RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 CSF2P04141 144 aa12.95□□□□□ -0.34
HCFC2-202ENST00000544223 UMPSP11172 480 aa12.95□□□□□ -0.34
HCFC2-202ENST00000544223 ALDH4A1P30038 563 aa12.95□□□□□ -0.34
HCFC2-202ENST00000544223 CXCL12P48061 93 aa12.95□□□□□ -0.34
HCFC2-202ENST00000544223 HNRNPFP52597 415 aaKnown RBP12.95□□□□□ -0.34
HCFC2-202ENST00000544223 GFERP55789 205 aa12.95□□□□□ -0.34
HCFC2-202ENST00000544223 PCBP4P57723 403 aaKnown RBP12.95□□□□□ -0.34
HCFC2-202ENST00000544223 MYBPC1Q00872 1141 aa12.95□□□□□ -0.34
HCFC2-202ENST00000544223 BLMHQ13867 455 aa12.95□□□□□ -0.34
HCFC2-202ENST00000544223 KIR2DS3Q14952 304 aa12.95□□□□□ -0.34
HCFC2-202ENST00000544223 NHSL2Q5HYW2 709 aa12.95□□□□□ -0.34
HCFC2-202ENST00000544223 TMEM107Q6UX40 140 aa12.95□□□□□ -0.34
HCFC2-202ENST00000544223 CEACAM20Q6UY09 585 aa12.95□□□□□ -0.34
HCFC2-202ENST00000544223 ZDHHC21Q8IVQ6 265 aa12.95□□□□□ -0.34
HCFC2-202ENST00000544223 METTL27Q8N6F8 245 aaPredicted RBP12.95□□□□□ -0.34
HCFC2-202ENST00000544223 DNAJB8Q8NHS0 232 aa12.95□□□□□ -0.34
HCFC2-202ENST00000544223 MAFAQ8NHW3 353 aaPredicted RBP12.95□□□□□ -0.34
HCFC2-202ENST00000544223 SHDQ96IW2 340 aa12.95□□□□□ -0.34
HCFC2-202ENST00000544223 UGT2B28Q9BY64 529 aa12.95□□□□□ -0.34
HCFC2-202ENST00000544223 C1GALT1Q9NS00 363 aa12.95□□□□□ -0.34
HCFC2-202ENST00000544223 ANKMY1Q9P2S6 941 aa12.95□□□□□ -0.34
HCFC2-202ENST00000544223 ZNF451Q9Y4E5 1061 aa12.95□□□□□ -0.34
HCFC2-202ENST00000544223 PRAMEF25A6NGN4 478 aa12.94□□□□□ -0.34
HCFC2-202ENST00000544223 CCNDBP1O95273 360 aa12.94□□□□□ -0.34
HCFC2-202ENST00000544223 PGM3O95394 542 aa12.94□□□□□ -0.34
HCFC2-202ENST00000544223 RETP07949 1114 aa12.94□□□□□ -0.34
HCFC2-202ENST00000544223 GPC1P35052 558 aa12.94□□□□□ -0.34
HCFC2-202ENST00000544223 AHRP35869 848 aa12.94□□□□□ -0.34
HCFC2-202ENST00000544223 POLR2IP36954 125 aaKnown RBP12.94□□□□□ -0.34
HCFC2-202ENST00000544223 RUNX2Q13950 521 aa12.94□□□□□ -0.34
HCFC2-202ENST00000544223 IKBIPQ70UQ0 350 aa12.94□□□□□ -0.34
HCFC2-202ENST00000544223 CEP68Q76N32 757 aa12.94□□□□□ -0.34
HCFC2-202ENST00000544223 TMEM52Q8NDY8 209 aa12.94□□□□□ -0.34
HCFC2-202ENST00000544223 TNIP2Q8NFZ5 429 aa12.94□□□□□ -0.34
HCFC2-202ENST00000544223 GOT1L1Q8NHS2 421 aaPredicted RBP12.94□□□□□ -0.34
HCFC2-202ENST00000544223 C16orf58Q96GQ5 468 aa12.94□□□□□ -0.34
HCFC2-202ENST00000544223 AMDHD1Q96NU7 426 aa12.94□□□□□ -0.34
HCFC2-202ENST00000544223 WFDC6Q9BQY6 131 aa12.94□□□□□ -0.34
HCFC2-202ENST00000544223 POT1Q9NUX5 634 aa12.94□□□□□ -0.34
HCFC2-202ENST00000544223 TECTAO75443 2155 aa12.94□□□□□ -0.34
HCFC2-202ENST00000544223 A0A1B0GVT2 93 aa12.94□□□□□ -0.34
HCFC2-202ENST00000544223 SLC9B1P1A6NJY1 282 aa12.94□□□□□ -0.34
HCFC2-202ENST00000544223 J3KTA2 159 aa12.94□□□□□ -0.34
HCFC2-202ENST00000544223 M0QX08 132 aa12.94□□□□□ -0.34
HCFC2-202ENST00000544223 LDB3O75112 727 aa12.94□□□□□ -0.34
HCFC2-202ENST00000544223 BCHEP06276 602 aa12.94□□□□□ -0.34
HCFC2-202ENST00000544223 FNTBP49356 437 aa12.94□□□□□ -0.34
HCFC2-202ENST00000544223 SCARB2Q14108 478 aa12.94□□□□□ -0.34
HCFC2-202ENST00000544223 CMPK2Q5EBM0 449 aa12.94□□□□□ -0.34
HCFC2-202ENST00000544223 C6orf120Q7Z4R8 191 aa12.94□□□□□ -0.34
HCFC2-202ENST00000544223 GALNT5Q7Z7M9 940 aa12.94□□□□□ -0.34
HCFC2-202ENST00000544223 MFSD2AQ8NA29 543 aa12.94□□□□□ -0.34
HCFC2-202ENST00000544223 OR9A2Q8NGT5 310 aa12.94□□□□□ -0.34
HCFC2-202ENST00000544223 OR52J3Q8NH60 311 aa12.94□□□□□ -0.34
HCFC2-202ENST00000544223 C1orf216Q8TAB5 229 aa12.94□□□□□ -0.34
HCFC2-202ENST00000544223 SUN3Q8TAQ9 357 aa12.94□□□□□ -0.34
HCFC2-202ENST00000544223 KLHL6Q8WZ60 621 aa12.94□□□□□ -0.34
HCFC2-202ENST00000544223 TAMM41Q96BW9 452 aa12.94□□□□□ -0.34
HCFC2-202ENST00000544223 MAP3K3Q99759 626 aa12.94□□□□□ -0.34
HCFC2-202ENST00000544223 VCXQ9H320 206 aa12.94□□□□□ -0.34
HCFC2-202ENST00000544223 SLC35C2Q9NQQ7 365 aa12.94□□□□□ -0.34
HCFC2-202ENST00000544223 EXD2Q9NVH0 621 aa12.94□□□□□ -0.34
HCFC2-202ENST00000544223 PILRAQ9UKJ1 303 aa12.94□□□□□ -0.34
HCFC2-202ENST00000544223 PRAMEF27A3QJZ7 478 aa12.93□□□□□ -0.34
HCFC2-202ENST00000544223 OR5K3A6NET4 321 aa12.93□□□□□ -0.34
HCFC2-202ENST00000544223 C2orf74A8MZ97 194 aa12.93□□□□□ -0.34
HCFC2-202ENST00000544223 PROM1O43490 865 aa12.93□□□□□ -0.34
HCFC2-202ENST00000544223 MITFO75030 526 aaPredicted RBP12.93□□□□□ -0.34
HCFC2-202ENST00000544223 SMNDC1O75940 238 aaKnown RBP eCLIP12.93□□□□□ -0.34
HCFC2-202ENST00000544223 PRSS23O95084 383 aa12.93□□□□□ -0.34
HCFC2-202ENST00000544223 MED26O95402 600 aa12.93□□□□□ -0.34
HCFC2-202ENST00000544223 ATP6V1B1P15313 513 aa12.93□□□□□ -0.34
HCFC2-202ENST00000544223 RNF144AP50876 292 aaPredicted RBP12.93□□□□□ -0.34
HCFC2-202ENST00000544223 RACK1P63244 317 aaKnown RBP12.93□□□□□ -0.34
HCFC2-202ENST00000544223 IL1RL1Q01638 556 aa12.93□□□□□ -0.34
HCFC2-202ENST00000544223 BIRC2Q13490 618 aa12.93□□□□□ -0.34
HCFC2-202ENST00000544223 KCNAB1Q14722 419 aa12.93□□□□□ -0.34
HCFC2-202ENST00000544223 CYBRD1Q53TN4 286 aa12.93□□□□□ -0.34
HCFC2-202ENST00000544223 RNF220Q5VTB9 566 aa12.93□□□□□ -0.34
HCFC2-202ENST00000544223 LPCAT2Q7L5N7 544 aa12.93□□□□□ -0.34
HCFC2-202ENST00000544223 TMEM126BQ8IUX1 230 aa12.93□□□□□ -0.34
HCFC2-202ENST00000544223 TTLQ8NG68 377 aa12.93□□□□□ -0.34
HCFC2-202ENST00000544223 BTBD9Q96Q07 612 aa12.93□□□□□ -0.34
HCFC2-202ENST00000544223 BBS4Q96RK4 519 aa12.93□□□□□ -0.34
HCFC2-202ENST00000544223 BDH2Q9BUT1 245 aa12.93□□□□□ -0.34
HCFC2-202ENST00000544223 NLNQ9BYT8 704 aa12.93□□□□□ -0.34
HCFC2-202ENST00000544223 RAB23Q9ULC3 237 aa12.93□□□□□ -0.34
HCFC2-202ENST00000544223 KCNE3Q9Y6H6 103 aa12.93□□□□□ -0.34
HCFC2-202ENST00000544223 GPR179Q6PRD1 2367 aa12.93□□□□□ -0.34
HCFC2-202ENST00000544223 SGK494L7N484 410 aa12.93□□□□□ -0.34
HCFC2-202ENST00000544223 KDM1AO60341 852 aa12.93□□□□□ -0.34
HCFC2-202ENST00000544223 E2F6O75461 281 aa12.93□□□□□ -0.34
HCFC2-202ENST00000544223 CDC123O75794 336 aaPredicted RBP12.93□□□□□ -0.34
HCFC2-202ENST00000544223 RASAL1O95294 804 aa12.93□□□□□ -0.34
HCFC2-202ENST00000544223 SLC35G6P0C7Q6 338 aa12.93□□□□□ -0.34
HCFC2-202ENST00000544223 OR12D1P0DN82 309 aa12.93□□□□□ -0.34
HCFC2-202ENST00000544223 NME1P15531 152 aaKnown RBP12.93□□□□□ -0.34
HCFC2-202ENST00000544223 CCT3P49368 545 aaKnown RBP12.93□□□□□ -0.34
HCFC2-202ENST00000544223 RPS15AP62244 130 aaKnown RBP12.93□□□□□ -0.34
HCFC2-202ENST00000544223 SYPL1Q16563 259 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms