RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 KIRREL3Q8IZU9 778 aa19.23■□□□□ 0.67
HMGA2-211ENST00000545998 TTC9Q92623 222 aa19.23■□□□□ 0.67
HMGA2-211ENST00000545998 FER1L6-AS2Q96M78 137 aa19.23■□□□□ 0.67
HMGA2-211ENST00000545998 CCT7Q99832 543 aa19.23■□□□□ 0.67
HMGA2-211ENST00000545998 ZNF700Q9H0M5 742 aa19.23■□□□□ 0.67
HMGA2-211ENST00000545998 RPF2Q9H7B2 306 aaKnown RBP19.23■□□□□ 0.67
HMGA2-211ENST00000545998 TEX10Q9NXF1 929 aaPredicted RBP19.23■□□□□ 0.67
HMGA2-211ENST00000545998 C19orf25Q9UFG5 118 aaPredicted RBP19.23■□□□□ 0.67
HMGA2-211ENST00000545998 LSM1O15116 133 aaKnown RBP19.22■□□□□ 0.67
HMGA2-211ENST00000545998 SKAP2O75563 359 aaPredicted RBP19.22■□□□□ 0.67
HMGA2-211ENST00000545998 PRKRAO75569 313 aaKnown RBP19.22■□□□□ 0.67
HMGA2-211ENST00000545998 AIFM1O95831 613 aa19.22■□□□□ 0.67
HMGA2-211ENST00000545998 NR2F6P10588 404 aa19.22■□□□□ 0.67
HMGA2-211ENST00000545998 TLX1P31314 330 aaPredicted RBP19.22■□□□□ 0.67
HMGA2-211ENST00000545998 RRADP55042 308 aa19.22■□□□□ 0.67
HMGA2-211ENST00000545998 TRA2BP62995 288 aaKnown RBP19.22■□□□□ 0.67
HMGA2-211ENST00000545998 SLC13A2Q13183 592 aa19.22■□□□□ 0.67
HMGA2-211ENST00000545998 PCOLCEQ15113 449 aa19.22■□□□□ 0.67
HMGA2-211ENST00000545998 HSP90B2PQ58FF3 399 aa19.22■□□□□ 0.67
HMGA2-211ENST00000545998 NDUFAF7Q7L592 441 aa19.22■□□□□ 0.67
HMGA2-211ENST00000545998 FAM76AQ8TAV0 307 aa19.22■□□□□ 0.67
HMGA2-211ENST00000545998 TM4SF18Q96CE8 201 aa19.22■□□□□ 0.67
HMGA2-211ENST00000545998 C3orf30Q96M34 536 aa19.22■□□□□ 0.67
HMGA2-211ENST00000545998 WDR77Q9BQA1 342 aaPredicted RBP19.22■□□□□ 0.67
HMGA2-211ENST00000545998 ING2Q9H160 280 aa19.22■□□□□ 0.67
HMGA2-211ENST00000545998 LRTM1Q9HBL6 345 aa19.22■□□□□ 0.67
HMGA2-211ENST00000545998 PNPOQ9NVS9 261 aa19.22■□□□□ 0.67
HMGA2-211ENST00000545998 C1orf109Q9NX04 203 aa19.22■□□□□ 0.67
HMGA2-211ENST00000545998 CROCCQ5TZA2 2017 aa19.22■□□□□ 0.67
HMGA2-211ENST00000545998 MASP2O00187 686 aa19.21■□□□□ 0.67
HMGA2-211ENST00000545998 SEC22BO75396 215 aa19.21■□□□□ 0.67
HMGA2-211ENST00000545998 HPP00738 406 aa19.21■□□□□ 0.67
HMGA2-211ENST00000545998 JUNP05412 331 aaKnown RBP19.21■□□□□ 0.67
HMGA2-211ENST00000545998 CHAF1BQ13112 559 aa19.21■□□□□ 0.67
HMGA2-211ENST00000545998 NR6A1Q15406 480 aa19.21■□□□□ 0.67
HMGA2-211ENST00000545998 LINC00303Q3SY05 128 aa19.21■□□□□ 0.67
HMGA2-211ENST00000545998 NDUFAF5Q5TEU4 345 aa19.21■□□□□ 0.67
HMGA2-211ENST00000545998 CLNKQ7Z7G1 428 aa19.21■□□□□ 0.67
HMGA2-211ENST00000545998 TANKQ92844 425 aa19.21■□□□□ 0.67
HMGA2-211ENST00000545998 ANKRD9Q96BM1 317 aaPredicted RBP19.21■□□□□ 0.67
HMGA2-211ENST00000545998 EBPLQ9BY08 206 aa19.21■□□□□ 0.67
HMGA2-211ENST00000545998 TRIM55Q9BYV6 548 aa19.21■□□□□ 0.67
HMGA2-211ENST00000545998 ATRXP46100 2492 aa19.21■□□□□ 0.67
HMGA2-211ENST00000545998 IGHV3-20A0A0C4DH32 117 aa19.2■□□□□ 0.66
HMGA2-211ENST00000545998 LDB3O75112 727 aa19.2■□□□□ 0.66
HMGA2-211ENST00000545998 GUCY1B2O75343 617 aa19.2■□□□□ 0.66
HMGA2-211ENST00000545998 OR4D2P58180 307 aa19.2■□□□□ 0.66
HMGA2-211ENST00000545998 PDCD2Q16342 344 aaPredicted RBP19.2■□□□□ 0.66
HMGA2-211ENST00000545998 SFT2D3Q587I9 215 aa19.2■□□□□ 0.66
HMGA2-211ENST00000545998 DYDC1Q8WWB3 177 aa19.2■□□□□ 0.66
HMGA2-211ENST00000545998 UCN3Q969E3 161 aa19.2■□□□□ 0.66
HMGA2-211ENST00000545998 C19orf60Q96EN9 201 aa19.2■□□□□ 0.66
HMGA2-211ENST00000545998 FCRL1Q96LA6 429 aa19.2■□□□□ 0.66
HMGA2-211ENST00000545998 ZNF160Q9HCG1 818 aa19.2■□□□□ 0.66
HMGA2-211ENST00000545998 LHX6Q9UPM6 363 aa19.2■□□□□ 0.66
HMGA2-211ENST00000545998 KALRNO60229 2985 aa19.2■□□□□ 0.66
HMGA2-211ENST00000545998 TLN1Q9Y490 2541 aaKnown RBP19.2■□□□□ 0.66
HMGA2-211ENST00000545998 NSG1A0A0A6YYJ2 146 aa19.19■□□□□ 0.66
HMGA2-211ENST00000545998 GNG14A0A1W2PPG7 69 aa19.19■□□□□ 0.66
HMGA2-211ENST00000545998 GLOD5A6NK44 160 aa19.19■□□□□ 0.66
HMGA2-211ENST00000545998 WASHC1A8K0Z3 465 aa19.19■□□□□ 0.66
HMGA2-211ENST00000545998 PGRMC2O15173 223 aa19.19■□□□□ 0.66
HMGA2-211ENST00000545998 FGF17O60258 216 aa19.19■□□□□ 0.66
HMGA2-211ENST00000545998 ANXA4P09525 319 aaPredicted RBP19.19■□□□□ 0.66
HMGA2-211ENST00000545998 TAS2R50P59544 299 aa19.19■□□□□ 0.66
HMGA2-211ENST00000545998 NOXRED1Q6NXP6 359 aa19.19■□□□□ 0.66
HMGA2-211ENST00000545998 CLEC1AQ8NC01 280 aa19.19■□□□□ 0.66
HMGA2-211ENST00000545998 DNAJB14Q8TBM8 379 aa19.19■□□□□ 0.66
HMGA2-211ENST00000545998 LRRC8CQ8TDW0 803 aa19.19■□□□□ 0.66
HMGA2-211ENST00000545998 C16orf78Q8WTQ4 265 aa19.19■□□□□ 0.66
HMGA2-211ENST00000545998 IMMP1LQ96LU5 166 aa19.19■□□□□ 0.66
HMGA2-211ENST00000545998 WDR41Q9HAD4 459 aa19.19■□□□□ 0.66
HMGA2-211ENST00000545998 PFDN4Q9NQP4 134 aa19.19■□□□□ 0.66
HMGA2-211ENST00000545998 RIC8BQ9NVN3 520 aa19.19■□□□□ 0.66
HMGA2-211ENST00000545998 POLR3HQ9Y535 204 aaPredicted RBP19.19■□□□□ 0.66
HMGA2-211ENST00000545998 ATP6AP2A0A1C7CYW4 349 aa19.19■□□□□ 0.66
HMGA2-211ENST00000545998 SYNDIG1LA6NDD5 238 aa19.19■□□□□ 0.66
HMGA2-211ENST00000545998 ATP6AP2O75787 350 aa19.19■□□□□ 0.66
HMGA2-211ENST00000545998 DNAJB5O75953 348 aa19.19■□□□□ 0.66
HMGA2-211ENST00000545998 SEC24DO94855 1032 aaPredicted RBP19.19■□□□□ 0.66
HMGA2-211ENST00000545998 POLE2P56282 527 aa19.19■□□□□ 0.66
HMGA2-211ENST00000545998 IGLV3-21P80748 117 aaPredicted RBP19.19■□□□□ 0.66
HMGA2-211ENST00000545998 FOLH1Q04609 750 aa19.19■□□□□ 0.66
HMGA2-211ENST00000545998 ZNF763Q0D2J5 394 aa19.19■□□□□ 0.66
HMGA2-211ENST00000545998 STX4Q12846 297 aa19.19■□□□□ 0.66
HMGA2-211ENST00000545998 AIMP2Q13155 320 aaKnown RBP19.19■□□□□ 0.66
HMGA2-211ENST00000545998 GALNTL6Q49A17 601 aa19.19■□□□□ 0.66
HMGA2-211ENST00000545998 RFTN2Q52LD8 501 aaPredicted RBP19.19■□□□□ 0.66
HMGA2-211ENST00000545998 MMP21Q8N119 569 aa19.19■□□□□ 0.66
HMGA2-211ENST00000545998 CKAP2Q8WWK9 683 aa19.19■□□□□ 0.66
HMGA2-211ENST00000545998 PPP3R2Q96LZ3 170 aa19.19■□□□□ 0.66
HMGA2-211ENST00000545998 TUBB6Q9BUF5 446 aa19.19■□□□□ 0.66
HMGA2-211ENST00000545998 ATP13A2Q9NQ11 1180 aa19.19■□□□□ 0.66
HMGA2-211ENST00000545998 GIMAP2Q9UG22 337 aa19.19■□□□□ 0.66
HMGA2-211ENST00000545998 TMED5Q9Y3A6 229 aa19.19■□□□□ 0.66
HMGA2-211ENST00000545998 PCDHA9Q9Y5H5 950 aa19.19■□□□□ 0.66
HMGA2-211ENST00000545998 ERVH48-1M5A8F1 160 aa19.18■□□□□ 0.66
HMGA2-211ENST00000545998 MYO1DO94832 1006 aa19.18■□□□□ 0.66
HMGA2-211ENST00000545998 IL3P08700 152 aa19.18■□□□□ 0.66
HMGA2-211ENST00000545998 PPP2R1BP30154 601 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms