RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 ZNF223Q9UK11 482 aaPredicted RBP4.95□□□□□ -1.62
HOXB3-213ENST00000552000 RIMKLBQ9ULI2 386 aa4.95□□□□□ -1.62
HOXB3-213ENST00000552000 SH2B3Q9UQQ2 575 aa4.95□□□□□ -1.62
HOXB3-213ENST00000552000 EIF3LQ9Y262 564 aaKnown RBP4.95□□□□□ -1.62
HOXB3-213ENST00000552000 SLC22A7Q9Y694 548 aa4.95□□□□□ -1.62
HOXB3-213ENST00000552000 WNK2Q9Y3S1 2297 aa4.95□□□□□ -1.62
HOXB3-213ENST00000552000 RAI1Q7Z5J4 1906 aaPredicted RBP4.95□□□□□ -1.62
HOXB3-213ENST00000552000 NBEAL2Q6ZNJ1 2754 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 IGKV3D-11A0A0A0MRZ8 115 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 SH3D21A4FU49 640 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 SMTNL1A8MU46 457 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 PSMD12O00232 456 aaPredicted RBP4.94□□□□□ -1.62
HOXB3-213ENST00000552000 WWP2O00308 870 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 CLDN4O14493 209 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 CASKO14936 926 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 PHF1O43189 567 aaPredicted RBP4.94□□□□□ -1.62
HOXB3-213ENST00000552000 PSMD3O43242 534 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 GALR3O60755 368 aaPredicted RBP4.94□□□□□ -1.62
HOXB3-213ENST00000552000 PSIP1O75475 530 aaKnown RBP4.94□□□□□ -1.62
HOXB3-213ENST00000552000 ZFAND5O76080 213 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 EPPINO95925 133 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 GAS8O95995 478 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 CATP04040 527 aaKnown RBP4.94□□□□□ -1.62
HOXB3-213ENST00000552000 SERPIND1P05546 499 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 SLC35G6P0C7Q6 338 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 ZNF888P0CJ79 500 aaPredicted RBP4.94□□□□□ -1.62
HOXB3-213ENST00000552000 CCL3P10147 92 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 ALOX12P18054 663 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 RPS3P23396 243 aaKnown RBP eCLIP4.94□□□□□ -1.625e-7■□□□□ 8.4
HOXB3-213ENST00000552000 ADRA1DP25100 572 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 ATP5DP30049 168 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 PPP2R1BP30154 601 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 FMO4P31512 558 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 HSD17B2P37059 387 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 GRIA1P42261 906 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 TRPC1P48995 793 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 TTPAP49638 278 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 NR1H2P55055 460 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 ACVR1Q04771 509 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 CDH17Q12864 832 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 CDK5R2Q13319 367 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 TRIM14Q14142 442 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 GBX1Q14549 363 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 SIX1Q15475 284 aaPredicted RBP4.94□□□□□ -1.62
HOXB3-213ENST00000552000 KLHL38Q2WGJ6 581 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 ACSF3Q4G176 576 aaPredicted RBP4.94□□□□□ -1.62
HOXB3-213ENST00000552000 HECTD2Q5U5R9 776 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 KIAA0930Q6ICG6 404 aaPredicted RBP4.94□□□□□ -1.62
HOXB3-213ENST00000552000 CAPN13Q6MZZ7 669 aaPredicted RBP4.94□□□□□ -1.62
HOXB3-213ENST00000552000 RTL4Q6ZR62 310 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 LINC00523Q86TU6 105 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 LRRC6Q86X45 466 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 GPALPP1Q8IXQ4 340 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 FBXW8Q8N3Y1 598 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 AFAP1L2Q8N4X5 818 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 MAPK1IP1LQ8NDC0 245 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 ZNF740Q8NDX6 193 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 PPP1R14CQ8TAE6 165 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 SMPDL3BQ92485 455 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 TM4SF19Q96DZ7 209 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 PDLIM2Q96JY6 352 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 SCYL1Q96KG9 808 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 DACH2Q96NX9 599 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 PANX2Q96RD6 677 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 RASL10BQ96S79 203 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 CCL19Q99731 98 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 AARSD1Q9BTE6 412 aaKnown RBP4.94□□□□□ -1.62
HOXB3-213ENST00000552000 OSBPL8Q9BZF1 889 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 NAT10Q9H0A0 1025 aaKnown RBP4.94□□□□□ -1.62
HOXB3-213ENST00000552000 SLC6A15Q9H2J7 730 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 UBTD1Q9HAC8 227 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 SACM1LQ9NTJ5 587 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 LMBRD1Q9NUN5 540 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 SPTLC3Q9NUV7 552 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 GALPQ9UBC7 116 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 ZNF629Q9UEG4 869 aaPredicted RBP4.94□□□□□ -1.62
HOXB3-213ENST00000552000 TCAF1Q9Y4C2 921 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 NPFFR2Q9Y5X5 522 aa4.94□□□□□ -1.62
HOXB3-213ENST00000552000 HEATR1Q9H583 2144 aaKnown RBP4.94□□□□□ -1.62
HOXB3-213ENST00000552000 C15orf38-AP3S2A0A0A6YYH1 394 aa4.93□□□□□ -1.62
HOXB3-213ENST00000552000 EIF1AYO14602 144 aaKnown RBP4.93□□□□□ -1.62
HOXB3-213ENST00000552000 NDUFS4O43181 175 aa4.93□□□□□ -1.62
HOXB3-213ENST00000552000 KLF4O43474 513 aa4.93□□□□□ -1.62
HOXB3-213ENST00000552000 CEP104O60308 925 aa4.93□□□□□ -1.62
HOXB3-213ENST00000552000 ZNF354AO60765 605 aaPredicted RBP4.93□□□□□ -1.62
HOXB3-213ENST00000552000 P04436 131 aa4.93□□□□□ -1.62
HOXB3-213ENST00000552000 RFPL3SP0C7P2 107 aa4.93□□□□□ -1.62
HOXB3-213ENST00000552000 CDH1P12830 882 aa4.93□□□□□ -1.62
HOXB3-213ENST00000552000 RNH1P13489 461 aaKnown RBP4.93□□□□□ -1.62
HOXB3-213ENST00000552000 CHRM3P20309 590 aa4.93□□□□□ -1.62
HOXB3-213ENST00000552000 FPR1P21462 350 aa4.93□□□□□ -1.62
HOXB3-213ENST00000552000 HRH2P25021 359 aa4.93□□□□□ -1.62
HOXB3-213ENST00000552000 IMPA1P29218 277 aa4.93□□□□□ -1.62
HOXB3-213ENST00000552000 TIMP3P35625 211 aa4.93□□□□□ -1.62
HOXB3-213ENST00000552000 PIGAP37287 484 aa4.93□□□□□ -1.62
HOXB3-213ENST00000552000 HNF4AP41235 474 aa4.93□□□□□ -1.62
HOXB3-213ENST00000552000 CPA2P48052 419 aa4.93□□□□□ -1.62
HOXB3-213ENST00000552000 PTH2RP49190 550 aa4.93□□□□□ -1.62
HOXB3-213ENST00000552000 GPR143P51810 404 aa4.93□□□□□ -1.62
HOXB3-213ENST00000552000 HK2P52789 917 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms