RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 PMS2P1A4D2B8 440 aa26.28■■□□□ 1.8
CCM2-218ENST00000541586 ACOT8O14734 319 aa26.28■■□□□ 1.8
CCM2-218ENST00000541586 EIF2S1P05198 315 aaKnown RBP26.28■■□□□ 1.8
CCM2-218ENST00000541586 HSD17B1P14061 328 aa26.28■■□□□ 1.8
CCM2-218ENST00000541586 SPINK2P20155 84 aa26.28■■□□□ 1.8
CCM2-218ENST00000541586 CERS1P27544 350 aa26.28■■□□□ 1.8
CCM2-218ENST00000541586 HNRNPFP52597 415 aaKnown RBP26.28■■□□□ 1.8
CCM2-218ENST00000541586 MAPK10P53779 464 aa26.28■■□□□ 1.8
CCM2-218ENST00000541586 SNRPNP63162 240 aaKnown RBP26.28■■□□□ 1.8
CCM2-218ENST00000541586 SLAMF1Q13291 335 aa26.28■■□□□ 1.8
CCM2-218ENST00000541586 PRSS53Q2L4Q9 553 aa26.28■■□□□ 1.8
CCM2-218ENST00000541586 SPATS1Q496A3 300 aa26.28■■□□□ 1.8
CCM2-218ENST00000541586 RUNDC3AQ59EK9 446 aa26.28■■□□□ 1.8
CCM2-218ENST00000541586 ZC3H12BQ5HYM0 836 aaKnown RBP26.28■■□□□ 1.8
CCM2-218ENST00000541586 MCATQ8IVS2 390 aaKnown RBP26.28■■□□□ 1.8
CCM2-218ENST00000541586 CACTIN-AS1Q8N1I8 211 aa26.28■■□□□ 1.8
CCM2-218ENST00000541586 ZCCHC7Q8N3Z6 543 aaKnown RBP26.28■■□□□ 1.8
CCM2-218ENST00000541586 DNAJC22Q8N4W6 341 aa26.28■■□□□ 1.8
CCM2-218ENST00000541586 CCDC115Q96NT0 180 aa26.28■■□□□ 1.8
CCM2-218ENST00000541586 PANX1Q96RD7 426 aa26.28■■□□□ 1.8
CCM2-218ENST00000541586 PCDHAC1Q9H158 963 aa26.28■■□□□ 1.8
CCM2-218ENST00000541586 FGF21Q9NSA1 209 aa26.28■■□□□ 1.8
CCM2-218ENST00000541586 BTNL2Q9UIR0 455 aa26.28■■□□□ 1.8
CCM2-218ENST00000541586 ERVK-11Q9UQG0 969 aa26.28■■□□□ 1.8
CCM2-218ENST00000541586 TMEM150CB9EJG8 249 aa26.28■■□□□ 1.8
CCM2-218ENST00000541586 RNASET2O00584 256 aaKnown RBP26.28■■□□□ 1.8
CCM2-218ENST00000541586 EEFSECP57772 596 aaKnown RBP26.28■■□□□ 1.8
CCM2-218ENST00000541586 BTN3A2P78410 334 aa26.28■■□□□ 1.8
CCM2-218ENST00000541586 LIPEQ05469 1076 aa26.28■■□□□ 1.8
CCM2-218ENST00000541586 FLOT2Q14254 428 aa26.28■■□□□ 1.8
CCM2-218ENST00000541586 MPEG1Q2M385 716 aa26.28■■□□□ 1.8
CCM2-218ENST00000541586 MRM1Q6IN84 353 aaKnown RBP26.28■■□□□ 1.8
CCM2-218ENST00000541586 RNF31Q96EP0 1072 aa26.28■■□□□ 1.8
CCM2-218ENST00000541586 GBP5Q96PP8 586 aa26.28■■□□□ 1.8
CCM2-218ENST00000541586 CTRCQ99895 268 aa26.28■■□□□ 1.8
CCM2-218ENST00000541586 APMAPQ9HDC9 416 aa26.28■■□□□ 1.8
CCM2-218ENST00000541586 PISDQ9UG56 409 aa26.28■■□□□ 1.8
CCM2-218ENST00000541586 PRDM4Q9UKN5 801 aa26.28■■□□□ 1.8
CCM2-218ENST00000541586 PTPRBP23467 1997 aa26.27■■□□□ 1.8
CCM2-218ENST00000541586 URADA6NGE7 173 aa26.27■■□□□ 1.8
CCM2-218ENST00000541586 PLD2O14939 933 aa26.27■■□□□ 1.8
CCM2-218ENST00000541586 ANP32DO95626 131 aa26.27■■□□□ 1.8
CCM2-218ENST00000541586 SMIM10L1P0DMW3 83 aa26.27■■□□□ 1.8
CCM2-218ENST00000541586 GSK3BP49841 420 aa26.27■■□□□ 1.8
CCM2-218ENST00000541586 ACY1Q03154 408 aa26.27■■□□□ 1.8
CCM2-218ENST00000541586 ZNF655Q8N720 491 aaPredicted RBP26.27■■□□□ 1.8
CCM2-218ENST00000541586 HIPK4Q8NE63 616 aa26.27■■□□□ 1.8
CCM2-218ENST00000541586 WDR36Q8NI36 951 aaKnown RBP26.27■■□□□ 1.8
CCM2-218ENST00000541586 ZCCHC10Q8TBK6 192 aa26.27■■□□□ 1.8
CCM2-218ENST00000541586 STMN2Q93045 179 aa26.27■■□□□ 1.8
CCM2-218ENST00000541586 CIDECQ96AQ7 238 aaPredicted RBP26.27■■□□□ 1.8
CCM2-218ENST00000541586 SMIM10Q96HG1 83 aa26.27■■□□□ 1.8
CCM2-218ENST00000541586 ALG2Q9H553 416 aa26.27■■□□□ 1.8
CCM2-218ENST00000541586 COPS7BQ9H9Q2 264 aaPredicted RBP26.27■■□□□ 1.8
CCM2-218ENST00000541586 ASB4Q9Y574 426 aa26.27■■□□□ 1.8
CCM2-218ENST00000541586 A0A1W2PNU3 283 aaPredicted RBP26.26■■□□□ 1.79
CCM2-218ENST00000541586 ZSCAN9O15535 394 aaPredicted RBP26.26■■□□□ 1.79
CCM2-218ENST00000541586 BCAS2O75934 225 aaPredicted RBP26.26■■□□□ 1.79
CCM2-218ENST00000541586 SCELO95171 688 aa26.26■■□□□ 1.79
CCM2-218ENST00000541586 CPSF4O95639 269 aaKnown RBP26.26■■□□□ 1.79
CCM2-218ENST00000541586 CTSBP07858 339 aa26.26■■□□□ 1.79
CCM2-218ENST00000541586 ALDH9A1P49189 494 aa26.26■■□□□ 1.79
CCM2-218ENST00000541586 VSX2P58304 361 aaPredicted RBP26.26■■□□□ 1.79
CCM2-218ENST00000541586 CSNK1A1LQ8N752 337 aa26.26■■□□□ 1.79
CCM2-218ENST00000541586 IKZF5Q9H5V7 419 aa26.26■■□□□ 1.79
CCM2-218ENST00000541586 FANCEQ9HB96 536 aa26.26■■□□□ 1.79
CCM2-218ENST00000541586 SLC39A1Q9NY26 324 aa26.26■■□□□ 1.79
CCM2-218ENST00000541586 KLK13Q9UKR3 277 aa26.26■■□□□ 1.79
CCM2-218ENST00000541586 PLCL2Q9UPR0 1127 aa26.26■■□□□ 1.79
CCM2-218ENST00000541586 TBX19O60806 448 aa26.25■■□□□ 1.79
CCM2-218ENST00000541586 KRT36O76013 467 aa26.25■■□□□ 1.79
CCM2-218ENST00000541586 EIF3IQ13347 325 aaKnown RBP26.25■■□□□ 1.79
CCM2-218ENST00000541586 MANEAQ5SRI9 462 aa26.25■■□□□ 1.79
CCM2-218ENST00000541586 NDUFAF5Q5TEU4 345 aa26.25■■□□□ 1.79
CCM2-218ENST00000541586 FAM47BQ8NA70 645 aa26.25■■□□□ 1.79
CCM2-218ENST00000541586 JADE3Q92613 823 aa26.25■■□□□ 1.79
CCM2-218ENST00000541586 AURKBQ96GD4 344 aaPredicted RBP26.25■■□□□ 1.79
CCM2-218ENST00000541586 SH3GL1Q99961 368 aa26.25■■□□□ 1.79
CCM2-218ENST00000541586 THUMPD3Q9BV44 507 aaKnown RBP26.25■■□□□ 1.79
CCM2-218ENST00000541586 CHRNA10Q9GZZ6 450 aa26.25■■□□□ 1.79
CCM2-218ENST00000541586 STARD5Q9NSY2 213 aa26.25■■□□□ 1.79
CCM2-218ENST00000541586 SIDT1Q9NXL6 827 aaKnown RBP26.25■■□□□ 1.79
CCM2-218ENST00000541586 POLR1CO15160 346 aaPredicted RBP26.25■■□□□ 1.79
CCM2-218ENST00000541586 PSMG1O95456 288 aa26.25■■□□□ 1.79
CCM2-218ENST00000541586 ETV5P41161 510 aa26.25■■□□□ 1.79
CCM2-218ENST00000541586 LRRC74AQ0VAA2 488 aa26.25■■□□□ 1.79
CCM2-218ENST00000541586 TRAP1Q12931 704 aaKnown RBP26.25■■□□□ 1.79
CCM2-218ENST00000541586 ABHD13Q7L211 337 aa26.25■■□□□ 1.79
CCM2-218ENST00000541586 IFNEQ86WN2 208 aa26.25■■□□□ 1.79
CCM2-218ENST00000541586 ZNF501Q96CX3 271 aaPredicted RBP26.25■■□□□ 1.79
CCM2-218ENST00000541586 CPPED1Q9BRF8 314 aaPredicted RBP26.25■■□□□ 1.79
CCM2-218ENST00000541586 SCNM1Q9BWG6 230 aa26.25■■□□□ 1.79
CCM2-218ENST00000541586 SERTAD3Q9UJW9 196 aa26.25■■□□□ 1.79
CCM2-218ENST00000541586 ATG4BQ9Y4P1 393 aa26.25■■□□□ 1.79
CCM2-218ENST00000541586 DRD2P14416 443 aa26.24■■□□□ 1.79
CCM2-218ENST00000541586 GABRA4P48169 554 aa26.24■■□□□ 1.79
CCM2-218ENST00000541586 MC2RQ01718 297 aa26.24■■□□□ 1.79
CCM2-218ENST00000541586 SNCBQ16143 134 aa26.24■■□□□ 1.79
CCM2-218ENST00000541586 TMEM214Q6NUQ4 689 aaKnown RBP26.24■■□□□ 1.79
CCM2-218ENST00000541586 ZNF621Q6ZSS3 439 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms