RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 ATG4BQ9Y4P1 393 aa14.69□□□□□ -0.06
CCDC78-216ENST00000544996 V9GYY5 206 aaPredicted RBP14.69□□□□□ -0.06
CCDC78-216ENST00000544996 A0A0A6YYD5 115 aa14.68□□□□□ -0.06
CCDC78-216ENST00000544996 TRBV11-1A0A0K0K1C0 115 aa14.68□□□□□ -0.06
CCDC78-216ENST00000544996 CCDC151A5D8V7 595 aa14.68□□□□□ -0.06
CCDC78-216ENST00000544996 GABRR3A8MPY1 467 aa14.68□□□□□ -0.06
CCDC78-216ENST00000544996 FOXO6A8MYZ6 492 aa14.68□□□□□ -0.06
CCDC78-216ENST00000544996 FCHO1O14526 889 aa14.68□□□□□ -0.06
CCDC78-216ENST00000544996 PROM1O43490 865 aa14.68□□□□□ -0.06
CCDC78-216ENST00000544996 DYRK3O43781 588 aa14.68□□□□□ -0.06
CCDC78-216ENST00000544996 PRAMEF2O60811 474 aa14.68□□□□□ -0.06
CCDC78-216ENST00000544996 EEDO75530 441 aaKnown RBP14.68□□□□□ -0.06
CCDC78-216ENST00000544996 OR4F21O95013 312 aa14.68□□□□□ -0.06
CCDC78-216ENST00000544996 COX7A2P14406 83 aa14.68□□□□□ -0.06
CCDC78-216ENST00000544996 GNLYP22749 145 aa14.68□□□□□ -0.06
CCDC78-216ENST00000544996 LCP2Q13094 533 aa14.68□□□□□ -0.06
CCDC78-216ENST00000544996 TUBA3CQ13748 450 aa14.68□□□□□ -0.06
CCDC78-216ENST00000544996 ELOAQ14241 798 aaKnown RBP14.68□□□□□ -0.06
CCDC78-216ENST00000544996 TUBA3EQ6PEY2 450 aa14.68□□□□□ -0.06
CCDC78-216ENST00000544996 GPRIN3Q6ZVF9 776 aa14.68□□□□□ -0.06
CCDC78-216ENST00000544996 CCNYL1Q8N7R7 359 aa14.68□□□□□ -0.06
CCDC78-216ENST00000544996 CDYL2Q8N8U2 506 aa14.68□□□□□ -0.06
CCDC78-216ENST00000544996 CCDC63Q8NA47 563 aa14.68□□□□□ -0.06
CCDC78-216ENST00000544996 APCDD1LQ8NCL9 501 aa14.68□□□□□ -0.06
CCDC78-216ENST00000544996 MORN4Q8NDC4 146 aa14.68□□□□□ -0.06
CCDC78-216ENST00000544996 OR2W6PQ8NHA6 318 aa14.68□□□□□ -0.06
CCDC78-216ENST00000544996 RDH11Q8TC12 318 aa14.68□□□□□ -0.06
CCDC78-216ENST00000544996 GRHL3Q8TE85 626 aa14.68□□□□□ -0.06
CCDC78-216ENST00000544996 NCLNQ969V3 563 aa14.68□□□□□ -0.06
CCDC78-216ENST00000544996 RBM18Q96H35 190 aaKnown RBP14.68□□□□□ -0.06
CCDC78-216ENST00000544996 BARD1Q99728 777 aaKnown RBP14.68□□□□□ -0.06
CCDC78-216ENST00000544996 NPAS2Q99743 824 aa14.68□□□□□ -0.06
CCDC78-216ENST00000544996 ZNF717Q9BY31 904 aaPredicted RBP14.68□□□□□ -0.06
CCDC78-216ENST00000544996 BRF2Q9HAW0 419 aa14.68□□□□□ -0.06
CCDC78-216ENST00000544996 ADAM29Q9UKF5 820 aa14.68□□□□□ -0.06
CCDC78-216ENST00000544996 EMCNQ9ULC0 261 aa14.68□□□□□ -0.06
CCDC78-216ENST00000544996 SLC12A4Q9UP95 1085 aa14.68□□□□□ -0.06
CCDC78-216ENST00000544996 DOCK10Q96BY6 2186 aa14.68□□□□□ -0.06
CCDC78-216ENST00000544996 A0A1B0GTL3 188 aa14.67□□□□□ -0.06
CCDC78-216ENST00000544996 MYOCOSA0A1B0GUC4 107 aa14.67□□□□□ -0.06
CCDC78-216ENST00000544996 C17orf105B2RV13 164 aa14.67□□□□□ -0.06
CCDC78-216ENST00000544996 G3V2L1 256 aa14.67□□□□□ -0.06
CCDC78-216ENST00000544996 TMPRSS11DO60235 418 aa14.67□□□□□ -0.06
CCDC78-216ENST00000544996 MAN1A2O60476 641 aa14.67□□□□□ -0.06
CCDC78-216ENST00000544996 PLIN3O60664 434 aa14.67□□□□□ -0.06
CCDC78-216ENST00000544996 ULK1O75385 1050 aa14.67□□□□□ -0.06
CCDC78-216ENST00000544996 ZFAND5O76080 213 aa14.67□□□□□ -0.06
CCDC78-216ENST00000544996 PDYNP01213 254 aa14.67□□□□□ -0.06
CCDC78-216ENST00000544996 PROCP04070 461 aa14.67□□□□□ -0.06
CCDC78-216ENST00000544996 NR2F6P10588 404 aa14.67□□□□□ -0.06
CCDC78-216ENST00000544996 CD46P15529 392 aa14.67□□□□□ -0.06
CCDC78-216ENST00000544996 HMOX2P30519 316 aa14.67□□□□□ -0.06
CCDC78-216ENST00000544996 CD96P40200 585 aa14.67□□□□□ -0.06
CCDC78-216ENST00000544996 UQCRFS1P47985 274 aa14.67□□□□□ -0.06
CCDC78-216ENST00000544996 CYB561P49447 251 aa14.67□□□□□ -0.06
CCDC78-216ENST00000544996 PKNOX1P55347 436 aa14.67□□□□□ -0.06
CCDC78-216ENST00000544996 HNRNPH2P55795 449 aaKnown RBP14.67□□□□□ -0.06
CCDC78-216ENST00000544996 MLF1P58340 268 aa14.67□□□□□ -0.06
CCDC78-216ENST00000544996 ID2Q02363 134 aa14.67□□□□□ -0.06
CCDC78-216ENST00000544996 NR6A1Q15406 480 aa14.67□□□□□ -0.06
CCDC78-216ENST00000544996 OR1C1Q15619 314 aa14.67□□□□□ -0.06
CCDC78-216ENST00000544996 ERCC6LQ2NKX8 1250 aa14.67□□□□□ -0.06
CCDC78-216ENST00000544996 ZNF766Q5HY98 468 aa14.67□□□□□ -0.06
CCDC78-216ENST00000544996 C18orf63Q68DL7 685 aa14.67□□□□□ -0.06
CCDC78-216ENST00000544996 MRM1Q6IN84 353 aaKnown RBP14.67□□□□□ -0.06
CCDC78-216ENST00000544996 OR4N5Q8IXE1 308 aa14.67□□□□□ -0.06
CCDC78-216ENST00000544996 BCORP1Q8N888 145 aa14.67□□□□□ -0.06
CCDC78-216ENST00000544996 METTL6Q8TCB7 284 aa14.67□□□□□ -0.06
CCDC78-216ENST00000544996 FAR1Q8WVX9 515 aa14.67□□□□□ -0.06
CCDC78-216ENST00000544996 CAVIN3Q969G5 261 aa14.67□□□□□ -0.06
CCDC78-216ENST00000544996 ANKRD9Q96BM1 317 aaPredicted RBP14.67□□□□□ -0.06
CCDC78-216ENST00000544996 DGAT2Q96PD7 388 aa14.67□□□□□ -0.06
CCDC78-216ENST00000544996 MRPL1Q9BYD6 325 aaKnown RBP14.67□□□□□ -0.06
CCDC78-216ENST00000544996 ROPN1BQ9BZX4 212 aaPredicted RBP14.67□□□□□ -0.06
CCDC78-216ENST00000544996 IQCGQ9H095 443 aaKnown RBP14.67□□□□□ -0.06
CCDC78-216ENST00000544996 ROPN1Q9HAT0 212 aaPredicted RBP14.67□□□□□ -0.06
CCDC78-216ENST00000544996 FARSBQ9NSD9 589 aaKnown RBP14.67□□□□□ -0.06
CCDC78-216ENST00000544996 ANKRD10Q9NXR5 420 aa14.67□□□□□ -0.06
CCDC78-216ENST00000544996 ZNF225Q9UK10 706 aa14.67□□□□□ -0.06
CCDC78-216ENST00000544996 NTNG1Q9Y2I2 539 aa14.67□□□□□ -0.06
CCDC78-216ENST00000544996 ASB4Q9Y574 426 aa14.67□□□□□ -0.06
CCDC78-216ENST00000544996 A0A1W2PR48 441 aa14.66□□□□□ -0.06
CCDC78-216ENST00000544996 ANKUB1A6NFN9 424 aa14.66□□□□□ -0.06
CCDC78-216ENST00000544996 MANBAO00462 879 aa14.66□□□□□ -0.06
CCDC78-216ENST00000544996 FGF17O60258 216 aa14.66□□□□□ -0.06
CCDC78-216ENST00000544996 GUCY1B2O75343 617 aa14.66□□□□□ -0.06
CCDC78-216ENST00000544996 RASAL1O95294 804 aa14.66□□□□□ -0.06
CCDC78-216ENST00000544996 CBX6O95503 412 aa14.66□□□□□ -0.06
CCDC78-216ENST00000544996 CRYABP02511 175 aaKnown RBP14.66□□□□□ -0.06
CCDC78-216ENST00000544996 GBAP04062 536 aa14.66□□□□□ -0.06
CCDC78-216ENST00000544996 ENO1P06733 434 aaKnown RBP14.66□□□□□ -0.06
CCDC78-216ENST00000544996 KLK1P06870 262 aa14.66□□□□□ -0.06
CCDC78-216ENST00000544996 HSD3B1P14060 373 aa14.66□□□□□ -0.06
CCDC78-216ENST00000544996 CPA3P15088 417 aa14.66□□□□□ -0.06
CCDC78-216ENST00000544996 HSD3B2P26439 372 aa14.66□□□□□ -0.06
CCDC78-216ENST00000544996 TPP2P29144 1249 aaPredicted RBP14.66□□□□□ -0.06
CCDC78-216ENST00000544996 GPR143P51810 404 aa14.66□□□□□ -0.06
CCDC78-216ENST00000544996 PLIN5Q00G26 463 aa14.66□□□□□ -0.06
CCDC78-216ENST00000544996 FOLH1Q04609 750 aa14.66□□□□□ -0.06
CCDC78-216ENST00000544996 SLC18A2Q05940 514 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms