RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 NT5DC2Q9H857 520 aa2.8□□□□□ -1.96
CCDC38-204ENST00000546816 ANAPC5Q9UJX4 755 aa2.8□□□□□ -1.96
CCDC38-204ENST00000546816 C2orf92A0A1B0GVN3 265 aa2.79□□□□□ -1.96
CCDC38-204ENST00000546816 ANKDD1BA6NHY2 528 aa2.79□□□□□ -1.96
CCDC38-204ENST00000546816 NEDD8-MDP1E9PL57 170 aa2.79□□□□□ -1.96
CCDC38-204ENST00000546816 WDR46O15213 610 aaKnown RBP2.79□□□□□ -1.96
CCDC38-204ENST00000546816 B4GAT1O43505 415 aa2.79□□□□□ -1.96
CCDC38-204ENST00000546816 GBAP04062 536 aa2.79□□□□□ -1.96
CCDC38-204ENST00000546816 RPN1P04843 607 aaKnown RBP2.79□□□□□ -1.96
CCDC38-204ENST00000546816 FHP07954 510 aa2.79□□□□□ -1.96
CCDC38-204ENST00000546816 OR9G9P0C7N8 305 aa2.79□□□□□ -1.96
CCDC38-204ENST00000546816 TSPY3P0CV98 308 aa2.79□□□□□ -1.96
CCDC38-204ENST00000546816 TSPY8P0CW00 308 aa2.79□□□□□ -1.96
CCDC38-204ENST00000546816 ACKR3P25106 362 aa2.79□□□□□ -1.96
CCDC38-204ENST00000546816 MDH2P40926 338 aaKnown RBP2.79□□□□□ -1.96
CCDC38-204ENST00000546816 ALDH3B1P43353 468 aa2.79□□□□□ -1.96
CCDC38-204ENST00000546816 FHITP49789 147 aa2.79□□□□□ -1.96
CCDC38-204ENST00000546816 NPY4RP50391 375 aa2.79□□□□□ -1.96
CCDC38-204ENST00000546816 CAPZA1P52907 286 aa2.79□□□□□ -1.96
CCDC38-204ENST00000546816 CETN1Q12798 172 aa2.79□□□□□ -1.96
CCDC38-204ENST00000546816 C9orf129Q5T035 196 aaKnown RBP2.79□□□□□ -1.96
CCDC38-204ENST00000546816 ZNF776Q68DI1 518 aaPredicted RBP2.79□□□□□ -1.96
CCDC38-204ENST00000546816 KRTAP5-7Q6L8G8 165 aa2.79□□□□□ -1.96
CCDC38-204ENST00000546816 DZIP1Q86YF9 867 aaKnown RBP2.79□□□□□ -1.96
CCDC38-204ENST00000546816 ELMOD1Q8N336 334 aa2.79□□□□□ -1.96
CCDC38-204ENST00000546816 SAMD12Q8N8I0 201 aa2.79□□□□□ -1.96
CCDC38-204ENST00000546816 FAM162AQ96A26 154 aa2.79□□□□□ -1.96
CCDC38-204ENST00000546816 ZBED6CLQ96FA7 236 aaPredicted RBP2.79□□□□□ -1.96
CCDC38-204ENST00000546816 CDHR1Q96JP9 859 aa2.79□□□□□ -1.96
CCDC38-204ENST00000546816 PAXXQ9BUH6 204 aa2.79□□□□□ -1.96
CCDC38-204ENST00000546816 AP1M1Q9BXS5 423 aa2.79□□□□□ -1.96
CCDC38-204ENST00000546816 MTIF3Q9H2K0 278 aaKnown RBP2.79□□□□□ -1.96
CCDC38-204ENST00000546816 VIPAS39Q9H9C1 493 aa2.79□□□□□ -1.96
CCDC38-204ENST00000546816 MED17Q9NVC6 651 aa2.79□□□□□ -1.96
CCDC38-204ENST00000546816 CHCHD3Q9NX63 227 aaKnown RBP2.79□□□□□ -1.96
CCDC38-204ENST00000546816 ILVBLA1L0T0 632 aa2.78□□□□□ -1.96
CCDC38-204ENST00000546816 SAP18O00422 153 aaKnown RBP2.78□□□□□ -1.96
CCDC38-204ENST00000546816 IFIT3O14879 490 aaKnown RBP2.78□□□□□ -1.96
CCDC38-204ENST00000546816 APOA4P06727 396 aa2.78□□□□□ -1.96
CCDC38-204ENST00000546816 CCDC159P0C7I6 412 aa2.78□□□□□ -1.96
CCDC38-204ENST00000546816 ELK1P19419 428 aa2.78□□□□□ -1.96
CCDC38-204ENST00000546816 ID1P41134 155 aa2.78□□□□□ -1.96
CCDC38-204ENST00000546816 SPATA19Q7Z5L4 167 aa2.78□□□□□ -1.96
CCDC38-204ENST00000546816 METTL23Q86XA0 190 aa2.78□□□□□ -1.96
CCDC38-204ENST00000546816 SLC22A18ASQ8N1D0 253 aa2.78□□□□□ -1.96
CCDC38-204ENST00000546816 Q8NFD4 153 aa2.78□□□□□ -1.96
CCDC38-204ENST00000546816 BEST4Q8NFU0 473 aa2.78□□□□□ -1.96
CCDC38-204ENST00000546816 U2AF1L4Q8WU68 220 aaKnown RBP2.78□□□□□ -1.96
CCDC38-204ENST00000546816 ERP27Q96DN0 273 aa2.78□□□□□ -1.96
CCDC38-204ENST00000546816 ASB8Q9H765 288 aa2.78□□□□□ -1.96
CCDC38-204ENST00000546816 S100A14Q9HCY8 104 aa2.78□□□□□ -1.96
CCDC38-204ENST00000546816 PDRG1Q9NUG6 133 aa2.78□□□□□ -1.96
CCDC38-204ENST00000546816 PLEKHA6Q9Y2H5 1048 aa2.78□□□□□ -1.96
CCDC38-204ENST00000546816 SLC30A4O14863 429 aa2.77□□□□□ -1.97
CCDC38-204ENST00000546816 TIMM44O43615 452 aa2.77□□□□□ -1.97
CCDC38-204ENST00000546816 FAM58BPP0C7Q3 252 aa2.77□□□□□ -1.97
CCDC38-204ENST00000546816 P0C879 139 aa2.77□□□□□ -1.97
CCDC38-204ENST00000546816 CASTP20810 708 aaKnown RBP2.77□□□□□ -1.97
CCDC38-204ENST00000546816 SOAT1P35610 550 aa2.77□□□□□ -1.97
CCDC38-204ENST00000546816 HMGCLP35914 325 aa2.77□□□□□ -1.97
CCDC38-204ENST00000546816 GP5P40197 560 aa2.77□□□□□ -1.97
CCDC38-204ENST00000546816 IER3P46695 156 aa2.77□□□□□ -1.97
CCDC38-204ENST00000546816 GSG1Q2KHT4 349 aa2.77□□□□□ -1.97
CCDC38-204ENST00000546816 HERC4Q5GLZ8 1057 aaPredicted RBP2.77□□□□□ -1.97
CCDC38-204ENST00000546816 ANKRD46Q86W74 232 aa2.77□□□□□ -1.97
CCDC38-204ENST00000546816 THNSL1Q8IYQ7 743 aa2.77□□□□□ -1.97
CCDC38-204ENST00000546816 UBQLNLQ8IYU4 475 aa2.77□□□□□ -1.97
CCDC38-204ENST00000546816 SEPT8Q92599 483 aa2.77□□□□□ -1.97
CCDC38-204ENST00000546816 SGF29Q96ES7 293 aa2.77□□□□□ -1.97
CCDC38-204ENST00000546816 SIPA1Q96FS4 1042 aa2.77□□□□□ -1.97
CCDC38-204ENST00000546816 ZNF274Q96GC6 653 aaPredicted RBP2.77□□□□□ -1.97
CCDC38-204ENST00000546816 ERGIC2Q96RQ1 377 aa2.77□□□□□ -1.97
CCDC38-204ENST00000546816 PLSCR3Q9NRY6 295 aa2.77□□□□□ -1.97
CCDC38-204ENST00000546816 TERF2IPQ9NYB0 399 aa2.77□□□□□ -1.97
CCDC38-204ENST00000546816 MIS18AQ9NYP9 233 aa2.77□□□□□ -1.97
CCDC38-204ENST00000546816 ADAM22Q9P0K1 906 aa2.77□□□□□ -1.97
CCDC38-204ENST00000546816 RCOR3Q9P2K3 495 aaPredicted RBP2.77□□□□□ -1.97
CCDC38-204ENST00000546816 PFASO15067 1338 aa2.76□□□□□ -1.97
CCDC38-204ENST00000546816 WI2-2373I1.2A0A1W2PRP0 233 aa2.76□□□□□ -1.97
CCDC38-204ENST00000546816 CCDC162PA2VCL2 907 aa2.76□□□□□ -1.97
CCDC38-204ENST00000546816 MCF2LO15068 1137 aa2.76□□□□□ -1.97
CCDC38-204ENST00000546816 SELENOFO60613 162 aa2.76□□□□□ -1.97
CCDC38-204ENST00000546816 PDGFBP01127 241 aaPredicted RBP2.76□□□□□ -1.97
CCDC38-204ENST00000546816 ZFYP08048 801 aaPredicted RBP2.76□□□□□ -1.97
CCDC38-204ENST00000546816 SCG2P13521 617 aa2.76□□□□□ -1.97
CCDC38-204ENST00000546816 FOSL2P15408 326 aa2.76□□□□□ -1.97
CCDC38-204ENST00000546816 PPP2R1AP30153 589 aa2.76□□□□□ -1.97
CCDC38-204ENST00000546816 FKBP1BP68106 108 aa2.76□□□□□ -1.97
CCDC38-204ENST00000546816 PAX2Q02962 417 aa2.76□□□□□ -1.97
CCDC38-204ENST00000546816 LCP2Q13094 533 aa2.76□□□□□ -1.97
CCDC38-204ENST00000546816 PSMD6Q15008 389 aa2.76□□□□□ -1.97
CCDC38-204ENST00000546816 TGIF1Q15583 401 aa2.76□□□□□ -1.97
CCDC38-204ENST00000546816 MSANTD1Q6ZTZ1 278 aa2.76□□□□□ -1.97
CCDC38-204ENST00000546816 SMYD1Q8NB12 490 aa2.76□□□□□ -1.97
CCDC38-204ENST00000546816 CKAP2Q8WWK9 683 aa2.76□□□□□ -1.97
CCDC38-204ENST00000546816 DNASE1L2Q92874 299 aa2.76□□□□□ -1.97
CCDC38-204ENST00000546816 GBP5Q96PP8 586 aa2.76□□□□□ -1.97
CCDC38-204ENST00000546816 MAPKAP1Q9BPZ7 522 aa2.76□□□□□ -1.97
CCDC38-204ENST00000546816 MINDY3Q9H8M7 445 aa2.76□□□□□ -1.97
CCDC38-204ENST00000546816 SLCO1C1Q9NYB5 712 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms