RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 A0A1W2PPB8 328 aa12.38□□□□□ -0.43
CPSF6-204ENST00000547486 A0A1W2PRS3 328 aa12.38□□□□□ -0.43
CPSF6-204ENST00000547486 ENO4A6NNW6 628 aa12.38□□□□□ -0.43
CPSF6-204ENST00000547486 WASHC1A8K0Z3 465 aa12.38□□□□□ -0.43
CPSF6-204ENST00000547486 A8MVJ9 347 aa12.38□□□□□ -0.43
CPSF6-204ENST00000547486 KIR3DP1A8MWS1 328 aa12.38□□□□□ -0.43
CPSF6-204ENST00000547486 C17orf105B2RV13 164 aa12.38□□□□□ -0.43
CPSF6-204ENST00000547486 E9PLN8 166 aa12.38□□□□□ -0.43
CPSF6-204ENST00000547486 G3V3Y1 287 aa12.38□□□□□ -0.43
CPSF6-204ENST00000547486 PRRG2O14669 202 aa12.38□□□□□ -0.43
CPSF6-204ENST00000547486 TFECO14948 347 aaPredicted RBP12.38□□□□□ -0.43
CPSF6-204ENST00000547486 FGF17O60258 216 aa12.38□□□□□ -0.43
CPSF6-204ENST00000547486 CDC40O60508 579 aaKnown RBP eCLIP12.38□□□□□ -0.433e-8■■□□□ 12.1
CPSF6-204ENST00000547486 PTGS2P35354 604 aa12.38□□□□□ -0.43
CPSF6-204ENST00000547486 SOX3P41225 446 aa12.38□□□□□ -0.43
CPSF6-204ENST00000547486 RNF4P78317 190 aa12.38□□□□□ -0.43
CPSF6-204ENST00000547486 NAB1Q13506 487 aa12.38□□□□□ -0.43
CPSF6-204ENST00000547486 DDX39BQ13838 428 aaKnown RBP12.38□□□□□ -0.43
CPSF6-204ENST00000547486 RCN2Q14257 317 aa12.38□□□□□ -0.43
CPSF6-204ENST00000547486 AP5B1Q2VPB7 878 aa12.38□□□□□ -0.43
CPSF6-204ENST00000547486 OR4C11Q6IEV9 310 aa12.38□□□□□ -0.43
CPSF6-204ENST00000547486 GRHL2Q6ISB3 625 aa12.38□□□□□ -0.43
CPSF6-204ENST00000547486 ZNF295-AS1Q8N0V1 137 aa12.38□□□□□ -0.43
CPSF6-204ENST00000547486 MARVELD2Q8N4S9 558 aa12.38□□□□□ -0.43
CPSF6-204ENST00000547486 PSD4Q8NDX1 1056 aa12.38□□□□□ -0.43
CPSF6-204ENST00000547486 RHEBL1Q8TAI7 183 aa12.38□□□□□ -0.43
CPSF6-204ENST00000547486 SLC2A12Q8TD20 617 aa12.38□□□□□ -0.43
CPSF6-204ENST00000547486 ZNF721Q8TF20 911 aa12.38□□□□□ -0.43
CPSF6-204ENST00000547486 DAZLQ92904 295 aaKnown RBP12.38□□□□□ -0.43
CPSF6-204ENST00000547486 UBE2E3Q969T4 207 aa12.38□□□□□ -0.43
CPSF6-204ENST00000547486 PPWD1Q96BP3 646 aaKnown RBP12.38□□□□□ -0.43
CPSF6-204ENST00000547486 CMTM7Q96FZ5 175 aa12.38□□□□□ -0.43
CPSF6-204ENST00000547486 VKORC1Q9BQB6 163 aa12.38□□□□□ -0.43
CPSF6-204ENST00000547486 DEFB127Q9H1M4 99 aa12.38□□□□□ -0.43
CPSF6-204ENST00000547486 SNX15Q9NRS6 342 aa12.38□□□□□ -0.43
CPSF6-204ENST00000547486 HPF1Q9NWY4 346 aa12.38□□□□□ -0.43
CPSF6-204ENST00000547486 APCP25054 2843 aa12.37□□□□□ -0.43
CPSF6-204ENST00000547486 A0A087X1B8 175 aa12.37□□□□□ -0.43
CPSF6-204ENST00000547486 HRKO00198 91 aa12.37□□□□□ -0.43
CPSF6-204ENST00000547486 PLPP1O14494 284 aa12.37□□□□□ -0.43
CPSF6-204ENST00000547486 PRKRAO75569 313 aaKnown RBP12.37□□□□□ -0.43
CPSF6-204ENST00000547486 CLDN14O95500 239 aa12.37□□□□□ -0.43
CPSF6-204ENST00000547486 TUBB4AP04350 444 aa12.37□□□□□ -0.43
CPSF6-204ENST00000547486 EPB42P16452 691 aa12.37□□□□□ -0.43
CPSF6-204ENST00000547486 CPN2P22792 545 aa12.37□□□□□ -0.43
CPSF6-204ENST00000547486 SSR2P43308 183 aa12.37□□□□□ -0.43
CPSF6-204ENST00000547486 IGLV3-21P80748 117 aaPredicted RBP12.37□□□□□ -0.43
CPSF6-204ENST00000547486 SERTAD2Q14140 314 aa12.37□□□□□ -0.43
CPSF6-204ENST00000547486 NAA30Q147X3 362 aaPredicted RBP12.37□□□□□ -0.43
CPSF6-204ENST00000547486 SETDB1Q15047 1291 aa12.37□□□□□ -0.43
CPSF6-204ENST00000547486 PFKFB4Q16877 469 aa12.37□□□□□ -0.43
CPSF6-204ENST00000547486 C18orf63Q68DL7 685 aa12.37□□□□□ -0.43
CPSF6-204ENST00000547486 GPALPP1Q8IXQ4 340 aa12.37□□□□□ -0.43
CPSF6-204ENST00000547486 OR2M7Q8NG81 312 aa12.37□□□□□ -0.43
CPSF6-204ENST00000547486 OR14A16Q8NHC5 309 aa12.37□□□□□ -0.43
CPSF6-204ENST00000547486 FAM57AQ8TBR7 257 aa12.37□□□□□ -0.43
CPSF6-204ENST00000547486 DOK4Q8TEW6 326 aa12.37□□□□□ -0.43
CPSF6-204ENST00000547486 ASB15Q8WXK1 588 aa12.37□□□□□ -0.43
CPSF6-204ENST00000547486 UCN3Q969E3 161 aa12.37□□□□□ -0.43
CPSF6-204ENST00000547486 MTFMTQ96DP5 389 aaKnown RBP12.37□□□□□ -0.43
CPSF6-204ENST00000547486 SCYL1Q96KG9 808 aa12.37□□□□□ -0.43
CPSF6-204ENST00000547486 MTERF1Q99551 399 aaKnown RBP12.37□□□□□ -0.43
CPSF6-204ENST00000547486 ZNF717Q9BY31 904 aaPredicted RBP12.37□□□□□ -0.43
CPSF6-204ENST00000547486 TRIM8Q9BZR9 551 aa12.37□□□□□ -0.43
CPSF6-204ENST00000547486 PRM3Q9NNZ6 103 aa12.37□□□□□ -0.43
CPSF6-204ENST00000547486 DMRT3Q9NQL9 472 aa12.37□□□□□ -0.43
CPSF6-204ENST00000547486 PLSCR2Q9NRY7 297 aa12.37□□□□□ -0.43
CPSF6-204ENST00000547486 ATG4BQ9Y4P1 393 aa12.37□□□□□ -0.43
CPSF6-204ENST00000547486 ADGRG4Q8IZF6 3080 aa12.36□□□□□ -0.43
CPSF6-204ENST00000547486 A0A096LPK6 155 aa12.36□□□□□ -0.43
CPSF6-204ENST00000547486 SYCE1LA8MT33 242 aa12.36□□□□□ -0.43
CPSF6-204ENST00000547486 FAM166BA8MTA8 275 aa12.36□□□□□ -0.43
CPSF6-204ENST00000547486 KLK8O60259 260 aa12.36□□□□□ -0.43
CPSF6-204ENST00000547486 KLHL2O95198 593 aa12.36□□□□□ -0.43
CPSF6-204ENST00000547486 SIX3O95343 332 aaPredicted RBP12.36□□□□□ -0.43
CPSF6-204ENST00000547486 ALDOAP04075 364 aaKnown RBP12.36□□□□□ -0.43
CPSF6-204ENST00000547486 TPOP07202 933 aa12.36□□□□□ -0.43
CPSF6-204ENST00000547486 COX6B1P14854 86 aa12.36□□□□□ -0.43
CPSF6-204ENST00000547486 SERPINB1P30740 379 aa12.36□□□□□ -0.43
CPSF6-204ENST00000547486 PIK3CBP42338 1070 aa12.36□□□□□ -0.43
CPSF6-204ENST00000547486 STT3AP46977 705 aa12.36□□□□□ -0.43
CPSF6-204ENST00000547486 NEK2P51955 445 aa12.36□□□□□ -0.43
CPSF6-204ENST00000547486 HNRNPH2P55795 449 aaKnown RBP12.36□□□□□ -0.43
CPSF6-204ENST00000547486 RPS13P62277 151 aaKnown RBP12.36□□□□□ -0.43
CPSF6-204ENST00000547486 PPIAP62937 165 aaKnown RBP12.36□□□□□ -0.43
CPSF6-204ENST00000547486 ACAP2Q15057 778 aa12.36□□□□□ -0.43
CPSF6-204ENST00000547486 FAM83EQ2M2I3 478 aa12.36□□□□□ -0.43
CPSF6-204ENST00000547486 EMC4Q5J8M3 183 aa12.36□□□□□ -0.43
CPSF6-204ENST00000547486 LIPJQ5W064 366 aa12.36□□□□□ -0.43
CPSF6-204ENST00000547486 GPR180Q86V85 440 aa12.36□□□□□ -0.43
CPSF6-204ENST00000547486 CD163Q86VB7 1156 aa12.36□□□□□ -0.43
CPSF6-204ENST00000547486 MYLK4Q86YV6 388 aaPredicted RBP12.36□□□□□ -0.43
CPSF6-204ENST00000547486 PLD6Q8N2A8 252 aaKnown RBP12.36□□□□□ -0.43
CPSF6-204ENST00000547486 RPRMLQ8N4K4 120 aa12.36□□□□□ -0.43
CPSF6-204ENST00000547486 OR8K3Q8NH51 312 aa12.36□□□□□ -0.43
CPSF6-204ENST00000547486 PHF10Q8WUB8 498 aaKnown RBP12.36□□□□□ -0.43
CPSF6-204ENST00000547486 RGMAQ96B86 450 aa12.36□□□□□ -0.43
CPSF6-204ENST00000547486 SENP5Q96HI0 755 aaPredicted RBP12.36□□□□□ -0.43
CPSF6-204ENST00000547486 RUBCNLQ9H714 662 aa12.36□□□□□ -0.43
CPSF6-204ENST00000547486 RPF2Q9H7B2 306 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms