RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 SLC10A1Q14973 349 aa7.85□□□□□ -1.15
TROAP-208ENST00000548817 EFTUD2Q15029 972 aaKnown RBP eCLIP7.85□□□□□ -1.15
TROAP-208ENST00000548817 ELAVL1Q15717 326 aaKnown RBP7.85□□□□□ -1.15
TROAP-208ENST00000548817 CYP1B1Q16678 543 aa7.85□□□□□ -1.15
TROAP-208ENST00000548817 HIST2H2ACQ16777 129 aaPredicted RBP7.85□□□□□ -1.15
TROAP-208ENST00000548817 TEDDM1Q5T9Z0 273 aa7.85□□□□□ -1.15
TROAP-208ENST00000548817 RNASEH2BQ5TBB1 312 aaKnown RBP7.85□□□□□ -1.15
TROAP-208ENST00000548817 HIST2H2AA3Q6FI13 130 aa7.85□□□□□ -1.15
TROAP-208ENST00000548817 OPN5Q6U736 354 aa7.85□□□□□ -1.15
TROAP-208ENST00000548817 B3GNT6Q6ZMB0 384 aa7.85□□□□□ -1.15
TROAP-208ENST00000548817 RTL4Q6ZR62 310 aa7.85□□□□□ -1.15
TROAP-208ENST00000548817 FAM47EQ6ZV65 393 aa7.85□□□□□ -1.15
TROAP-208ENST00000548817 CLNKQ7Z7G1 428 aa7.85□□□□□ -1.15
TROAP-208ENST00000548817 CNTN4Q8IWV2 1026 aa7.85□□□□□ -1.15
TROAP-208ENST00000548817 KLHDC8AQ8IYD2 350 aa7.85□□□□□ -1.15
TROAP-208ENST00000548817 AGGF1Q8N302 714 aaeCLIP7.85□□□□□ -1.15
TROAP-208ENST00000548817 MORN4Q8NDC4 146 aa7.85□□□□□ -1.15
TROAP-208ENST00000548817 OR2M7Q8NG81 312 aa7.85□□□□□ -1.15
TROAP-208ENST00000548817 OR5M9Q8NGP3 310 aa7.85□□□□□ -1.15
TROAP-208ENST00000548817 OR14A16Q8NHC5 309 aa7.85□□□□□ -1.15
TROAP-208ENST00000548817 ANKRD7Q92527 254 aa7.85□□□□□ -1.15
TROAP-208ENST00000548817 ZNF592Q92610 1267 aa7.85□□□□□ -1.15
TROAP-208ENST00000548817 PIGTQ969N2 578 aa7.85□□□□□ -1.15
TROAP-208ENST00000548817 SARAFQ96BY9 339 aa7.85□□□□□ -1.15
TROAP-208ENST00000548817 SMIM10Q96HG1 83 aa7.85□□□□□ -1.15
TROAP-208ENST00000548817 SGCZQ96LD1 299 aa7.85□□□□□ -1.15
TROAP-208ENST00000548817 SERINC2Q96SA4 455 aa7.85□□□□□ -1.15
TROAP-208ENST00000548817 SMC6Q96SB8 1091 aa7.85□□□□□ -1.15
TROAP-208ENST00000548817 FAM173AQ9BQD7 235 aa7.85□□□□□ -1.15
TROAP-208ENST00000548817 TTYH2Q9BSA4 534 aa7.85□□□□□ -1.15
TROAP-208ENST00000548817 OR8D2Q9GZM6 311 aa7.85□□□□□ -1.15
TROAP-208ENST00000548817 ROGDIQ9GZN7 287 aa7.85□□□□□ -1.15
TROAP-208ENST00000548817 PITHD1Q9GZP4 211 aaPredicted RBP7.85□□□□□ -1.15
TROAP-208ENST00000548817 CNOT10Q9H9A5 744 aaKnown RBP7.85□□□□□ -1.15
TROAP-208ENST00000548817 SACM1LQ9NTJ5 587 aa7.85□□□□□ -1.15
TROAP-208ENST00000548817 MYOTQ9UBF9 498 aa7.85□□□□□ -1.15
TROAP-208ENST00000548817 COPS7AQ9UBW8 275 aa7.85□□□□□ -1.15
TROAP-208ENST00000548817 A0A0G2JNJ9 132 aa7.84□□□□□ -1.15
TROAP-208ENST00000548817 ATP6AP2A0A1C7CYW4 349 aa7.84□□□□□ -1.15
TROAP-208ENST00000548817 NPEPPSL1A6NEC2 478 aa7.84□□□□□ -1.15
TROAP-208ENST00000548817 G3V3Y1 287 aa7.84□□□□□ -1.15
TROAP-208ENST00000548817 CDC7O00311 574 aa7.84□□□□□ -1.15
TROAP-208ENST00000548817 SMPD2O60906 423 aa7.84□□□□□ -1.15
TROAP-208ENST00000548817 CTNSO60931 367 aa7.84□□□□□ -1.15
TROAP-208ENST00000548817 WDR1O75083 606 aa7.84□□□□□ -1.15
TROAP-208ENST00000548817 BANF1O75531 89 aa7.84□□□□□ -1.15
TROAP-208ENST00000548817 CLEC3AO75596 197 aa7.84□□□□□ -1.15
TROAP-208ENST00000548817 ATP6AP2O75787 350 aa7.84□□□□□ -1.15
TROAP-208ENST00000548817 OR6B1O95007 311 aa7.84□□□□□ -1.15
TROAP-208ENST00000548817 SIX3O95343 332 aaPredicted RBP7.84□□□□□ -1.15
TROAP-208ENST00000548817 S100BP04271 92 aaPredicted RBP7.84□□□□□ -1.15
TROAP-208ENST00000548817 GLI4P10075 376 aa7.84□□□□□ -1.15
TROAP-208ENST00000548817 COX7A2P14406 83 aa7.84□□□□□ -1.15
TROAP-208ENST00000548817 UQCRC1P31930 480 aa7.84□□□□□ -1.15
TROAP-208ENST00000548817 SOX3P41225 446 aa7.84□□□□□ -1.15
TROAP-208ENST00000548817 MTTPP55157 894 aa7.84□□□□□ -1.15
TROAP-208ENST00000548817 CDKL1Q00532 357 aa7.84□□□□□ -1.15
TROAP-208ENST00000548817 ILF2Q12905 390 aaKnown RBP7.84□□□□□ -1.15
TROAP-208ENST00000548817 RUNX2Q13950 521 aa7.84□□□□□ -1.15
TROAP-208ENST00000548817 SERTAD2Q14140 314 aa7.84□□□□□ -1.15
TROAP-208ENST00000548817 ZNF750Q32MQ0 723 aa7.84□□□□□ -1.15
TROAP-208ENST00000548817 WLSQ5T9L3 541 aa7.84□□□□□ -1.15
TROAP-208ENST00000548817 SBSNQ6UWP8 590 aa7.84□□□□□ -1.15
TROAP-208ENST00000548817 ADAMTSL2Q86TH1 951 aa7.84□□□□□ -1.15
TROAP-208ENST00000548817 SCUBE1Q8IWY4 988 aa7.84□□□□□ -1.15
TROAP-208ENST00000548817 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.84□□□□□ -1.15
TROAP-208ENST00000548817 TCAIMQ8N3R3 496 aa7.84□□□□□ -1.15
TROAP-208ENST00000548817 SNX31Q8N9S9 440 aa7.84□□□□□ -1.15
TROAP-208ENST00000548817 FAM47BQ8NA70 645 aa7.84□□□□□ -1.15
TROAP-208ENST00000548817 SRFBP1Q8NEF9 429 aaKnown RBP7.84□□□□□ -1.15
TROAP-208ENST00000548817 OR2L5Q8NG80 312 aa7.84□□□□□ -1.15
TROAP-208ENST00000548817 SREK1Q8WXA9 508 aaKnown RBP7.84□□□□□ -1.15
TROAP-208ENST00000548817 RNASE6Q93091 150 aaKnown RBP7.84□□□□□ -1.15
TROAP-208ENST00000548817 MS4A6EQ96DS6 147 aa7.84□□□□□ -1.15
TROAP-208ENST00000548817 RUNDC3BQ96NL0 473 aa7.84□□□□□ -1.15
TROAP-208ENST00000548817 ALOXE3Q9BYJ1 711 aa7.84□□□□□ -1.15
TROAP-208ENST00000548817 TTTY12Q9BZ98 90 aa7.84□□□□□ -1.15
TROAP-208ENST00000548817 REXO4Q9GZR2 422 aaKnown RBP7.84□□□□□ -1.15
TROAP-208ENST00000548817 NT5DC2Q9H857 520 aa7.84□□□□□ -1.15
TROAP-208ENST00000548817 LIN28AQ9H9Z2 209 aaKnown RBP7.84□□□□□ -1.15
TROAP-208ENST00000548817 IL1RL2Q9HB29 575 aa7.84□□□□□ -1.15
TROAP-208ENST00000548817 PNPLA3Q9NST1 481 aa7.84□□□□□ -1.15
TROAP-208ENST00000548817 Q9UFV3 132 aa7.84□□□□□ -1.15
TROAP-208ENST00000548817 PPIEQ9UNP9 301 aaKnown RBP7.84□□□□□ -1.15
TROAP-208ENST00000548817 PPP2R2CQ9Y2T4 447 aa7.84□□□□□ -1.15
TROAP-208ENST00000548817 OARD1Q9Y530 152 aa7.84□□□□□ -1.15
TROAP-208ENST00000548817 FAM95CA0A1B0GW59 222 aa7.83□□□□□ -1.16
TROAP-208ENST00000548817 LRIT2A6NDA9 550 aa7.83□□□□□ -1.16
TROAP-208ENST00000548817 C17orf105B2RV13 164 aa7.83□□□□□ -1.16
TROAP-208ENST00000548817 PHF1O43189 567 aaPredicted RBP7.83□□□□□ -1.16
TROAP-208ENST00000548817 GABRA1P14867 456 aa7.83□□□□□ -1.16
TROAP-208ENST00000548817 PPP2R1BP30154 601 aa7.83□□□□□ -1.16
TROAP-208ENST00000548817 HNRNPH1P31943 449 aaKnown RBP7.83□□□□□ -1.16
TROAP-208ENST00000548817 ELK3P41970 407 aa7.83□□□□□ -1.16
TROAP-208ENST00000548817 ASCL1P50553 236 aa7.83□□□□□ -1.16
TROAP-208ENST00000548817 GPR143P51810 404 aa7.83□□□□□ -1.16
TROAP-208ENST00000548817 PGGT1BP53609 377 aa7.83□□□□□ -1.16
TROAP-208ENST00000548817 ARL4CP56559 192 aa7.83□□□□□ -1.16
TROAP-208ENST00000548817 MGAT5Q09328 741 aa7.83□□□□□ -1.16
TROAP-208ENST00000548817 TBL3Q12788 808 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms