RNA–Protein interactions for RNA: ENST00000551634.5

NPAS3-211, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5

Gene NPAS3, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-211ENST00000551634 TIMP2P16035 220 aa22.51■■□□□ 1.19
NPAS3-211ENST00000551634 ATN1P54259 1190 aaPredicted RBP22.51■■□□□ 1.19
NPAS3-211ENST00000551634 LIM2P55344 173 aa22.51■■□□□ 1.19
NPAS3-211ENST00000551634 RUNX1T1Q06455 604 aa22.51■■□□□ 1.19
NPAS3-211ENST00000551634 TMC8Q8IU68 726 aa22.51■■□□□ 1.19
NPAS3-211ENST00000551634 SLC34A3Q8N130 599 aa22.51■■□□□ 1.19
NPAS3-211ENST00000551634 UBE2E3Q969T4 207 aa22.51■■□□□ 1.19
NPAS3-211ENST00000551634 TP53INP1Q96A56 240 aa22.51■■□□□ 1.19
NPAS3-211ENST00000551634 SCLYQ96I15 445 aa22.51■■□□□ 1.19
NPAS3-211ENST00000551634 SLC6A16Q9GZN6 736 aa22.51■■□□□ 1.19
NPAS3-211ENST00000551634 EPHX3Q9H6B9 360 aa22.51■■□□□ 1.19
NPAS3-211ENST00000551634 C11orf16Q9NQ32 467 aa22.51■■□□□ 1.19
NPAS3-211ENST00000551634 HELZP42694 1942 aaKnown RBP22.51■■□□□ 1.19
NPAS3-211ENST00000551634 IQCMA0A1B0GVH7 501 aa22.51■■□□□ 1.19
NPAS3-211ENST00000551634 CACNB4O00305 520 aaPredicted RBP22.51■■□□□ 1.19
NPAS3-211ENST00000551634 KLK1P06870 262 aa22.51■■□□□ 1.19
NPAS3-211ENST00000551634 PRSS53Q2L4Q9 553 aa22.51■■□□□ 1.19
NPAS3-211ENST00000551634 ATAD3CQ5T2N8 411 aa22.51■■□□□ 1.19
NPAS3-211ENST00000551634 ARMC4Q5T2S8 1044 aa22.51■■□□□ 1.19
NPAS3-211ENST00000551634 ZNF517Q6ZMY9 492 aaPredicted RBP22.51■■□□□ 1.19
NPAS3-211ENST00000551634 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.51■■□□□ 1.19
NPAS3-211ENST00000551634 RAB43Q86YS6 212 aa22.51■■□□□ 1.19
NPAS3-211ENST00000551634 OR8J1Q8NGP2 316 aa22.51■■□□□ 1.19
NPAS3-211ENST00000551634 DHRS1Q96LJ7 313 aa22.51■■□□□ 1.19
NPAS3-211ENST00000551634 TMEM121BQ9BXQ6 578 aaPredicted RBP22.51■■□□□ 1.19
NPAS3-211ENST00000551634 A4GALTQ9NPC4 353 aa22.51■■□□□ 1.19
NPAS3-211ENST00000551634 NDUFB11Q9NX14 153 aa22.51■■□□□ 1.19
NPAS3-211ENST00000551634 SCN5AQ14524 2016 aa22.5■■□□□ 1.19
NPAS3-211ENST00000551634 SAP18O00422 153 aaKnown RBP22.5■■□□□ 1.19
NPAS3-211ENST00000551634 NANOGP1Q8N7R0 232 aa22.5■■□□□ 1.19
NPAS3-211ENST00000551634 OR9Q1Q8NGQ5 310 aa22.5■■□□□ 1.19
NPAS3-211ENST00000551634 MIEF1Q9NQG6 463 aa22.5■■□□□ 1.19
NPAS3-211ENST00000551634 SH2B3Q9UQQ2 575 aa22.5■■□□□ 1.19
NPAS3-211ENST00000551634 HYKKA2RU49 373 aa22.5■■□□□ 1.19
NPAS3-211ENST00000551634 C5orf58C9J3I9 102 aa22.5■■□□□ 1.19
NPAS3-211ENST00000551634 FAAHO00519 579 aa22.5■■□□□ 1.19
NPAS3-211ENST00000551634 LEFTY1O75610 366 aa22.5■■□□□ 1.19
NPAS3-211ENST00000551634 IL3P08700 152 aa22.5■■□□□ 1.19
NPAS3-211ENST00000551634 TRAPPC2P0DI81 140 aa22.5■■□□□ 1.19
NPAS3-211ENST00000551634 TRAPPC2BP0DI82 140 aa22.5■■□□□ 1.19
NPAS3-211ENST00000551634 PSPHP78330 225 aa22.5■■□□□ 1.19
NPAS3-211ENST00000551634 MLLT11Q13015 90 aaPredicted RBP22.5■■□□□ 1.19
NPAS3-211ENST00000551634 ZNF658BQ4V348 819 aaPredicted RBP22.5■■□□□ 1.19
NPAS3-211ENST00000551634 DCST1Q5T197 706 aa22.5■■□□□ 1.19
NPAS3-211ENST00000551634 ERAP2Q6P179 960 aa22.5■■□□□ 1.19
NPAS3-211ENST00000551634 NXPE4Q6UWF7 544 aa22.5■■□□□ 1.19
NPAS3-211ENST00000551634 CASP12Q6UXS9 341 aa22.5■■□□□ 1.19
NPAS3-211ENST00000551634 DPPA4Q7L190 304 aa22.5■■□□□ 1.19
NPAS3-211ENST00000551634 SLC5A11Q8WWX8 675 aa22.5■■□□□ 1.19
NPAS3-211ENST00000551634 AUTS2Q8WXX7 1259 aa22.5■■□□□ 1.19
NPAS3-211ENST00000551634 PPP1R16AQ96I34 528 aa22.5■■□□□ 1.19
NPAS3-211ENST00000551634 TEFMQ96QE5 360 aaKnown RBP22.5■■□□□ 1.19
NPAS3-211ENST00000551634 MUTYHQ9UIF7 546 aa22.5■■□□□ 1.19
NPAS3-211ENST00000551634 DDOSTP39656 456 aa22.49■■□□□ 1.19
NPAS3-211ENST00000551634 SOX3P41225 446 aa22.49■■□□□ 1.19
NPAS3-211ENST00000551634 OCLNQ16625 522 aa22.49■■□□□ 1.19
NPAS3-211ENST00000551634 CEACAM20Q6UY09 585 aa22.49■■□□□ 1.19
NPAS3-211ENST00000551634 GPR151Q8TDV0 419 aa22.49■■□□□ 1.19
NPAS3-211ENST00000551634 NEURL3Q96EH8 262 aa22.49■■□□□ 1.19
NPAS3-211ENST00000551634 CXorf36Q9H7Y0 433 aa22.49■■□□□ 1.19
NPAS3-211ENST00000551634 TAAR2Q9P1P5 351 aa22.49■■□□□ 1.19
NPAS3-211ENST00000551634 CLEC2DQ9UHP7 191 aa22.49■■□□□ 1.19
NPAS3-211ENST00000551634 SSR3Q9UNL2 185 aa22.49■■□□□ 1.19
NPAS3-211ENST00000551634 RB1P06400 928 aa22.49■■□□□ 1.19
NPAS3-211ENST00000551634 CKMT1AP12532 417 aa22.49■■□□□ 1.19
NPAS3-211ENST00000551634 ELAVL4P26378 380 aaKnown RBP22.49■■□□□ 1.19
NPAS3-211ENST00000551634 C1DQ13901 141 aaKnown RBP22.49■■□□□ 1.19
NPAS3-211ENST00000551634 LEXMQ3ZCV2 418 aa22.49■■□□□ 1.19
NPAS3-211ENST00000551634 MFSD4BQ5TF39 518 aa22.49■■□□□ 1.19
NPAS3-211ENST00000551634 TMEM25Q86YD3 366 aa22.49■■□□□ 1.19
NPAS3-211ENST00000551634 NATD1Q8N6N6 113 aa22.49■■□□□ 1.19
NPAS3-211ENST00000551634 ZNF557Q8N988 423 aaPredicted RBP22.49■■□□□ 1.19
NPAS3-211ENST00000551634 OR9A1PQ8NGU1 263 aa22.49■■□□□ 1.19
NPAS3-211ENST00000551634 SRRQ9GZT4 340 aa22.49■■□□□ 1.19
NPAS3-211ENST00000551634 PDE9AO76083 593 aa22.48■■□□□ 1.19
NPAS3-211ENST00000551634 HOXD10P28358 340 aa22.48■■□□□ 1.19
NPAS3-211ENST00000551634 RPS5P46782 204 aaKnown RBP22.48■■□□□ 1.19
NPAS3-211ENST00000551634 RFX2P48378 723 aa22.48■■□□□ 1.19
NPAS3-211ENST00000551634 DGKGP49619 791 aa22.48■■□□□ 1.19
NPAS3-211ENST00000551634 IER5LQ5T953 404 aa22.48■■□□□ 1.19
NPAS3-211ENST00000551634 NXNL2Q5VZ03 156 aa22.48■■□□□ 1.19
NPAS3-211ENST00000551634 SAXO2Q658L1 398 aa22.48■■□□□ 1.19
NPAS3-211ENST00000551634 FAM181AQ8N9Y4 354 aa22.48■■□□□ 1.19
NPAS3-211ENST00000551634 VANGL1Q8TAA9 524 aaPredicted RBP22.48■■□□□ 1.19
NPAS3-211ENST00000551634 POLR2J2Q9GZM3 115 aaKnown RBP22.48■■□□□ 1.19
NPAS3-211ENST00000551634 DNAJC27Q9NZQ0 273 aa22.48■■□□□ 1.19
NPAS3-211ENST00000551634 FAM227AF5H4B4 570 aa22.48■■□□□ 1.19
NPAS3-211ENST00000551634 SEMA3DO95025 777 aa22.48■■□□□ 1.19
NPAS3-211ENST00000551634 MFN2O95140 757 aa22.48■■□□□ 1.19
NPAS3-211ENST00000551634 PBLDP30039 288 aaPredicted RBP22.48■■□□□ 1.19
NPAS3-211ENST00000551634 XKP51811 444 aa22.48■■□□□ 1.19
NPAS3-211ENST00000551634 SMIM11AP58511 58 aa22.48■■□□□ 1.19
NPAS3-211ENST00000551634 ZNF91Q05481 1191 aa22.48■■□□□ 1.19
NPAS3-211ENST00000551634 ZNF79Q15937 498 aa22.48■■□□□ 1.19
NPAS3-211ENST00000551634 AP2M1Q96CW1 435 aa22.48■■□□□ 1.19
NPAS3-211ENST00000551634 SNTG1Q9NSN8 517 aa22.48■■□□□ 1.19
NPAS3-211ENST00000551634 CMAHPQ9Y471 501 aa22.48■■□□□ 1.19
NPAS3-211ENST00000551634 TEX28O15482 410 aa22.47■■□□□ 1.19
NPAS3-211ENST00000551634 LGI1O95970 557 aa22.47■■□□□ 1.19
NPAS3-211ENST00000551634 DDX5P17844 614 aaKnown RBP22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms