RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 PRR30Q53SZ7 412 aaPredicted RBP2.26□□□□□ -2.05
CPSF6-207ENST00000551516 ESCO2Q56NI9 601 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 LRRC73Q5JTD7 316 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 MANEAQ5SRI9 462 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 C10orf25Q5T742 122 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 SPECC1LQ69YQ0 1117 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 GPR139Q6DWJ6 353 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 PNCKQ6P2M8 343 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 TMEM71Q6P5X7 295 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 IYDQ6PHW0 289 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 WDR74Q6RFH5 385 aaPredicted RBP2.26□□□□□ -2.05
CPSF6-207ENST00000551516 IGFL2Q6UWQ7 119 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 GDPD4Q6W3E5 623 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 SLC16A12Q6ZSM3 486 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 C11orf57Q6ZUT1 292 aaPredicted RBP2.26□□□□□ -2.05
CPSF6-207ENST00000551516 DPPA4Q7L190 304 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 HSD11B1LQ7Z5J1 315 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 PATL1Q86TB9 770 aaKnown RBP2.26□□□□□ -2.05
CPSF6-207ENST00000551516 NOXA1Q86UR1 476 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 GPSM1Q86YR5 675 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 ZNF547Q8IVP9 402 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 CHERPQ8IWX8 916 aaKnown RBP2.26□□□□□ -2.05
CPSF6-207ENST00000551516 SIX6OS1Q8N1H7 587 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 FBXO39Q8N4B4 442 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 PARP16Q8N5Y8 322 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 ZBTB2Q8N680 514 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 TEX26Q8N6G2 289 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 CCDC185Q8N715 623 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 RBMXL3Q8N7X1 1067 aaKnown RBP2.26□□□□□ -2.05
CPSF6-207ENST00000551516 ATP6V0D2Q8N8Y2 350 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 TEX45Q8NA69 505 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 POC5Q8NA72 575 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 SCCPDHQ8NBX0 429 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 OR6K2Q8NGY2 324 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 HUS1BQ8NHY5 278 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 MPLKIPQ8TAP9 179 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 ARRDC2Q8TBH0 407 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 TMEM163Q8TC26 289 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 GPT2Q8TD30 523 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 LMX1AQ8TE12 382 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 RNF139Q8WU17 664 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 DDB2Q92466 427 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 SNAPC3Q92966 411 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 NTAN1Q96AB6 310 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 TMEM18Q96B42 140 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 HMCESQ96FZ2 354 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 DHTKD1Q96HY7 919 aaPredicted RBP2.26□□□□□ -2.05
CPSF6-207ENST00000551516 SLC41A2Q96JW4 573 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 CFAP57Q96MR6 1250 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 RPRD1AQ96P16 312 aaPredicted RBP2.26□□□□□ -2.05
CPSF6-207ENST00000551516 SORCS2Q96PQ0 1159 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 LYSMD1Q96S90 227 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 WDR77Q9BQA1 342 aaPredicted RBP2.26□□□□□ -2.05
CPSF6-207ENST00000551516 CENPOQ9BU64 300 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 CALN1Q9BXU9 219 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 TM6SF2Q9BZW4 377 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 MAP6D1Q9H9H5 199 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 PLSCR4Q9NRQ2 329 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 EXOC1Q9NV70 894 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 TRNAU1APQ9NX07 287 aaKnown RBP2.26□□□□□ -2.05
CPSF6-207ENST00000551516 DDIT4Q9NX09 232 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 TUBA8Q9NY65 449 aaPredicted RBP2.26□□□□□ -2.05
CPSF6-207ENST00000551516 MSRB1Q9NZV6 116 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 MRPL15Q9P015 296 aaKnown RBP2.26□□□□□ -2.05
CPSF6-207ENST00000551516 TAAR2Q9P1P5 351 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 PTGFRNQ9P2B2 879 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 FBXL17Q9UF56 701 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 PISDQ9UG56 409 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 OR12D3Q9UGF7 316 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 SLC23A2Q9UGH3 650 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 ARMCX3Q9UH62 379 aaPredicted RBP2.26□□□□□ -2.05
CPSF6-207ENST00000551516 NENFQ9UMX5 172 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 ERVK-11Q9UQG0 969 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 TP53TG5Q9Y2B4 290 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 NTNG1Q9Y2I2 539 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 FRMD4BQ9Y2L6 1034 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 OR1A2Q9Y585 309 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 HS3ST3B1Q9Y662 390 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 MRPS18BQ9Y676 258 aaKnown RBP2.26□□□□□ -2.05
CPSF6-207ENST00000551516 CEPT1Q9Y6K0 416 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 RPS6KL1Q9Y6S9 549 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 LRP4O75096 1905 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 TCHHQ07283 1943 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 JMJD1CQ15652 2540 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 PKDREJQ9NTG1 2253 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 A0A0G2JK05 382 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 FAM90A8PA6NJQ4 464 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 TMEM110-MUSTN1A8MSY1 372 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 TMX2-CTNND1H3BSU7 103 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 IFNL4K9M1U5 179 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 KPNA3O00505 521 aaPredicted RBP2.25□□□□□ -2.05
CPSF6-207ENST00000551516 CTDSP2O14595 271 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 FPGTO14772 594 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 HCRTR1O43613 425 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 HCRTR2O43614 444 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 AKAP8O43823 692 aaKnown RBP2.25□□□□□ -2.05
CPSF6-207ENST00000551516 KLK8O60259 260 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 RAD1O60671 282 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 PPFIA2O75334 1257 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 KLF7O75840 302 aaPredicted RBP2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms