RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 ALOXE3Q9BYJ1 711 aa14.84□□□□□ -0.03
DDX54-204ENST00000546898 CDCP1Q9H5V8 836 aa14.84□□□□□ -0.03
DDX54-204ENST00000546898 RPF2Q9H7B2 306 aaKnown RBP14.84□□□□□ -0.03
DDX54-204ENST00000546898 AHSPQ9NZD4 102 aa14.84□□□□□ -0.03
DDX54-204ENST00000546898 SNX6Q9UNH7 406 aa14.84□□□□□ -0.03
DDX54-204ENST00000546898 CLCA3PQ9Y6N3 262 aa14.84□□□□□ -0.03
DDX54-204ENST00000546898 TRBV11-1A0A0K0K1C0 115 aa14.83□□□□□ -0.04
DDX54-204ENST00000546898 A0A1W2PPM1 405 aa14.83□□□□□ -0.04
DDX54-204ENST00000546898 FCHO1O14526 889 aa14.83□□□□□ -0.04
DDX54-204ENST00000546898 LDB3O75112 727 aa14.83□□□□□ -0.04
DDX54-204ENST00000546898 CBX6O95503 412 aa14.83□□□□□ -0.04
DDX54-204ENST00000546898 IFNA16P05015 189 aa14.83□□□□□ -0.04
DDX54-204ENST00000546898 NUDT17P0C025 328 aa14.83□□□□□ -0.04
DDX54-204ENST00000546898 CCT5P48643 541 aa14.83□□□□□ -0.04
DDX54-204ENST00000546898 GPR143P51810 404 aa14.83□□□□□ -0.04
DDX54-204ENST00000546898 PRKAA2P54646 552 aa14.83□□□□□ -0.04
DDX54-204ENST00000546898 HNRNPH2P55795 449 aaKnown RBP14.83□□□□□ -0.04
DDX54-204ENST00000546898 MLF1P58340 268 aa14.83□□□□□ -0.04
DDX54-204ENST00000546898 NAA20P61599 178 aa14.83□□□□□ -0.04
DDX54-204ENST00000546898 ELOAQ14241 798 aaKnown RBP14.83□□□□□ -0.04
DDX54-204ENST00000546898 NR6A1Q15406 480 aa14.83□□□□□ -0.04
DDX54-204ENST00000546898 CCDC153Q494R4 210 aa14.83□□□□□ -0.04
DDX54-204ENST00000546898 UNC50Q53HI1 259 aa14.83□□□□□ -0.04
DDX54-204ENST00000546898 ZNF766Q5HY98 468 aa14.83□□□□□ -0.04
DDX54-204ENST00000546898 LETMD1Q6P1Q0 360 aa14.83□□□□□ -0.04
DDX54-204ENST00000546898 EMBQ6PCB8 327 aa14.83□□□□□ -0.04
DDX54-204ENST00000546898 SH2D5Q6ZV89 423 aa14.83□□□□□ -0.04
DDX54-204ENST00000546898 PAGE2Q7Z2X7 111 aa14.83□□□□□ -0.04
DDX54-204ENST00000546898 MORN4Q8NDC4 146 aa14.83□□□□□ -0.04
DDX54-204ENST00000546898 ST6GALNAC3Q8NDV1 305 aa14.83□□□□□ -0.04
DDX54-204ENST00000546898 MDS2Q8NDY4 140 aa14.83□□□□□ -0.04
DDX54-204ENST00000546898 EPS8L3Q8TE67 593 aaKnown RBP14.83□□□□□ -0.04
DDX54-204ENST00000546898 TRPC4APQ8TEL6 797 aa14.83□□□□□ -0.04
DDX54-204ENST00000546898 TANKQ92844 425 aa14.83□□□□□ -0.04
DDX54-204ENST00000546898 NCLNQ969V3 563 aa14.83□□□□□ -0.04
DDX54-204ENST00000546898 WDR41Q9HAD4 459 aa14.83□□□□□ -0.04
DDX54-204ENST00000546898 BRF2Q9HAW0 419 aa14.83□□□□□ -0.04
DDX54-204ENST00000546898 ADAM29Q9UKF5 820 aa14.83□□□□□ -0.04
DDX54-204ENST00000546898 EMCNQ9ULC0 261 aa14.83□□□□□ -0.04
DDX54-204ENST00000546898 SPTAN1Q13813 2472 aaKnown RBP14.82□□□□□ -0.04
DDX54-204ENST00000546898 A0A1B0GTL3 188 aa14.82□□□□□ -0.04
DDX54-204ENST00000546898 SMIM23A6NLE4 172 aa14.82□□□□□ -0.04
DDX54-204ENST00000546898 PROM1O43490 865 aa14.82□□□□□ -0.04
DDX54-204ENST00000546898 FGF17O60258 216 aa14.82□□□□□ -0.04
DDX54-204ENST00000546898 MAN1A2O60476 641 aa14.82□□□□□ -0.04
DDX54-204ENST00000546898 EEDO75530 441 aaKnown RBP14.82□□□□□ -0.04
DDX54-204ENST00000546898 OR4F21O95013 312 aa14.82□□□□□ -0.04
DDX54-204ENST00000546898 RASAL1O95294 804 aa14.82□□□□□ -0.04
DDX54-204ENST00000546898 MLYCDO95822 493 aa14.82□□□□□ -0.04
DDX54-204ENST00000546898 FAM58BPP0C7Q3 252 aa14.82□□□□□ -0.04
DDX54-204ENST00000546898 NR2F6P10588 404 aa14.82□□□□□ -0.04
DDX54-204ENST00000546898 EDN3P14138 238 aa14.82□□□□□ -0.04
DDX54-204ENST00000546898 COX7A2P14406 83 aa14.82□□□□□ -0.04
DDX54-204ENST00000546898 TSPAN8P19075 237 aa14.82□□□□□ -0.04
DDX54-204ENST00000546898 TPP2P29144 1249 aaPredicted RBP14.82□□□□□ -0.04
DDX54-204ENST00000546898 TRHRP34981 398 aaPredicted RBP14.82□□□□□ -0.04
DDX54-204ENST00000546898 MRPL49Q13405 166 aaKnown RBP14.82□□□□□ -0.04
DDX54-204ENST00000546898 UBAP2LQ14157 1087 aaKnown RBP14.82□□□□□ -0.04
DDX54-204ENST00000546898 OR1C1Q15619 314 aa14.82□□□□□ -0.04
DDX54-204ENST00000546898 FHL5Q5TD97 284 aa14.82□□□□□ -0.04
DDX54-204ENST00000546898 TMEM178AQ8NBL3 297 aa14.82□□□□□ -0.04
DDX54-204ENST00000546898 RDH11Q8TC12 318 aa14.82□□□□□ -0.04
DDX54-204ENST00000546898 AENQ8WTP8 325 aaKnown RBP14.82□□□□□ -0.04
DDX54-204ENST00000546898 SELENOMQ8WWX9 145 aa14.82□□□□□ -0.04
DDX54-204ENST00000546898 ANKRD9Q96BM1 317 aaPredicted RBP14.82□□□□□ -0.04
DDX54-204ENST00000546898 MTFMTQ96DP5 389 aaKnown RBP14.82□□□□□ -0.04
DDX54-204ENST00000546898 SLX1AQ9BQ83 275 aa14.82□□□□□ -0.04
DDX54-204ENST00000546898 PELOQ9BRX2 385 aaKnown RBP14.82□□□□□ -0.04
DDX54-204ENST00000546898 TRIM45Q9H8W5 580 aaPredicted RBP14.82□□□□□ -0.04
DDX54-204ENST00000546898 OLAHQ9NV23 265 aa14.82□□□□□ -0.04
DDX54-204ENST00000546898 NMRK1Q9NWW6 199 aa14.82□□□□□ -0.04
DDX54-204ENST00000546898 ZNF225Q9UK10 706 aa14.82□□□□□ -0.04
DDX54-204ENST00000546898 ZNF223Q9UK11 482 aaPredicted RBP14.82□□□□□ -0.04
DDX54-204ENST00000546898 GRID1Q9ULK0 1009 aa14.82□□□□□ -0.04
DDX54-204ENST00000546898 ATG4BQ9Y4P1 393 aa14.82□□□□□ -0.04
DDX54-204ENST00000546898 ASB4Q9Y574 426 aa14.82□□□□□ -0.04
DDX54-204ENST00000546898 ANKUB1A6NFN9 424 aa14.81□□□□□ -0.04
DDX54-204ENST00000546898 ESPNB1AK53 854 aa14.81□□□□□ -0.04
DDX54-204ENST00000546898 C17orf105B2RV13 164 aa14.81□□□□□ -0.04
DDX54-204ENST00000546898 PPP6CO00743 305 aa14.81□□□□□ -0.04
DDX54-204ENST00000546898 COPEO14579 308 aa14.81□□□□□ -0.04
DDX54-204ENST00000546898 TMPRSS11DO60235 418 aa14.81□□□□□ -0.04
DDX54-204ENST00000546898 ZFAND5O76080 213 aa14.81□□□□□ -0.04
DDX54-204ENST00000546898 PDYNP01213 254 aa14.81□□□□□ -0.04
DDX54-204ENST00000546898 CRYABP02511 175 aaKnown RBP14.81□□□□□ -0.04
DDX54-204ENST00000546898 KRT6AP02538 564 aa14.81□□□□□ -0.04
DDX54-204ENST00000546898 PROCP04070 461 aa14.81□□□□□ -0.04
DDX54-204ENST00000546898 KRT6BP04259 564 aa14.81□□□□□ -0.04
DDX54-204ENST00000546898 MYL2P10916 166 aa14.81□□□□□ -0.04
DDX54-204ENST00000546898 HSD3B1P14060 373 aa14.81□□□□□ -0.04
DDX54-204ENST00000546898 CD46P15529 392 aa14.81□□□□□ -0.04
DDX54-204ENST00000546898 HSD3B2P26439 372 aa14.81□□□□□ -0.04
DDX54-204ENST00000546898 CRHR1P34998 444 aa14.81□□□□□ -0.04
DDX54-204ENST00000546898 CD96P40200 585 aa14.81□□□□□ -0.04
DDX54-204ENST00000546898 STT3AP46977 705 aa14.81□□□□□ -0.04
DDX54-204ENST00000546898 KRT6CP48668 564 aa14.81□□□□□ -0.04
DDX54-204ENST00000546898 PKNOX1P55347 436 aa14.81□□□□□ -0.04
DDX54-204ENST00000546898 PLIN5Q00G26 463 aa14.81□□□□□ -0.04
DDX54-204ENST00000546898 OC90Q02509 493 aaPredicted RBP14.81□□□□□ -0.04
DDX54-204ENST00000546898 LCP2Q13094 533 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms