RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 TSSK1BQ9BXA7 367 aa3.78□□□□□ -1.8
SNHG1-220ENST00000544550 MAK16Q9BXY0 300 aaKnown RBP3.78□□□□□ -1.8
SNHG1-220ENST00000544550 DEFB126Q9BYW3 111 aa3.78□□□□□ -1.8
SNHG1-220ENST00000544550 TTTY12Q9BZ98 90 aa3.78□□□□□ -1.8
SNHG1-220ENST00000544550 PLA2G12AQ9BZM1 189 aa3.78□□□□□ -1.8
SNHG1-220ENST00000544550 CXorf56Q9H5V9 222 aa3.78□□□□□ -1.8
SNHG1-220ENST00000544550 LDAHQ9H6V9 325 aa3.78□□□□□ -1.8
SNHG1-220ENST00000544550 EXO5Q9H790 373 aa3.78□□□□□ -1.8
SNHG1-220ENST00000544550 LRTM1Q9HBL6 345 aa3.78□□□□□ -1.8
SNHG1-220ENST00000544550 YAE1D1Q9NRH1 226 aa3.78□□□□□ -1.8
SNHG1-220ENST00000544550 ALKBH4Q9NXW9 302 aa3.78□□□□□ -1.8
SNHG1-220ENST00000544550 MYO1AQ9UBC5 1043 aa3.78□□□□□ -1.8
SNHG1-220ENST00000544550 LCMT1Q9UIC8 334 aa3.78□□□□□ -1.8
SNHG1-220ENST00000544550 RUVBL1Q9Y265 456 aaKnown RBP3.78□□□□□ -1.8
SNHG1-220ENST00000544550 ARL5AQ9Y689 179 aa3.78□□□□□ -1.8
SNHG1-220ENST00000544550 NFS1Q9Y697 457 aa3.78□□□□□ -1.8
SNHG1-220ENST00000544550 PRRC2CQ9Y520 2896 aaKnown RBP3.78□□□□□ -1.8
SNHG1-220ENST00000544550 VPS13CQ709C8 3753 aa3.78□□□□□ -1.8
SNHG1-220ENST00000544550 NSD1Q96L73 2696 aaPredicted RBP3.77□□□□□ -1.81
SNHG1-220ENST00000544550 TRBV5-4A0A0C4DH59 114 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 A0A0G2JK05 382 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 SLC5A10A0PJK1 596 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 C9orf118A6NHY6 69 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 SAGE2PA6NJ88 616 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 FAM166BA8MTA8 275 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 A8MVJ9 347 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 VSTM5A8MXK1 200 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 MAGEB17A8MXT2 336 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 AHRRA9YTQ3 701 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 ZNF487B1APH4 448 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 EEF1E1-BLOC1S5C9J1V9 151 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 MYO1FO00160 1098 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 APOL1O14791 398 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 EPHB6O15197 1021 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 EEF1E1O43324 174 aaKnown RBP3.77□□□□□ -1.81
SNHG1-220ENST00000544550 KCNAB3O43448 404 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 FOXS1O43638 330 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 SOX30O94993 753 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 CCNDBP1O95273 360 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 EPPINO95925 133 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 LTA4HP09960 611 aaKnown RBP3.77□□□□□ -1.81
SNHG1-220ENST00000544550 EZRP15311 586 aaKnown RBP3.77□□□□□ -1.81
SNHG1-220ENST00000544550 JAK1P23458 1154 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 CTSSP25774 331 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 CEACAM8P31997 349 aaPredicted RBP3.77□□□□□ -1.81
SNHG1-220ENST00000544550 PRKCIP41743 596 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 XCR1P46094 333 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 KLK7P49862 253 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 OR4D2P58180 307 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 LINC00310P59036 64 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 XIAPP98170 497 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 RELAQ04206 551 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 MGAT2Q10469 447 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 SLC10A2Q12908 348 aaPredicted RBP3.77□□□□□ -1.81
SNHG1-220ENST00000544550 TNK1Q13470 666 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 GBX1Q14549 363 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 ZNF267Q14586 743 aaPredicted RBP3.77□□□□□ -1.81
SNHG1-220ENST00000544550 ITIH4Q14624 930 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 SLC10A1Q14973 349 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 BRD3Q15059 726 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 NOMO1Q15155 1222 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 SIX1Q15475 284 aaPredicted RBP3.77□□□□□ -1.81
SNHG1-220ENST00000544550 SYT16Q17RD7 645 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 HKDC1Q2TB90 917 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 C19orf54Q5BKX5 351 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 C10orf62Q5T681 223 aaPredicted RBP3.77□□□□□ -1.81
SNHG1-220ENST00000544550 LIPNQ5VXI9 398 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 FBXO42Q6P3S6 717 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 KIAA0408Q6ZU52 694 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 TAS2R42Q7RTR8 314 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 OTOAQ7RTW8 1153 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 CAND1Q86VP6 1230 aaKnown RBP3.77□□□□□ -1.81
SNHG1-220ENST00000544550 SERPINA9Q86WD7 417 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 VSIG1Q86XK7 387 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 PM20D2Q8IYS1 436 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 SLC22A15Q8IZD6 547 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 KLHL36Q8N4N3 616 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 C2orf73Q8N5S3 287 aaPredicted RBP3.77□□□□□ -1.81
SNHG1-220ENST00000544550 PQLC3Q8N755 202 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 PSD4Q8NDX1 1056 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 IPMKQ8NFU5 416 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 OR2M7Q8NG81 312 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 OR51Q1Q8NH59 317 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 SGMS2Q8NHU3 365 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 GSDMBQ8TAX9 411 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 HMGCLL1Q8TB92 370 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 MAGEC3Q8TD91 643 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 SNX33Q8WV41 574 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 TMEM171Q8WVE6 324 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 ASZ1Q8WWH4 475 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 HOXB13Q92826 284 aaPredicted RBP3.77□□□□□ -1.81
SNHG1-220ENST00000544550 RAD51AP1Q96B01 352 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 LRRC45Q96CN5 670 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 LRGUKQ96M69 825 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 OLFM3Q96PB7 478 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 RNF157Q96PX1 679 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 FCRL5Q96RD9 977 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 FAM173AQ9BQD7 235 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 ADI1Q9BV57 179 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 BEX2Q9BXY8 128 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms