RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 ZC3H3Q8IXZ2 948 aaKnown RBP4.98□□□□□ -1.61
SNHG1-218ENST00000541615 APCDD1Q8J025 514 aa4.98□□□□□ -1.61
SNHG1-218ENST00000541615 GPR137CQ8N3F9 429 aa4.98□□□□□ -1.61
SNHG1-218ENST00000541615 PRSS35Q8N3Z0 413 aa4.98□□□□□ -1.61
SNHG1-218ENST00000541615 CELF5Q8N6W0 485 aaKnown RBP4.98□□□□□ -1.61
SNHG1-218ENST00000541615 PQLC3Q8N755 202 aa4.98□□□□□ -1.61
SNHG1-218ENST00000541615 RASGEF1AQ8N9B8 481 aa4.98□□□□□ -1.61
SNHG1-218ENST00000541615 HSD17B11Q8NBQ5 300 aa4.98□□□□□ -1.61
SNHG1-218ENST00000541615 ZNF248Q8NDW4 579 aa4.98□□□□□ -1.61
SNHG1-218ENST00000541615 OR9A2Q8NGT5 310 aa4.98□□□□□ -1.61
SNHG1-218ENST00000541615 OR5R1Q8NH85 324 aa4.98□□□□□ -1.61
SNHG1-218ENST00000541615 OR14A16Q8NHC5 309 aa4.98□□□□□ -1.61
SNHG1-218ENST00000541615 C9orf43Q8TAL5 461 aaPredicted RBP4.98□□□□□ -1.61
SNHG1-218ENST00000541615 THAP6Q8TBB0 222 aa4.98□□□□□ -1.61
SNHG1-218ENST00000541615 FBLIM1Q8WUP2 373 aa4.98□□□□□ -1.61
SNHG1-218ENST00000541615 XAGE5Q8WWM1 108 aa4.98□□□□□ -1.61
SNHG1-218ENST00000541615 NANOS1Q8WY41 292 aaKnown RBP4.98□□□□□ -1.61
SNHG1-218ENST00000541615 DPF1Q92782 380 aa4.98□□□□□ -1.61
SNHG1-218ENST00000541615 GJA10Q969M2 543 aa4.98□□□□□ -1.61
SNHG1-218ENST00000541615 SLAMF9Q96A28 289 aa4.98□□□□□ -1.61
SNHG1-218ENST00000541615 SLC35C1Q96A29 364 aa4.98□□□□□ -1.61
SNHG1-218ENST00000541615 EAF2Q96CJ1 260 aaPredicted RBP4.98□□□□□ -1.61
SNHG1-218ENST00000541615 ACSF2Q96CM8 615 aaPredicted RBP4.98□□□□□ -1.61
SNHG1-218ENST00000541615 SCRN2Q96FV2 425 aa4.98□□□□□ -1.61
SNHG1-218ENST00000541615 OTUB1Q96FW1 271 aaPredicted RBP4.98□□□□□ -1.61
SNHG1-218ENST00000541615 FBXL20Q96IG2 436 aa4.98□□□□□ -1.61
SNHG1-218ENST00000541615 BOD1Q96IK1 185 aa4.98□□□□□ -1.61
SNHG1-218ENST00000541615 ZNF514Q96K75 400 aaPredicted RBP4.98□□□□□ -1.61
SNHG1-218ENST00000541615 HIST1H2AHQ96KK5 128 aa4.98□□□□□ -1.61
SNHG1-218ENST00000541615 FAM210BQ96KR6 192 aa4.98□□□□□ -1.61
SNHG1-218ENST00000541615 RPL10LQ96L21 214 aaKnown RBP4.98□□□□□ -1.61
SNHG1-218ENST00000541615 LRR1Q96L50 414 aa4.98□□□□□ -1.61
SNHG1-218ENST00000541615 C3orf30Q96M34 536 aa4.98□□□□□ -1.61
SNHG1-218ENST00000541615 C5orf34Q96MH7 638 aa4.98□□□□□ -1.61
SNHG1-218ENST00000541615 OR1F2PQ96R84 312 aa4.98□□□□□ -1.61
SNHG1-218ENST00000541615 TSNAXQ99598 290 aaKnown RBP4.98□□□□□ -1.61
SNHG1-218ENST00000541615 MAP3K3Q99759 626 aa4.98□□□□□ -1.61
SNHG1-218ENST00000541615 HIST1H2AJQ99878 128 aa4.98□□□□□ -1.61
SNHG1-218ENST00000541615 CMSS1Q9BQ75 279 aaKnown RBP4.98□□□□□ -1.61
SNHG1-218ENST00000541615 NDUFAF3Q9BU61 184 aa4.98□□□□□ -1.61
SNHG1-218ENST00000541615 TMPRSS13Q9BYE2 586 aa4.98□□□□□ -1.61
SNHG1-218ENST00000541615 MAGEB5Q9BZ81 275 aa4.98□□□□□ -1.61
SNHG1-218ENST00000541615 SLC38A1Q9H2H9 487 aa4.98□□□□□ -1.61
SNHG1-218ENST00000541615 SEMA6BQ9H3T3 888 aa4.98□□□□□ -1.61
SNHG1-218ENST00000541615 NMNAT1Q9HAN9 279 aaPredicted RBP4.98□□□□□ -1.61
SNHG1-218ENST00000541615 ZBTB26Q9HCK0 441 aa4.98□□□□□ -1.61
SNHG1-218ENST00000541615 FBRSL1Q9HCM7 1045 aaKnown RBP4.98□□□□□ -1.61
SNHG1-218ENST00000541615 EIF2B3Q9NR50 452 aaKnown RBP4.98□□□□□ -1.61
SNHG1-218ENST00000541615 SMCO4Q9NRQ5 59 aa4.98□□□□□ -1.61
SNHG1-218ENST00000541615 SLC22A11Q9NSA0 550 aa4.98□□□□□ -1.61
SNHG1-218ENST00000541615 SLC6A13Q9NSD5 602 aa4.98□□□□□ -1.61
SNHG1-218ENST00000541615 TMEM184CQ9NVA4 438 aa4.98□□□□□ -1.61
SNHG1-218ENST00000541615 KLHL28Q9NXS3 571 aa4.98□□□□□ -1.61
SNHG1-218ENST00000541615 ZIM2Q9NZV7 527 aa4.98□□□□□ -1.61
SNHG1-218ENST00000541615 CXXC1Q9P0U4 656 aaPredicted RBP4.98□□□□□ -1.61
SNHG1-218ENST00000541615 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.98□□□□□ -1.61
SNHG1-218ENST00000541615 POMT2Q9UKY4 750 aa4.98□□□□□ -1.61
SNHG1-218ENST00000541615 DNPEPQ9ULA0 475 aa4.98□□□□□ -1.61
SNHG1-218ENST00000541615 GPR34Q9UPC5 381 aa4.98□□□□□ -1.61
SNHG1-218ENST00000541615 MOKQ9UQ07 419 aa4.98□□□□□ -1.61
SNHG1-218ENST00000541615 AKT3Q9Y243 479 aa4.98□□□□□ -1.61
SNHG1-218ENST00000541615 RNF6Q9Y252 685 aa4.98□□□□□ -1.61
SNHG1-218ENST00000541615 AAR2Q9Y312 384 aaKnown RBP4.98□□□□□ -1.61
SNHG1-218ENST00000541615 STARD10Q9Y365 291 aa4.98□□□□□ -1.61
SNHG1-218ENST00000541615 ASB1Q9Y576 335 aa4.98□□□□□ -1.61
SNHG1-218ENST00000541615 PCYT1BQ9Y5K3 369 aaPredicted RBP4.98□□□□□ -1.61
SNHG1-218ENST00000541615 GPR45Q9Y5Y3 372 aa4.98□□□□□ -1.61
SNHG1-218ENST00000541615 FAM205AQ6ZU69 1335 aa4.97□□□□□ -1.61
SNHG1-218ENST00000541615 NAV1Q8NEY1 1877 aa4.97□□□□□ -1.61
SNHG1-218ENST00000541615 NRKQ7Z2Y5 1582 aa4.97□□□□□ -1.61
SNHG1-218ENST00000541615 ELOA3CA0A087WX78 387 aaPredicted RBP4.97□□□□□ -1.61
SNHG1-218ENST00000541615 IQCMA0A1B0GVH7 501 aa4.97□□□□□ -1.61
SNHG1-218ENST00000541615 HMX2A2RU54 273 aa4.97□□□□□ -1.61
SNHG1-218ENST00000541615 TBC1D3FA6NER0 549 aaPredicted RBP4.97□□□□□ -1.61
SNHG1-218ENST00000541615 FAM74A7A6NL05 159 aa4.97□□□□□ -1.61
SNHG1-218ENST00000541615 ELOA3DA6NLF2 546 aaPredicted RBP4.97□□□□□ -1.61
SNHG1-218ENST00000541615 INMT-MINDY4F8WBC2 141 aa4.97□□□□□ -1.61
SNHG1-218ENST00000541615 K7EP13 123 aa4.97□□□□□ -1.61
SNHG1-218ENST00000541615 CLIC1O00299 241 aa4.97□□□□□ -1.61
SNHG1-218ENST00000541615 BHLHE40O14503 412 aa4.97□□□□□ -1.61
SNHG1-218ENST00000541615 EI24O14681 340 aa4.97□□□□□ -1.61
SNHG1-218ENST00000541615 SLC16A3O15427 465 aaKnown RBP4.97□□□□□ -1.61
SNHG1-218ENST00000541615 PRKAB2O43741 272 aa4.97□□□□□ -1.61
SNHG1-218ENST00000541615 RP2O75695 350 aa4.97□□□□□ -1.61
SNHG1-218ENST00000541615 AQP8O94778 261 aa4.97□□□□□ -1.61
SNHG1-218ENST00000541615 SORBS2O94875 1100 aaKnown RBP4.97□□□□□ -1.61
SNHG1-218ENST00000541615 C22orf31O95567 290 aa4.97□□□□□ -1.61
SNHG1-218ENST00000541615 LY86O95711 162 aa4.97□□□□□ -1.61
SNHG1-218ENST00000541615 LGI1O95970 557 aa4.97□□□□□ -1.61
SNHG1-218ENST00000541615 PNPP00491 289 aa4.97□□□□□ -1.61
SNHG1-218ENST00000541615 MPOP05164 745 aa4.97□□□□□ -1.61
SNHG1-218ENST00000541615 CD2P06729 351 aa4.97□□□□□ -1.61
SNHG1-218ENST00000541615 HMBSP08397 361 aa4.97□□□□□ -1.61
SNHG1-218ENST00000541615 NMBP08949 121 aa4.97□□□□□ -1.61
SNHG1-218ENST00000541615 CTXN2P0C2S0 81 aa4.97□□□□□ -1.61
SNHG1-218ENST00000541615 INSRRP14616 1297 aa4.97□□□□□ -1.61
SNHG1-218ENST00000541615 ZNF25P17030 456 aaPredicted RBP4.97□□□□□ -1.61
SNHG1-218ENST00000541615 COMTP21964 271 aa4.97□□□□□ -1.61
SNHG1-218ENST00000541615 CCNOP22674 350 aa4.97□□□□□ -1.61
SNHG1-218ENST00000541615 HMGB2P26583 209 aaKnown RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms