RNA–Protein interactions for RNA: ENST00000545015.1

POLE-222, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 2

Gene POLE, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-222	ENST00000545015	SAP18	O00422	153 aa	Known RBP	12.48	□□□□□ -0.41
POLE-222	ENST00000545015	PROM1	O43490	865 aa		12.48	□□□□□ -0.41
POLE-222	ENST00000545015	NME2P1	O60361	137 aa		12.48	□□□□□ -0.41
POLE-222	ENST00000545015	SLC25A12	O75746	678 aa		12.48	□□□□□ -0.41
POLE-222	ENST00000545015	ETHE1	O95571	254 aa		12.48	□□□□□ -0.41
POLE-222	ENST00000545015	NME2	P22392	152 aa		12.48	□□□□□ -0.41
POLE-222	ENST00000545015	MST1	P26927	711 aa		12.48	□□□□□ -0.41
POLE-222	ENST00000545015	TNFRSF8	P28908	595 aa		12.48	□□□□□ -0.41
POLE-222	ENST00000545015	CCNG1	P51959	295 aa		12.48	□□□□□ -0.41
POLE-222	ENST00000545015	RAP1GDS1	P52306	607 aa		12.48	□□□□□ -0.41
POLE-222	ENST00000545015	TNFRSF17	Q02223	184 aa		12.48	□□□□□ -0.41
POLE-222	ENST00000545015	OC90	Q02509	493 aa	Predicted RBP	12.48	□□□□□ -0.41
POLE-222	ENST00000545015	STX4	Q12846	297 aa		12.48	□□□□□ -0.41
POLE-222	ENST00000545015	DDX39B	Q13838	428 aa	Known RBP	12.48	□□□□□ -0.41
POLE-222	ENST00000545015	FRG2	Q64ET8	278 aa		12.48	□□□□□ -0.41
POLE-222	ENST00000545015	CLNK	Q7Z7G1	428 aa		12.48	□□□□□ -0.41
POLE-222	ENST00000545015	MYLK4	Q86YV6	388 aa	Predicted RBP	12.48	□□□□□ -0.41
POLE-222	ENST00000545015	GPALPP1	Q8IXQ4	340 aa		12.48	□□□□□ -0.41
POLE-222	ENST00000545015	THAP3	Q8WTV1	239 aa	Predicted RBP	12.48	□□□□□ -0.41
POLE-222	ENST00000545015	MZB1	Q8WU39	189 aa		12.48	□□□□□ -0.41
POLE-222	ENST00000545015	RELT	Q969Z4	430 aa		12.48	□□□□□ -0.41
POLE-222	ENST00000545015	FRMD6	Q96NE9	622 aa		12.48	□□□□□ -0.41
POLE-222	ENST00000545015	NSUN5	Q96P11	429 aa	Known RBP	12.48	□□□□□ -0.41
POLE-222	ENST00000545015	FRG2B	Q96QU4	278 aa		12.48	□□□□□ -0.41
POLE-222	ENST00000545015	CCDC77	Q9BR77	488 aa		12.48	□□□□□ -0.41
POLE-222	ENST00000545015	RPF2	Q9H7B2	306 aa	Known RBP	12.48	□□□□□ -0.41
POLE-222	ENST00000545015	ANKRD10	Q9NXR5	420 aa		12.48	□□□□□ -0.41
POLE-222	ENST00000545015	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	12.48	□□□□□ -0.41
POLE-222	ENST00000545015	FBXW2	Q9UKT8	454 aa		12.48	□□□□□ -0.41
POLE-222	ENST00000545015	YARS2	Q9Y2Z4	477 aa	Known RBP	12.48	□□□□□ -0.41
POLE-222	ENST00000545015	ATG4B	Q9Y4P1	393 aa		12.48	□□□□□ -0.41
POLE-222	ENST00000545015	ASB4	Q9Y574	426 aa		12.48	□□□□□ -0.41
POLE-222	ENST00000545015	CLCA3P	Q9Y6N3	262 aa		12.48	□□□□□ -0.41
POLE-222	ENST00000545015	SPTBN1	Q01082	2364 aa	Known RBP	12.48	□□□□□ -0.41
POLE-222	ENST00000545015		A0A1B0GUH1	482 aa		12.47	□□□□□ -0.41
POLE-222	ENST00000545015	TMPRSS11D	O60235	418 aa		12.47	□□□□□ -0.41
POLE-222	ENST00000545015	FGF17	O60258	216 aa		12.47	□□□□□ -0.41
POLE-222	ENST00000545015	LDB3	O75112	727 aa		12.47	□□□□□ -0.41
POLE-222	ENST00000545015	EED	O75530	441 aa	Known RBP	12.47	□□□□□ -0.41
POLE-222	ENST00000545015	OTC	P00480	354 aa		12.47	□□□□□ -0.41
POLE-222	ENST00000545015	GSTA1	P08263	222 aa		12.47	□□□□□ -0.41
POLE-222	ENST00000545015	TLX1	P31314	330 aa	Predicted RBP	12.47	□□□□□ -0.41
POLE-222	ENST00000545015	GALNS	P34059	522 aa		12.47	□□□□□ -0.41
POLE-222	ENST00000545015	BUD31	P41223	144 aa	Predicted RBP	12.47	□□□□□ -0.41
POLE-222	ENST00000545015	STT3A	P46977	705 aa		12.47	□□□□□ -0.41
POLE-222	ENST00000545015	HNRNPH2	P55795	449 aa	Known RBP	12.47	□□□□□ -0.41
POLE-222	ENST00000545015	RASA2	Q15283	850 aa		12.47	□□□□□ -0.41
POLE-222	ENST00000545015	KRTCAP3	Q53RY4	240 aa		12.47	□□□□□ -0.41
POLE-222	ENST00000545015	HSDL2	Q6YN16	418 aa		12.47	□□□□□ -0.41
POLE-222	ENST00000545015	GALNTL5	Q7Z4T8	443 aa		12.47	□□□□□ -0.41
POLE-222	ENST00000545015	NUDT13	Q86X67	352 aa		12.47	□□□□□ -0.41
POLE-222	ENST00000545015	SIAH3	Q8IW03	269 aa		12.47	□□□□□ -0.41
POLE-222	ENST00000545015	FAM98A	Q8NCA5	519 aa	Known RBP	12.47	□□□□□ -0.41
POLE-222	ENST00000545015	LRRN4CL	Q8ND94	238 aa		12.47	□□□□□ -0.41
POLE-222	ENST00000545015	ATP6V1E2	Q96A05	226 aa		12.47	□□□□□ -0.41
POLE-222	ENST00000545015	CDK15	Q96Q40	435 aa		12.47	□□□□□ -0.41
POLE-222	ENST00000545015	PELO	Q9BRX2	385 aa	Known RBP	12.47	□□□□□ -0.41
POLE-222	ENST00000545015	SORBS1	Q9BX66	1292 aa	Known RBP	12.47	□□□□□ -0.41
POLE-222	ENST00000545015	HES7	Q9BYE0	225 aa		12.47	□□□□□ -0.41
POLE-222	ENST00000545015	PPCS	Q9HAB8	311 aa		12.47	□□□□□ -0.41
POLE-222	ENST00000545015	TMEM216	Q9P0N5	145 aa		12.47	□□□□□ -0.41
POLE-222	ENST00000545015	MYOT	Q9UBF9	498 aa		12.47	□□□□□ -0.41
POLE-222	ENST00000545015	PLEKHB1	Q9UF11	243 aa	Predicted RBP	12.47	□□□□□ -0.41
POLE-222	ENST00000545015	ADAM29	Q9UKF5	820 aa		12.47	□□□□□ -0.41
POLE-222	ENST00000545015	OSGIN2	Q9Y236	505 aa		12.47	□□□□□ -0.41
POLE-222	ENST00000545015	C17orf105	B2RV13	164 aa		12.46	□□□□□ -0.41
POLE-222	ENST00000545015	PRKN	O60260	465 aa	Predicted RBP	12.46	□□□□□ -0.41
POLE-222	ENST00000545015	SH3BGRL	O75368	114 aa		12.46	□□□□□ -0.41
POLE-222	ENST00000545015	ITGA10	O75578	1167 aa		12.46	□□□□□ -0.41
POLE-222	ENST00000545015	MLYCD	O95822	493 aa		12.46	□□□□□ -0.41
POLE-222	ENST00000545015	IGKV3-11	P04433	115 aa		12.46	□□□□□ -0.41
POLE-222	ENST00000545015	IFNA16	P05015	189 aa		12.46	□□□□□ -0.41
POLE-222	ENST00000545015	FAM58BP	P0C7Q3	252 aa		12.46	□□□□□ -0.41
POLE-222	ENST00000545015	NEK2	P51955	445 aa		12.46	□□□□□ -0.41
POLE-222	ENST00000545015	PER3	P56645	1201 aa		12.46	□□□□□ -0.41
POLE-222	ENST00000545015	HERVK_113	P63132	956 aa		12.46	□□□□□ -0.41
POLE-222	ENST00000545015	PMP22	Q01453	160 aa		12.46	□□□□□ -0.41
POLE-222	ENST00000545015	GFRAL	Q6UXV0	394 aa		12.46	□□□□□ -0.41
POLE-222	ENST00000545015	MILR1	Q7Z6M3	343 aa		12.46	□□□□□ -0.41
POLE-222	ENST00000545015	TDRP	Q86YL5	185 aa		12.46	□□□□□ -0.41
POLE-222	ENST00000545015	ST13P4	Q8IZP2	240 aa	Predicted RBP	12.46	□□□□□ -0.41
POLE-222	ENST00000545015	POGLUT1	Q8NBL1	392 aa		12.46	□□□□□ -0.41
POLE-222	ENST00000545015	OR4F6	Q8NGB9	312 aa		12.46	□□□□□ -0.41
POLE-222	ENST00000545015	SLC2A12	Q8TD20	617 aa		12.46	□□□□□ -0.41
POLE-222	ENST00000545015	ZNF721	Q8TF20	911 aa		12.46	□□□□□ -0.41
POLE-222	ENST00000545015	TMEM125	Q96AQ2	219 aa		12.46	□□□□□ -0.41
POLE-222	ENST00000545015	GPR137	Q96N19	417 aa		12.46	□□□□□ -0.41
POLE-222	ENST00000545015	ERVK-6	Q9BXR3	956 aa		12.46	□□□□□ -0.41
POLE-222	ENST00000545015	BRF2	Q9HAW0	419 aa		12.46	□□□□□ -0.41
POLE-222	ENST00000545015	KLHL1	Q9NR64	748 aa		12.46	□□□□□ -0.41
POLE-222	ENST00000545015	SEC14L3	Q9UDX4	400 aa		12.46	□□□□□ -0.41
POLE-222	ENST00000545015	TRPS1	Q9UHF7	1281 aa		12.46	□□□□□ -0.41
POLE-222	ENST00000545015	ZNF225	Q9UK10	706 aa		12.46	□□□□□ -0.41
POLE-222	ENST00000545015	KLF13	Q9Y2Y9	288 aa	Predicted RBP	12.46	□□□□□ -0.41
POLE-222	ENST00000545015	ICE1	Q9Y2F5	2266 aa		12.46	□□□□□ -0.42
POLE-222	ENST00000545015		A0A1B0GTL3	188 aa		12.45	□□□□□ -0.42
POLE-222	ENST00000545015		A0A1W2PR48	441 aa		12.45	□□□□□ -0.42
POLE-222	ENST00000545015	CYSRT1	A8MQ03	144 aa		12.45	□□□□□ -0.42
POLE-222	ENST00000545015	LRRTM2	O43300	516 aa		12.45	□□□□□ -0.42
POLE-222	ENST00000545015	GPR75	O95800	540 aa		12.45	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms