RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 NXNL1Q96CM4 212 aa18.41■□□□□ 0.54
DDX11-220ENST00000542244 SEC16BQ96JE7 1060 aa18.41■□□□□ 0.54
DDX11-220ENST00000542244 RNF6Q9Y252 685 aa18.41■□□□□ 0.54
DDX11-220ENST00000542244 MRPS33Q9Y291 106 aaKnown RBP18.41■□□□□ 0.54
DDX11-220ENST00000542244 EML6Q6ZMW3 1958 aa18.41■□□□□ 0.54
DDX11-220ENST00000542244 HMX2A2RU54 273 aa18.4■□□□□ 0.54
DDX11-220ENST00000542244 SUPT3HB4E1H0 165 aa18.4■□□□□ 0.54
DDX11-220ENST00000542244 EIF3HO15372 352 aaKnown RBP eCLIP18.4■□□□□ 0.54
DDX11-220ENST00000542244 SUPT3HO75486 399 aa18.4■□□□□ 0.54
DDX11-220ENST00000542244 GLSO94925 669 aaPredicted RBP18.4■□□□□ 0.54
DDX11-220ENST00000542244 CCL3P10147 92 aa18.4■□□□□ 0.54
DDX11-220ENST00000542244 TNNI3P19429 210 aa18.4■□□□□ 0.54
DDX11-220ENST00000542244 HIST1H1TP22492 207 aaPredicted RBP18.4■□□□□ 0.54
DDX11-220ENST00000542244 CASP2P42575 452 aa18.4■□□□□ 0.54
DDX11-220ENST00000542244 DNASE1L1P49184 302 aa18.4■□□□□ 0.54
DDX11-220ENST00000542244 CALCOCO2Q13137 446 aa18.4■□□□□ 0.54
DDX11-220ENST00000542244 SLMAPQ14BN4 828 aa18.4■□□□□ 0.54
DDX11-220ENST00000542244 TBCCQ15814 346 aa18.4■□□□□ 0.54
DDX11-220ENST00000542244 MEX3BQ6ZN04 569 aaKnown RBP18.4■□□□□ 0.54
DDX11-220ENST00000542244 CYS1Q717R9 158 aa18.4■□□□□ 0.54
DDX11-220ENST00000542244 LRRC70Q7Z2Q7 622 aa18.4■□□□□ 0.54
DDX11-220ENST00000542244 CCDC25Q86WR0 208 aa18.4■□□□□ 0.54
DDX11-220ENST00000542244 LAS2Q8IYD9 372 aa18.4■□□□□ 0.54
DDX11-220ENST00000542244 BBOF1Q8ND07 529 aa18.4■□□□□ 0.54
DDX11-220ENST00000542244 MORN4Q8NDC4 146 aa18.4■□□□□ 0.54
DDX11-220ENST00000542244 OR7G3Q8NG95 312 aa18.4■□□□□ 0.54
DDX11-220ENST00000542244 OR5M9Q8NGP3 310 aa18.4■□□□□ 0.54
DDX11-220ENST00000542244 CA5BP1Q8WTZ4 195 aa18.4■□□□□ 0.54
DDX11-220ENST00000542244 CDKL2Q92772 493 aa18.4■□□□□ 0.54
DDX11-220ENST00000542244 KCNC2Q96PR1 638 aa18.4■□□□□ 0.54
DDX11-220ENST00000542244 TREX2Q9BQ50 279 aaPredicted RBP18.4■□□□□ 0.54
DDX11-220ENST00000542244 TTTY12Q9BZ98 90 aa18.4■□□□□ 0.54
DDX11-220ENST00000542244 LYRM4Q9HD34 91 aa18.4■□□□□ 0.54
DDX11-220ENST00000542244 PNPLA3Q9NST1 481 aa18.4■□□□□ 0.54
DDX11-220ENST00000542244 TXNDC16Q9P2K2 825 aa18.4■□□□□ 0.54
DDX11-220ENST00000542244 ZNF407Q9C0G0 2248 aa18.39■□□□□ 0.54
DDX11-220ENST00000542244 A0A088AWK7 358 aa18.39■□□□□ 0.53
DDX11-220ENST00000542244 A0A1W2PS29 197 aa18.39■□□□□ 0.53
DDX11-220ENST00000542244 FAM90A27PA6NNH2 459 aa18.39■□□□□ 0.53
DDX11-220ENST00000542244 NPIPA2E9PIF3 369 aa18.39■□□□□ 0.53
DDX11-220ENST00000542244 NPIPA3F8WFD2 350 aa18.39■□□□□ 0.53
DDX11-220ENST00000542244 SCELO95171 688 aa18.39■□□□□ 0.53
DDX11-220ENST00000542244 ZNF10P21506 573 aaPredicted RBP18.39■□□□□ 0.53
DDX11-220ENST00000542244 HNRNPH2P55795 449 aaKnown RBP18.39■□□□□ 0.53
DDX11-220ENST00000542244 NUP107P57740 925 aa18.39■□□□□ 0.53
DDX11-220ENST00000542244 PLGLB1Q02325 96 aa18.39■□□□□ 0.53
DDX11-220ENST00000542244 TFF3Q07654 80 aa18.39■□□□□ 0.53
DDX11-220ENST00000542244 FOXO1Q12778 655 aa18.39■□□□□ 0.53
DDX11-220ENST00000542244 DDX39BQ13838 428 aaKnown RBP18.39■□□□□ 0.53
DDX11-220ENST00000542244 GRTP1Q5TC63 336 aa18.39■□□□□ 0.53
DDX11-220ENST00000542244 ADGRD1Q6QNK2 874 aa18.39■□□□□ 0.53
DDX11-220ENST00000542244 LYPD8Q6UX82 237 aa18.39■□□□□ 0.53
DDX11-220ENST00000542244 C9orf40Q8IXQ3 194 aa18.39■□□□□ 0.53
DDX11-220ENST00000542244 CENPLQ8N0S6 344 aaPredicted RBP18.39■□□□□ 0.53
DDX11-220ENST00000542244 TMEM251Q8N6I4 163 aa18.39■□□□□ 0.53
DDX11-220ENST00000542244 OR14A16Q8NHC5 309 aa18.39■□□□□ 0.53
DDX11-220ENST00000542244 MRRFQ96E11 262 aaKnown RBP18.39■□□□□ 0.53
DDX11-220ENST00000542244 SPOCK3Q9BQ16 436 aa18.39■□□□□ 0.53
DDX11-220ENST00000542244 TBCDQ9BTW9 1192 aa18.39■□□□□ 0.53
DDX11-220ENST00000542244 ZDHHC11Q9H8X9 412 aa18.39■□□□□ 0.53
DDX11-220ENST00000542244 NUDT4Q9NZJ9 180 aa18.39■□□□□ 0.53
DDX11-220ENST00000542244 NADKO95544 446 aaPredicted RBP18.38■□□□□ 0.53
DDX11-220ENST00000542244 CPN2P22792 545 aa18.38■□□□□ 0.53
DDX11-220ENST00000542244 SPRP35270 261 aaPredicted RBP18.38■□□□□ 0.53
DDX11-220ENST00000542244 PIGAP37287 484 aa18.38■□□□□ 0.53
DDX11-220ENST00000542244 MAGEA4P43358 317 aa18.38■□□□□ 0.53
DDX11-220ENST00000542244 MAGEA5P43359 124 aa18.38■□□□□ 0.53
DDX11-220ENST00000542244 IGLV3-21P80748 117 aaPredicted RBP18.38■□□□□ 0.53
DDX11-220ENST00000542244 GUCY2DQ02846 1103 aa18.38■□□□□ 0.53
DDX11-220ENST00000542244 PMPCAQ10713 525 aa18.38■□□□□ 0.53
DDX11-220ENST00000542244 ASPHQ12797 758 aa18.38■□□□□ 0.53
DDX11-220ENST00000542244 SLAMF1Q13291 335 aa18.38■□□□□ 0.53
DDX11-220ENST00000542244 LAPTM5Q13571 262 aa18.38■□□□□ 0.53
DDX11-220ENST00000542244 GXYLT1Q4G148 440 aa18.38■□□□□ 0.53
DDX11-220ENST00000542244 KHDRBS2Q5VWX1 349 aaKnown RBP18.38■□□□□ 0.53
DDX11-220ENST00000542244 MED27Q6P2C8 311 aa18.38■□□□□ 0.53
DDX11-220ENST00000542244 RAPH1Q70E73 1250 aa18.38■□□□□ 0.53
DDX11-220ENST00000542244 TEX9Q8N6V9 391 aa18.38■□□□□ 0.53
DDX11-220ENST00000542244 HUS1BQ8NHY5 278 aa18.38■□□□□ 0.53
DDX11-220ENST00000542244 STAG3L4Q8TBR4 150 aa18.38■□□□□ 0.53
DDX11-220ENST00000542244 UBTD2Q8WUN7 234 aa18.38■□□□□ 0.53
DDX11-220ENST00000542244 DAZLQ92904 295 aaKnown RBP18.38■□□□□ 0.53
DDX11-220ENST00000542244 ZNF717Q9BY31 904 aaPredicted RBP18.38■□□□□ 0.53
DDX11-220ENST00000542244 TUBA8Q9NY65 449 aaPredicted RBP18.38■□□□□ 0.53
DDX11-220ENST00000542244 RNF14Q9UBS8 474 aa18.38■□□□□ 0.53
DDX11-220ENST00000542244 ATG4BQ9Y4P1 393 aa18.38■□□□□ 0.53
DDX11-220ENST00000542244 K7EPI3 171 aa18.37■□□□□ 0.53
DDX11-220ENST00000542244 PLPP1O14494 284 aa18.37■□□□□ 0.53
DDX11-220ENST00000542244 KERAO60938 352 aa18.37■□□□□ 0.53
DDX11-220ENST00000542244 EEDO75530 441 aaKnown RBP18.37■□□□□ 0.53
DDX11-220ENST00000542244 TOXO94900 526 aa18.37■□□□□ 0.53
DDX11-220ENST00000542244 LRATO95237 230 aa18.37■□□□□ 0.53
DDX11-220ENST00000542244 S100BP04271 92 aaPredicted RBP18.37■□□□□ 0.53
DDX11-220ENST00000542244 IGKV3-11P04433 115 aa18.37■□□□□ 0.53
DDX11-220ENST00000542244 IGFBP2P18065 325 aa18.37■□□□□ 0.53
DDX11-220ENST00000542244 CNR1P21554 472 aa18.37■□□□□ 0.53
DDX11-220ENST00000542244 SSR2P43308 183 aa18.37■□□□□ 0.53
DDX11-220ENST00000542244 TLE4Q04727 773 aa18.37■□□□□ 0.53
DDX11-220ENST00000542244 HIST2H2ACQ16777 129 aaPredicted RBP18.37■□□□□ 0.53
DDX11-220ENST00000542244 PAGE2BQ5JRK9 111 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms