RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 ZPBPQ9BS86 351 aa5.18□□□□□ -1.58
CPSF7-220ENST00000541963 ABHD14AQ9BUJ0 271 aa5.18□□□□□ -1.58
CPSF7-220ENST00000541963 IL22Q9GZX6 179 aa5.18□□□□□ -1.58
CPSF7-220ENST00000541963 NUAK2Q9H093 628 aa5.18□□□□□ -1.58
CPSF7-220ENST00000541963 FAM96AQ9H5X1 160 aa5.18□□□□□ -1.58
CPSF7-220ENST00000541963 SYNPO2LQ9H987 977 aa5.18□□□□□ -1.58
CPSF7-220ENST00000541963 RDH14Q9HBH5 336 aa5.18□□□□□ -1.58
CPSF7-220ENST00000541963 TRMT1Q9NXH9 659 aaKnown RBP5.18□□□□□ -1.58
CPSF7-220ENST00000541963 SLC39A1Q9NY26 324 aa5.18□□□□□ -1.58
CPSF7-220ENST00000541963 SMARCAL1Q9NZC9 954 aa5.18□□□□□ -1.58
CPSF7-220ENST00000541963 ZNF624Q9P2J8 865 aaPredicted RBP5.18□□□□□ -1.58
CPSF7-220ENST00000541963 PISDQ9UG56 409 aa5.18□□□□□ -1.58
CPSF7-220ENST00000541963 PCYT1BQ9Y5K3 369 aaPredicted RBP5.18□□□□□ -1.58
CPSF7-220ENST00000541963 ARHGEF17Q96PE2 2063 aaPredicted RBP5.18□□□□□ -1.58
CPSF7-220ENST00000541963 ZFC3H1O60293 1989 aaKnown RBP5.18□□□□□ -1.58
CPSF7-220ENST00000541963 RP1P56715 2156 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 TRBV5-4A0A0C4DH59 114 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 CCDC162PA2VCL2 907 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 A6NLC8 198 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 A8MU76 341 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 CDRT15L2A8MXV6 281 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 B4E171 279 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 PEX12O00623 359 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 GAPDHSO14556 408 aaPredicted RBP5.17□□□□□ -1.58
CPSF7-220ENST00000541963 LIN7AO14910 233 aaPredicted RBP5.17□□□□□ -1.58
CPSF7-220ENST00000541963 TLX3O43711 291 aaPredicted RBP5.17□□□□□ -1.58
CPSF7-220ENST00000541963 NDUFS3O75489 264 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 EML2O95834 649 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 MBPP02686 304 aaPredicted RBP5.17□□□□□ -1.58
CPSF7-220ENST00000541963 ENO1P06733 434 aaKnown RBP5.17□□□□□ -1.58
CPSF7-220ENST00000541963 CHRM5P08912 532 aaPredicted RBP5.17□□□□□ -1.58
CPSF7-220ENST00000541963 THRAP10827 490 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 PSMA3P25788 255 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 ITPKBP27987 946 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 COILP38432 576 aaPredicted RBP5.17□□□□□ -1.58
CPSF7-220ENST00000541963 TSPAN7P41732 249 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 PAFAH1B1P43034 410 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 CD151P48509 253 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 FNTAP49354 379 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 TTPAP49638 278 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 PRLHRP49683 370 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 PDX1P52945 283 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 CTSCP53634 463 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 DRG2P55039 364 aaKnown RBP5.17□□□□□ -1.58
CPSF7-220ENST00000541963 SLC37A1P57057 533 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 TMPRSS3P57727 454 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 GNG11P61952 73 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 TBL3Q12788 808 aaKnown RBP5.17□□□□□ -1.58
CPSF7-220ENST00000541963 PRKAA1Q13131 559 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 RPA4Q13156 261 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 THOC5Q13769 683 aaKnown RBP5.17□□□□□ -1.58
CPSF7-220ENST00000541963 NFE2L1Q14494 772 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 PPP1R7Q15435 360 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 RPE65Q16518 533 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 HSP90B2PQ58FF3 399 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 DCAF12Q5T6F0 453 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 LIPMQ5VYY2 423 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 FAAH2Q6GMR7 532 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 C19orf48Q6RUI8 117 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 CEACAM20Q6UY09 585 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 OOSP2Q86WS3 158 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 PRELID2Q8N945 189 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 GABPB2Q8TAK5 448 aaPredicted RBP5.17□□□□□ -1.58
CPSF7-220ENST00000541963 GSDMBQ8TAX9 411 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 HTRA1Q92743 480 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 NAF1Q96HR8 494 aaKnown RBP5.17□□□□□ -1.58
CPSF7-220ENST00000541963 ZNF845Q96IR2 970 aaPredicted RBP5.17□□□□□ -1.58
CPSF7-220ENST00000541963 C12orf66Q96MD2 445 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 TEFMQ96QE5 360 aaKnown RBP5.17□□□□□ -1.58
CPSF7-220ENST00000541963 DDA1Q9BW61 102 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 TBC1D10AQ9BXI6 508 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 AP1M1Q9BXS5 423 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 RAB33BQ9H082 229 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 WWP1Q9H0M0 922 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 MVB12BQ9H7P6 319 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 MRM3Q9HC36 420 aaKnown RBP5.17□□□□□ -1.58
CPSF7-220ENST00000541963 SLC40A1Q9NP59 571 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 ASCL3Q9NQ33 180 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 IMP3Q9NV31 184 aaKnown RBP5.17□□□□□ -1.58
CPSF7-220ENST00000541963 ASB6Q9NWX5 421 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 TMEM160Q9NX00 188 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 RNF14Q9UBS8 474 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 PYCARDQ9ULZ3 195 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 SNX12Q9UMY4 172 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 PSMD13Q9UNM6 376 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 B3GNT3Q9Y2A9 372 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 UNC13CQ8NB66 2214 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 ASXL3Q9C0F0 2248 aa5.17□□□□□ -1.58
CPSF7-220ENST00000541963 SCN8AQ9UQD0 1980 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 IGLV3-16A0A075B6K0 115 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 CTAGE9A4FU28 777 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 SDR42E2A6NKP2 422 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 OR52A4PA6NMU1 304 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 EIF4E1BA6NMX2 242 aaKnown RBP5.16□□□□□ -1.58
CPSF7-220ENST00000541963 EFCAB7A8K855 629 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 VGLL3A8MV65 326 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 STMND1H3BQB6 276 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 CCL22O00626 93 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 NDC80O14777 642 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 POLR1CO15160 346 aaPredicted RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 414.8 ms