085 OR10H2O60403 315 aa11.31□□□□□ -0.6
SNRPF-204ENST00000552085 NDUFS7O75251 213 aa11.31□□□□□ -0.6
SNRPF-204ENST00000552085 HPNP05981 417 aa11.31□□□□□ -0.6
SNRPF-204ENST00000552085 SOD3P08294 240 aa11.31□□□□□ -0.6
SNRPF-204ENST00000552085 TPM1P09493 284 aa11.31□□□□□ -0.6
SNRPF-204ENST00000552085 ZNF888P0CJ79 500 aaPredicted RBP11.31□□□□□ -0.6
SNRPF-204ENST00000552085 IGHV4-31P0DP07 118 aa11.31□□□□□ -0.6
SNRPF-204ENST00000552085 GRK3P35626 688 aa11.31□□□□□ -0.6
SNRPF-204ENST00000552085 MAGEA1P43355 309 aa11.31□□□□□ -0.6
SNRPF-204ENST00000552085 COMPP49747 757 aaPredicted RBP11.31□□□□□ -0.6
SNRPF-204ENST00000552085 CDK9P50750 372 aaKnown RBP11.31□□□□□ -0.6
SNRPF-204ENST00000552085 RWDD2BP57060 319 aa11.31□□□□□ -0.6
SNRPF-204ENST00000552085 PWP1Q13610 501 aa11.31□□□□□ -0.6
SNRPF-204ENST00000552085 RPS6KA1Q15418 735 aa11.31□□□□□ -0.6
SNRPF-204ENST00000552085 ZNF474Q6S9Z5 364 aaPredicted RBP11.31□□□□□ -0.6
SNRPF-204ENST00000552085 GABPB2Q8TAK5 448 aaPredicted RBP11.31□□□□□ -0.6
SNRPF-204ENST00000552085 ZNF597Q96LX8 424 aa11.31□□□□□ -0.6
SNRPF-204ENST00000552085 SLC39A3Q9BRY0 314 aa11.31□□□□□ -0.6
SNRPF-204ENST00000552085 DOHHQ9BU89 302 aa11.31□□□□□ -0.6
SNRPF-204ENST00000552085 CHODLQ9H9P2 273 aa11.31□□□□□ -0.6
SNRPF-204ENST00000552085 CNIH4Q9P003 139 aa11.31□□□□□ -0.6
SNRPF-204ENST00000552085 MARCH4Q9P2E8 410 aaPredicted RBP11.31□□□□□ -0.6
SNRPF-204ENST00000552085 KCNS2Q9ULS6 477 aa11.31□□□□□ -0.6
SNRPF-204ENST00000552085 CLDN16Q9Y5I7 305 aa11.31□□□□□ -0.6
SNRPF-204ENST00000552085 CLCA3PQ9Y6N3 262 aa11.31□□□□□ -0.6
SNRPF-204ENST00000552085 GRID2IPA4D2P6 1211 aa11.3□□□□□ -0.6
SNRPF-204ENST00000552085 GOLGA6L9A6NEM1 432 aa11.3□□□□□ -0.6
SNRPF-204ENST00000552085 FRG2CA6NGY1 282 aa11.3□□□□□ -0.6
SNRPF-204ENST00000552085 H3BMM5 538 aa11.3□□□□□ -0.6
SNRPF-204ENST00000552085 GFYI3L273 518 aa11.3□□□□□ -0.6
SNRPF-204ENST00000552085 MFAP3LO75121 409 aa11.3□□□□□ -0.6
SNRPF-204ENST00000552085 NDUFS3O75489 264 aa11.3□□□□□ -0.6
SNRPF-204ENST00000552085 CREB1P16220 341 aa11.3□□□□□ -0.6
SNRPF-204ENST00000552085 GDF10P55107 478 aa11.3□□□□□ -0.6
SNRPF-204ENST00000552085 ELAVL1Q15717 326 aaKnown RBP11.3□□□□□ -0.6
SNRPF-204ENST00000552085 MPEG1Q2M385 716 aa11.3□□□□□ -0.6
SNRPF-204ENST00000552085 BBS9Q3SYG4 887 aa11.3□□□□□ -0.6
SNRPF-204ENST00000552085 MIDNQ504T8 468 aa11.3□□□□□ -0.6
SNRPF-204ENST00000552085 PIGGQ5H8A4 983 aa11.3□□□□□ -0.6
SNRPF-204ENST00000552085 ADGRE4PQ86SQ3 457 aa11.3□□□□□ -0.6
SNRPF-204ENST00000552085 CA13Q8N1Q1 262 aa11.3□□□□□ -0.6
SNRPF-204ENST00000552085 ZNF321PQ8N8H1 164 aa11.3□□□□□ -0.6
SNRPF-204ENST00000552085 TC2NQ8N9U0 490 aa11.3□□□□□ -0.6
SNRPF-204ENST00000552085 MORN4Q8NDC4 146 aa11.3□□□□□ -0.6
SNRPF-204ENST00000552085 OR10H5Q8NGA6 315 aa11.3□□□□□ -0.6
SNRPF-204ENST00000552085 STARD4Q96DR4 205 aa11.3□□□□□ -0.6
SNRPF-204ENST00000552085 BIRC8Q96P09 236 aa11.3□□□□□ -0.6
SNRPF-204ENST00000552085 UCN2Q96RP3 112 aa11.3□□□□□ -0.6
SNRPF-204ENST00000552085 PHACTR1Q9C0D0 580 aa11.3□□□□□ -0.6
SNRPF-204ENST00000552085 PRTFDC1Q9NRG1 225 aa11.3□□□□□ -0.6
SNRPF-204ENST00000552085 ARMCX1Q9P291 453 aa11.3□□□□□ -0.6
SNRPF-204ENST00000552085 GDF2Q9UK05 429 aaPredicted RBP11.3□□□□□ -0.6
SNRPF-204ENST00000552085 SH2B3Q9UQQ2 575 aa11.3□□□□□ -0.6
SNRPF-204ENST00000552085 ZNF148Q9UQR1 794 aa11.3□□□□□ -0.6
SNRPF-204ENST00000552085 SLC35F4A4IF30 521 aa11.29□□□□□ -0.6
SNRPF-204ENST00000552085 SSX4O60224 188 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms