RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 LDB3O75112 727 aa21.12■□□□□ 0.97
BRF1-216ENST00000550208 HSPA4LO95757 839 aa21.12■□□□□ 0.97
BRF1-216ENST00000550208 TLX1P31314 330 aaPredicted RBP21.12■□□□□ 0.97
BRF1-216ENST00000550208 RAE1P78406 368 aaKnown RBP21.12■□□□□ 0.97
BRF1-216ENST00000550208 ID2Q02363 134 aa21.12■□□□□ 0.97
BRF1-216ENST00000550208 STX3Q13277 289 aa21.12■□□□□ 0.97
BRF1-216ENST00000550208 IMPG1Q17R60 797 aa21.12■□□□□ 0.97
BRF1-216ENST00000550208 SPDYAQ5MJ70 313 aa21.12■□□□□ 0.97
BRF1-216ENST00000550208 PAPD4Q6PIY7 484 aaKnown RBP21.12■□□□□ 0.97
BRF1-216ENST00000550208 KBTBD2Q8IY47 623 aa21.12■□□□□ 0.97
BRF1-216ENST00000550208 GOLGA6L1Q8N7Z2 621 aa21.12■□□□□ 0.97
BRF1-216ENST00000550208 TM4SF18Q96CE8 201 aa21.12■□□□□ 0.97
BRF1-216ENST00000550208 THOC3Q96J01 351 aaKnown RBP21.12■□□□□ 0.97
BRF1-216ENST00000550208 NUDT9Q9BW91 350 aa21.12■□□□□ 0.97
BRF1-216ENST00000550208 ALOXE3Q9BYJ1 711 aa21.12■□□□□ 0.97
BRF1-216ENST00000550208 ZNF71Q9NQZ8 489 aaPredicted RBP21.12■□□□□ 0.97
BRF1-216ENST00000550208 TEX10Q9NXF1 929 aaPredicted RBP21.12■□□□□ 0.97
BRF1-216ENST00000550208 TUBD1Q9UJT1 453 aa21.12■□□□□ 0.97
BRF1-216ENST00000550208 CCL27Q9Y4X3 112 aa21.12■□□□□ 0.97
BRF1-216ENST00000550208 IGSF10Q6WRI0 2623 aa21.11■□□□□ 0.97
BRF1-216ENST00000550208 BLACEA4D250 179 aa21.11■□□□□ 0.97
BRF1-216ENST00000550208 GLOD5A6NK44 160 aa21.11■□□□□ 0.97
BRF1-216ENST00000550208 TMEM114B3SHH9 223 aa21.11■□□□□ 0.97
BRF1-216ENST00000550208 SLC28A1O00337 649 aa21.11■□□□□ 0.97
BRF1-216ENST00000550208 PGRMC2O15173 223 aa21.11■□□□□ 0.97
BRF1-216ENST00000550208 PDGFAP04085 211 aa21.11■□□□□ 0.97
BRF1-216ENST00000550208 LINC00032P0C843 101 aa21.11■□□□□ 0.97
BRF1-216ENST00000550208 NR1D1P20393 614 aa21.11■□□□□ 0.97
BRF1-216ENST00000550208 PPP2R1BP30154 601 aa21.11■□□□□ 0.97
BRF1-216ENST00000550208 BUD31P41223 144 aaPredicted RBP21.11■□□□□ 0.97
BRF1-216ENST00000550208 SLC1A6P48664 564 aa21.11■□□□□ 0.97
BRF1-216ENST00000550208 MAPK12P53778 367 aa21.11■□□□□ 0.97
BRF1-216ENST00000550208 Q6ZSR9 355 aa21.11■□□□□ 0.97
BRF1-216ENST00000550208 C9orf43Q8TAL5 461 aaPredicted RBP21.11■□□□□ 0.97
BRF1-216ENST00000550208 TANKQ92844 425 aa21.11■□□□□ 0.97
BRF1-216ENST00000550208 LPAR4Q99677 370 aa21.11■□□□□ 0.97
BRF1-216ENST00000550208 PNO1Q9NRX1 252 aaKnown RBP21.11■□□□□ 0.97
BRF1-216ENST00000550208 FGF17O60258 216 aa21.1■□□□□ 0.97
BRF1-216ENST00000550208 AIFM1O95831 613 aa21.1■□□□□ 0.97
BRF1-216ENST00000550208 CHEK2O96017 543 aa21.1■□□□□ 0.97
BRF1-216ENST00000550208 SERPINA7P05543 415 aa21.1■□□□□ 0.97
BRF1-216ENST00000550208 PRR35P0CG20 571 aa21.1■□□□□ 0.97
BRF1-216ENST00000550208 SFTPCP11686 197 aa21.1■□□□□ 0.97
BRF1-216ENST00000550208 GRK2P25098 689 aa21.1■□□□□ 0.97
BRF1-216ENST00000550208 ACSM2AQ08AH3 577 aa21.1■□□□□ 0.97
BRF1-216ENST00000550208 STX4Q12846 297 aa21.1■□□□□ 0.97
BRF1-216ENST00000550208 MYBPC3Q14896 1274 aa21.1■□□□□ 0.97
BRF1-216ENST00000550208 SPIN4Q56A73 249 aa21.1■□□□□ 0.97
BRF1-216ENST00000550208 ACSM2BQ68CK6 577 aa21.1■□□□□ 0.97
BRF1-216ENST00000550208 TWIST2Q8WVJ9 160 aa21.1■□□□□ 0.97
BRF1-216ENST00000550208 C11orf24Q96F05 449 aaPredicted RBP21.1■□□□□ 0.97
BRF1-216ENST00000550208 LHPPQ9H008 270 aa21.1■□□□□ 0.97
BRF1-216ENST00000550208 ZNF552Q9H707 407 aaPredicted RBP21.1■□□□□ 0.97
BRF1-216ENST00000550208 GPR83Q9NYM4 423 aa21.1■□□□□ 0.97
BRF1-216ENST00000550208 MCM8Q9UJA3 840 aa21.1■□□□□ 0.97
BRF1-216ENST00000550208 TP53TG5Q9Y2B4 290 aa21.1■□□□□ 0.97
BRF1-216ENST00000550208 PCDHGA9Q9Y5G4 932 aaKnown RBP21.1■□□□□ 0.97
BRF1-216ENST00000550208 PIEZO2Q9H5I5 2752 aa21.1■□□□□ 0.97
BRF1-216ENST00000550208 DOCK10Q96BY6 2186 aa21.1■□□□□ 0.97
BRF1-216ENST00000550208 CHD6Q8TD26 2715 aa21.09■□□□□ 0.97
BRF1-216ENST00000550208 ATMQ13315 3056 aa21.09■□□□□ 0.97
BRF1-216ENST00000550208 PCDH7O60245 1069 aa21.09■□□□□ 0.97
BRF1-216ENST00000550208 NR2F6P10588 404 aa21.09■□□□□ 0.97
BRF1-216ENST00000550208 ICAM2P13598 275 aa21.09■□□□□ 0.97
BRF1-216ENST00000550208 BST1Q10588 318 aa21.09■□□□□ 0.97
BRF1-216ENST00000550208 BTBD16Q32M84 506 aa21.09■□□□□ 0.97
BRF1-216ENST00000550208 TCTN3Q6NUS6 607 aa21.09■□□□□ 0.97
BRF1-216ENST00000550208 RIPOR1Q6ZS17 1223 aa21.09■□□□□ 0.97
BRF1-216ENST00000550208 RNF165Q6ZSG1 346 aa21.09■□□□□ 0.97
BRF1-216ENST00000550208 OR2T11Q8NH01 316 aa21.09■□□□□ 0.97
BRF1-216ENST00000550208 SORT1Q99523 831 aa21.09■□□□□ 0.97
BRF1-216ENST00000550208 SLC25A18Q9H1K4 315 aa21.09■□□□□ 0.97
BRF1-216ENST00000550208 WDR41Q9HAD4 459 aa21.09■□□□□ 0.97
BRF1-216ENST00000550208 SIRT5Q9NXA8 310 aa21.09■□□□□ 0.97
BRF1-216ENST00000550208 HMGB1P1B2RPK0 211 aaPredicted RBP21.08■□□□□ 0.97
BRF1-216ENST00000550208 PIP5K1BO14986 540 aa21.08■□□□□ 0.97
BRF1-216ENST00000550208 RGS14O43566 566 aa21.08■□□□□ 0.97
BRF1-216ENST00000550208 SEC22BO75396 215 aa21.08■□□□□ 0.97
BRF1-216ENST00000550208 RSL1D1O76021 490 aaKnown RBP21.08■□□□□ 0.97
BRF1-216ENST00000550208 IFNA16P05015 189 aa21.08■□□□□ 0.97
BRF1-216ENST00000550208 ITGAMP11215 1152 aa21.08■□□□□ 0.97
BRF1-216ENST00000550208 SLC26A5P58743 744 aa21.08■□□□□ 0.97
BRF1-216ENST00000550208 TRA2BP62995 288 aaKnown RBP21.08■□□□□ 0.97
BRF1-216ENST00000550208 FOLH1Q04609 750 aa21.08■□□□□ 0.97
BRF1-216ENST00000550208 NDUFAF5Q5TEU4 345 aa21.08■□□□□ 0.97
BRF1-216ENST00000550208 PLAG1Q6DJT9 500 aa21.08■□□□□ 0.97
BRF1-216ENST00000550208 GALNT18Q6P9A2 607 aa21.08■□□□□ 0.97
BRF1-216ENST00000550208 DDIASQ8IXT1 998 aa21.08■□□□□ 0.97
BRF1-216ENST00000550208 MMP21Q8N119 569 aa21.08■□□□□ 0.97
BRF1-216ENST00000550208 ZNF781Q8N8C0 355 aa21.08■□□□□ 0.97
BRF1-216ENST00000550208 NFAM1Q8NET5 270 aaPredicted RBP21.08■□□□□ 0.97
BRF1-216ENST00000550208 M1APQ8TC57 530 aa21.08■□□□□ 0.97
BRF1-216ENST00000550208 PSMF1Q92530 271 aa21.08■□□□□ 0.97
BRF1-216ENST00000550208 SMAD5Q99717 465 aaKnown RBP21.08■□□□□ 0.97
BRF1-216ENST00000550208 EBPLQ9BY08 206 aa21.08■□□□□ 0.97
BRF1-216ENST00000550208 ILKAPQ9H0C8 392 aaPredicted RBP21.08■□□□□ 0.97
BRF1-216ENST00000550208 VTI1BQ9UEU0 232 aa21.08■□□□□ 0.97
BRF1-216ENST00000550208 EPB41L3Q9Y2J2 1087 aaPredicted RBP21.08■□□□□ 0.97
BRF1-216ENST00000550208 RAP2CQ9Y3L5 183 aa21.08■□□□□ 0.97
BRF1-216ENST00000550208 PCDHA9Q9Y5H5 950 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms