RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 OR2M7Q8NG81 312 aa16.14■□□□□ 0.17
CHMP1A-205ENST00000548650 OR52N2Q8NGI0 321 aa16.14■□□□□ 0.17
CHMP1A-205ENST00000548650 OR8K3Q8NH51 312 aa16.14■□□□□ 0.17
CHMP1A-205ENST00000548650 SLC2A12Q8TD20 617 aa16.14■□□□□ 0.17
CHMP1A-205ENST00000548650 FBF1Q8TES7 1133 aa16.14■□□□□ 0.17
CHMP1A-205ENST00000548650 UBE2E3Q969T4 207 aa16.14■□□□□ 0.17
CHMP1A-205ENST00000548650 LURAP1Q96LR2 239 aa16.14■□□□□ 0.17
CHMP1A-205ENST00000548650 ALOXE3Q9BYJ1 711 aa16.14■□□□□ 0.17
CHMP1A-205ENST00000548650 OPTCQ9UBM4 332 aa16.14■□□□□ 0.17
CHMP1A-205ENST00000548650 HRH3Q9Y5N1 445 aa16.14■□□□□ 0.17
CHMP1A-205ENST00000548650 F8P00451 2351 aa16.14■□□□□ 0.17
CHMP1A-205ENST00000548650 HCFC1P51610 2035 aa16.14■□□□□ 0.17
CHMP1A-205ENST00000548650 TACC2O95359 2948 aa16.13■□□□□ 0.17
CHMP1A-205ENST00000548650 K7EPI3 171 aa16.13■□□□□ 0.17
CHMP1A-205ENST00000548650 ZNF354AO60765 605 aaPredicted RBP16.13■□□□□ 0.17
CHMP1A-205ENST00000548650 SH3BGRLO75368 114 aa16.13■□□□□ 0.17
CHMP1A-205ENST00000548650 LTA4HP09960 611 aaKnown RBP16.13■□□□□ 0.17
CHMP1A-205ENST00000548650 PCNAP12004 261 aa16.13■□□□□ 0.17
CHMP1A-205ENST00000548650 MTHFD2P13995 350 aa16.13■□□□□ 0.17
CHMP1A-205ENST00000548650 SSR2P43308 183 aa16.13■□□□□ 0.17
CHMP1A-205ENST00000548650 MAGEA4P43358 317 aa16.13■□□□□ 0.17
CHMP1A-205ENST00000548650 IGLV3-21P80748 117 aaPredicted RBP16.13■□□□□ 0.17
CHMP1A-205ENST00000548650 CAV1Q03135 178 aa16.13■□□□□ 0.17
CHMP1A-205ENST00000548650 NAB1Q13506 487 aa16.13■□□□□ 0.17
CHMP1A-205ENST00000548650 KHDRBS2Q5VWX1 349 aaKnown RBP16.13■□□□□ 0.17
CHMP1A-205ENST00000548650 GRHL2Q6ISB3 625 aa16.13■□□□□ 0.17
CHMP1A-205ENST00000548650 ARHGAP11AQ6P4F7 1023 aa16.13■□□□□ 0.17
CHMP1A-205ENST00000548650 IL20RBQ6UXL0 311 aa16.13■□□□□ 0.17
CHMP1A-205ENST00000548650 TBC1D1Q86TI0 1168 aaPredicted RBP16.13■□□□□ 0.17
CHMP1A-205ENST00000548650 CENPLQ8N0S6 344 aaPredicted RBP16.13■□□□□ 0.17
CHMP1A-205ENST00000548650 OR7G3Q8NG95 312 aa16.13■□□□□ 0.17
CHMP1A-205ENST00000548650 ANKRD9Q96BM1 317 aaPredicted RBP16.13■□□□□ 0.17
CHMP1A-205ENST00000548650 SDCCAG3Q96C92 435 aa16.13■□□□□ 0.17
CHMP1A-205ENST00000548650 RAB17Q9H0T7 212 aa16.13■□□□□ 0.17
CHMP1A-205ENST00000548650 NMRAL1Q9HBL8 299 aa16.13■□□□□ 0.17
CHMP1A-205ENST00000548650 UTP11Q9Y3A2 253 aaKnown RBP16.13■□□□□ 0.17
CHMP1A-205ENST00000548650 ANKRD17O75179 2603 aaKnown RBP16.12■□□□□ 0.17
CHMP1A-205ENST00000548650 FAM166BA8MTA8 275 aa16.12■□□□□ 0.17
CHMP1A-205ENST00000548650 SAP18O00422 153 aaKnown RBP16.12■□□□□ 0.17
CHMP1A-205ENST00000548650 FGF17O60258 216 aa16.12■□□□□ 0.17
CHMP1A-205ENST00000548650 ETHE1O95571 254 aa16.12■□□□□ 0.17
CHMP1A-205ENST00000548650 TGFB1P01137 390 aa16.12■□□□□ 0.17
CHMP1A-205ENST00000548650 CRABP2P29373 138 aa16.12■□□□□ 0.17
CHMP1A-205ENST00000548650 RNF4P78317 190 aa16.12■□□□□ 0.17
CHMP1A-205ENST00000548650 IRF9Q00978 393 aa16.12■□□□□ 0.17
CHMP1A-205ENST00000548650 GUCY2DQ02846 1103 aa16.12■□□□□ 0.17
CHMP1A-205ENST00000548650 RNF175Q8N4F7 328 aa16.12■□□□□ 0.17
CHMP1A-205ENST00000548650 ZNF721Q8TF20 911 aa16.12■□□□□ 0.17
CHMP1A-205ENST00000548650 KCTD4Q8WVF5 259 aa16.12■□□□□ 0.17
CHMP1A-205ENST00000548650 SCYL1Q96KG9 808 aa16.12■□□□□ 0.17
CHMP1A-205ENST00000548650 SORBS1Q9BX66 1292 aaKnown RBP16.12■□□□□ 0.17
CHMP1A-205ENST00000548650 TTTY12Q9BZ98 90 aa16.12■□□□□ 0.17
CHMP1A-205ENST00000548650 ZDHHC11Q9H8X9 412 aa16.12■□□□□ 0.17
CHMP1A-205ENST00000548650 SPACA6W5XKT8 324 aa16.12■□□□□ 0.17
CHMP1A-205ENST00000548650 INTS1Q8N201 2190 aaKnown RBP16.11■□□□□ 0.17
CHMP1A-205ENST00000548650 G3V3Y1 287 aa16.11■□□□□ 0.17
CHMP1A-205ENST00000548650 GLSO94925 669 aaPredicted RBP16.11■□□□□ 0.17
CHMP1A-205ENST00000548650 CPN2P22792 545 aa16.11■□□□□ 0.17
CHMP1A-205ENST00000548650 PPIAP62937 165 aaKnown RBP16.11■□□□□ 0.17
CHMP1A-205ENST00000548650 SETDB1Q15047 1291 aa16.11■□□□□ 0.17
CHMP1A-205ENST00000548650 AP5B1Q2VPB7 878 aa16.11■□□□□ 0.17
CHMP1A-205ENST00000548650 EMC4Q5J8M3 183 aa16.11■□□□□ 0.17
CHMP1A-205ENST00000548650 RTL4Q6ZR62 310 aa16.11■□□□□ 0.17
CHMP1A-205ENST00000548650 CHSY3Q70JA7 882 aa16.11■□□□□ 0.17
CHMP1A-205ENST00000548650 RPRMLQ8N4K4 120 aa16.11■□□□□ 0.17
CHMP1A-205ENST00000548650 GOLM1Q8NBJ4 401 aa16.11■□□□□ 0.17
CHMP1A-205ENST00000548650 HUS1BQ8NHY5 278 aa16.11■□□□□ 0.17
CHMP1A-205ENST00000548650 CA5BP1Q8WTZ4 195 aa16.11■□□□□ 0.17
CHMP1A-205ENST00000548650 NXNL1Q96CM4 212 aa16.11■□□□□ 0.17
CHMP1A-205ENST00000548650 CMTM7Q96FZ5 175 aa16.11■□□□□ 0.17
CHMP1A-205ENST00000548650 SPOCK3Q9BQ16 436 aa16.11■□□□□ 0.17
CHMP1A-205ENST00000548650 TREX2Q9BQ50 279 aaPredicted RBP16.11■□□□□ 0.17
CHMP1A-205ENST00000548650 ENKD1Q9H0I2 346 aa16.11■□□□□ 0.17
CHMP1A-205ENST00000548650 OR51B5Q9H339 312 aa16.11■□□□□ 0.17
CHMP1A-205ENST00000548650 TP63Q9H3D4 680 aaPredicted RBP16.11■□□□□ 0.17
CHMP1A-205ENST00000548650 DMRT3Q9NQL9 472 aa16.11■□□□□ 0.17
CHMP1A-205ENST00000548650 COPS7AQ9UBW8 275 aa16.11■□□□□ 0.17
CHMP1A-205ENST00000548650 LIPGQ9Y5X9 500 aa16.11■□□□□ 0.17
CHMP1A-205ENST00000548650 AKAP9Q99996 3911 aa16.11■□□□□ 0.17
CHMP1A-205ENST00000548650 NCKAP5O14513 1909 aa16.11■□□□□ 0.17
CHMP1A-205ENST00000548650 HMX2A2RU54 273 aa16.1■□□□□ 0.17
CHMP1A-205ENST00000548650 ACOT7O00154 380 aa16.1■□□□□ 0.17
CHMP1A-205ENST00000548650 PLPP1O14494 284 aa16.1■□□□□ 0.17
CHMP1A-205ENST00000548650 PDE9AO76083 593 aa16.1■□□□□ 0.17
CHMP1A-205ENST00000548650 IGKV3-11P04433 115 aa16.1■□□□□ 0.17
CHMP1A-205ENST00000548650 EPB42P16452 691 aa16.1■□□□□ 0.17
CHMP1A-205ENST00000548650 TNNI3P19429 210 aa16.1■□□□□ 0.17
CHMP1A-205ENST00000548650 STT3AP46977 705 aa16.1■□□□□ 0.17
CHMP1A-205ENST00000548650 TNFRSF17Q02223 184 aa16.1■□□□□ 0.17
CHMP1A-205ENST00000548650 PLGLB1Q02325 96 aa16.1■□□□□ 0.17
CHMP1A-205ENST00000548650 DDX39BQ13838 428 aaKnown RBP16.1■□□□□ 0.17
CHMP1A-205ENST00000548650 ZNF750Q32MQ0 723 aa16.1■□□□□ 0.17
CHMP1A-205ENST00000548650 DEPDC1Q5TB30 811 aa16.1■□□□□ 0.17
CHMP1A-205ENST00000548650 GK5Q6ZS86 529 aa16.1■□□□□ 0.17
CHMP1A-205ENST00000548650 ZNF572Q7Z3I7 529 aaPredicted RBP16.1■□□□□ 0.17
CHMP1A-205ENST00000548650 C9orf40Q8IXQ3 194 aa16.1■□□□□ 0.17
CHMP1A-205ENST00000548650 C17orf53Q8N3J3 647 aaPredicted RBP16.1■□□□□ 0.17
CHMP1A-205ENST00000548650 TEX9Q8N6V9 391 aa16.1■□□□□ 0.17
CHMP1A-205ENST00000548650 OR5L2Q8NGL0 311 aa16.1■□□□□ 0.17
CHMP1A-205ENST00000548650 RHEBL1Q8TAI7 183 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms