RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 BARD1Q99728 777 aaKnown RBP12.01□□□□□ -0.49
COL4A6-209ENST00000545689 CHIAQ9BZP6 476 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 PCDHB16Q9NRJ7 776 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 KLHL21Q9UJP4 597 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 NME4O00746 187 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 CH25HO95992 272 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 MT-ND2P03891 347 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 RPS17P08708 135 aaKnown RBP12.01□□□□□ -0.49
COL4A6-209ENST00000545689 SLC10A3P09131 477 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 C8orf89P0DMQ9 161 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 OR1E2P47887 323 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 RAB6CQ53S08 254 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.01□□□□□ -0.49
COL4A6-209ENST00000545689 CHERPQ8IWX8 916 aaKnown RBP12.01□□□□□ -0.49
COL4A6-209ENST00000545689 HS3ST5Q8IZT8 346 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 METTL25Q8N6Q8 603 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 KCT2Q8NC54 265 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 POF1BQ8WVV4 589 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 RAB8BQ92930 207 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 NKD1Q969G9 470 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 RAB6CQ9H0N0 254 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 ZNF208O43345 1280 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 PDX1P52945 283 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 KEAP1Q14145 624 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 LRRC25Q8N386 305 aaPredicted RBP12.01□□□□□ -0.49
COL4A6-209ENST00000545689 TMIEQ8NEW7 156 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 FNDC8Q8TC99 324 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 RFT1Q96AA3 541 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 SCRN2Q96FV2 425 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 JSRP1Q96MG2 331 aaPredicted RBP12.01□□□□□ -0.49
COL4A6-209ENST00000545689 WDR92Q96MX6 357 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 TM9SF2Q99805 663 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 SFXN1Q9H9B4 322 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 MAGED1Q9Y5V3 778 aaPredicted RBP12.01□□□□□ -0.49
COL4A6-209ENST00000545689 IFNA21P01568 189 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 IQCF3P0C7M6 154 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 CYBAP13498 195 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 ERVPABLB-1P60509 514 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 ACTA2P62736 377 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 ACTG2P63267 376 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 TAZQ16635 292 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 SCAMP4Q969E2 229 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 ZNF778Q96MU6 729 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 PREBQ9HCU5 417 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 TREX1Q9NSU2 369 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 LAMP5Q9UJQ1 280 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 GABRQQ9UN88 632 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 PRKAB1Q9Y478 270 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 PTGDR2Q9Y5Y4 395 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 A0A0G2JPF8 293 aa12□□□□□ -0.49
COL4A6-209ENST00000545689 C5orf51A6NDU8 294 aa12□□□□□ -0.49
COL4A6-209ENST00000545689 HNRNPCL3B7ZW38 293 aa12□□□□□ -0.49
COL4A6-209ENST00000545689 APBB3O95704 486 aa12□□□□□ -0.49
COL4A6-209ENST00000545689 HNRNPCL4P0DMR1 293 aa12□□□□□ -0.49
COL4A6-209ENST00000545689 FLYWCH1Q4VC44 716 aa12□□□□□ -0.49
COL4A6-209ENST00000545689 OR4C11Q6IEV9 310 aa12□□□□□ -0.49
COL4A6-209ENST00000545689 SLC44A3Q8N4M1 653 aa12□□□□□ -0.49
COL4A6-209ENST00000545689 OR4C15Q8NGM1 316 aa12□□□□□ -0.49
COL4A6-209ENST00000545689 FUZQ9BT04 418 aa12□□□□□ -0.49
COL4A6-209ENST00000545689 HYKKA2RU49 373 aa12□□□□□ -0.49
COL4A6-209ENST00000545689 C2orf78A6NCI8 922 aa12□□□□□ -0.49
COL4A6-209ENST00000545689 ASGR2P07307 311 aa12□□□□□ -0.49
COL4A6-209ENST00000545689 T-ENOLP0DO92 83 aa12□□□□□ -0.49
COL4A6-209ENST00000545689 MAP2K4P45985 399 aa12□□□□□ -0.49
COL4A6-209ENST00000545689 RPS3AP61247 264 aaKnown RBP12□□□□□ -0.49
COL4A6-209ENST00000545689 LAPTM4AQ15012 233 aa12□□□□□ -0.49
COL4A6-209ENST00000545689 ARHGAP40Q5TG30 622 aa12□□□□□ -0.49
COL4A6-209ENST00000545689 LRRN1Q6UXK5 716 aa12□□□□□ -0.49
COL4A6-209ENST00000545689 OR52B6Q8NGF0 335 aa12□□□□□ -0.49
COL4A6-209ENST00000545689 PHOSPHO1Q8TCT1 267 aa12□□□□□ -0.49
COL4A6-209ENST00000545689 PITHD1Q9GZP4 211 aaPredicted RBP12□□□□□ -0.49
COL4A6-209ENST00000545689 MAU2Q9Y6X3 613 aa12□□□□□ -0.49
COL4A6-209ENST00000545689 SLC22A31A6NKX4 558 aa12□□□□□ -0.49
COL4A6-209ENST00000545689 STK19P49842 368 aaPredicted RBP12□□□□□ -0.49
COL4A6-209ENST00000545689 MC1RQ01726 317 aa12□□□□□ -0.49
COL4A6-209ENST00000545689 ARFRP1Q13795 201 aa12□□□□□ -0.49
COL4A6-209ENST00000545689 RAB41Q5JT25 222 aa12□□□□□ -0.49
COL4A6-209ENST00000545689 KIAA0319Q5VV43 1072 aa12□□□□□ -0.49
COL4A6-209ENST00000545689 C6orf120Q7Z4R8 191 aa12□□□□□ -0.49
COL4A6-209ENST00000545689 SIX5Q8N196 739 aa12□□□□□ -0.49
COL4A6-209ENST00000545689 ARFGAP1Q8N6T3 406 aa12□□□□□ -0.49
COL4A6-209ENST00000545689 HUS1BQ8NHY5 278 aa12□□□□□ -0.49
COL4A6-209ENST00000545689 AKAP1Q92667 903 aaKnown RBP eCLIP12□□□□□ -0.49
COL4A6-209ENST00000545689 LGALS12Q96DT0 336 aa12□□□□□ -0.49
COL4A6-209ENST00000545689 ORAI3Q9BRQ5 295 aa12□□□□□ -0.49
COL4A6-209ENST00000545689 ARNT2Q9HBZ2 717 aa12□□□□□ -0.49
COL4A6-209ENST00000545689 HCN2Q9UL51 889 aa12□□□□□ -0.49
COL4A6-209ENST00000545689 ARNTLO00327 626 aa12□□□□□ -0.49
COL4A6-209ENST00000545689 HLA-EP13747 358 aa12□□□□□ -0.49
COL4A6-209ENST00000545689 LRIF1Q5T3J3 769 aa12□□□□□ -0.49
COL4A6-209ENST00000545689 DENND6BQ8NEG7 585 aa12□□□□□ -0.49
COL4A6-209ENST00000545689 CD200R1Q8TD46 325 aa12□□□□□ -0.49
COL4A6-209ENST00000545689 ZNF431Q8TF32 576 aaPredicted RBP12□□□□□ -0.49
COL4A6-209ENST00000545689 ACTR6Q9GZN1 396 aa12□□□□□ -0.49
COL4A6-209ENST00000545689 SMG9Q9H0W8 520 aaKnown RBP12□□□□□ -0.49
COL4A6-209ENST00000545689 KCNK13Q9HB14 408 aa12□□□□□ -0.49
COL4A6-209ENST00000545689 SERTAD3Q9UJW9 196 aa12□□□□□ -0.49
COL4A6-209ENST00000545689 WASHC1A8K0Z3 465 aa12□□□□□ -0.49
COL4A6-209ENST00000545689 WASH3PC4AMC7 463 aa12□□□□□ -0.49
COL4A6-209ENST00000545689 CSNK1DP48730 415 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms