RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 ARMC5Q96C12 935 aa14.38□□□□□ -0.11
SMARCA4-207ENST00000541122 RIOK2Q9BVS4 552 aaKnown RBP14.38□□□□□ -0.11
SMARCA4-207ENST00000541122 SYT4Q9H2B2 425 aa14.38□□□□□ -0.11
SMARCA4-207ENST00000541122 ZDHHC4Q9NPG8 344 aa14.38□□□□□ -0.11
SMARCA4-207ENST00000541122 TEX13DA0A0J9YY54 714 aaPredicted RBP14.38□□□□□ -0.11
SMARCA4-207ENST00000541122 ZCWPW2A0A1B0GU75 182 aa14.38□□□□□ -0.11
SMARCA4-207ENST00000541122 TRAPPC13A5PLN9 417 aa14.38□□□□□ -0.11
SMARCA4-207ENST00000541122 CRHBPP24387 322 aa14.38□□□□□ -0.11
SMARCA4-207ENST00000541122 ATXN7L3Q14CW9 347 aaPredicted RBP14.38□□□□□ -0.11
SMARCA4-207ENST00000541122 GPRC6AQ5T6X5 926 aa14.38□□□□□ -0.11
SMARCA4-207ENST00000541122 MINDY3Q9H8M7 445 aa14.38□□□□□ -0.11
SMARCA4-207ENST00000541122 IGSF5Q9NSI5 407 aa14.38□□□□□ -0.11
SMARCA4-207ENST00000541122 C1orf196B1AJZ1 125 aa14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 MMP20O60882 483 aa14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 RASGRP1O95267 797 aa14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 APODP05090 189 aa14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 ALPPL2P10696 532 aa14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 SRCP12931 536 aa14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 JUPP14923 745 aa14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 SMPD1P17405 629 aa14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 IL32P24001 234 aa14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 ADH6P28332 368 aa14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 RBMXP38159 391 aaKnown RBP14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 BDKRB1P46663 353 aa14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 DTWD1Q8N5C7 304 aa14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 IL12RB2Q99665 862 aa14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 CRTAC1Q9NQ79 661 aa14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 ERVK-19Q9WJR5 959 aa14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 LIPT1Q9Y234 373 aa14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 VILLO15195 856 aa14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 NR2C1P13056 603 aa14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 CDKN2DP55273 166 aa14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 ILF3Q12906 894 aaKnown RBP eCLIP14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 ZNF584Q8IVC4 421 aa14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 OR2T35Q8NGX2 323 aa14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 FRS2Q8WU20 508 aa14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 GORASP2Q9H8Y8 452 aa14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 PCDHB16Q9NRJ7 776 aa14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 KCNN3Q9UGI6 736 aa14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 PCTPQ9UKL6 214 aa14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 PIK3C2AO00443 1686 aa14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 ZNF208O43345 1280 aa14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 MITFO75030 526 aaPredicted RBP14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 CLDN7O95471 211 aa14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 SCGB1D2O95969 90 aa14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 CXCR1P25024 350 aa14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 ZMYND11Q15326 602 aa14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 FAM182AQ5T1J6 154 aa14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 LINC00299Q6ZSB3 139 aa14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 CLDN19Q8N6F1 224 aa14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 ARL14EPQ8N8R7 260 aaPredicted RBP14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 OR7G1Q8NGA0 311 aa14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 CASTOR1Q8WTX7 329 aa14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 CCDC120Q96HB5 630 aa14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 OR51B5Q9H339 312 aa14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 COPS7AQ9UBW8 275 aa14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 ACSL6Q9UKU0 697 aa14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 FARSAQ9Y285 508 aaKnown RBP14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 PTGDR2Q9Y5Y4 395 aa14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 CAMTA1Q9Y6Y1 1673 aa14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 DUSP11O75319 330 aaKnown RBP14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 OSMP13725 252 aa14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 GPX3P22352 226 aa14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 CAPZA1P52907 286 aa14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 ZNF252P-AS1Q0IIN9 211 aa14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 LRRC32Q14392 662 aa14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 MAPK14Q16539 360 aa14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 BCL2L15Q5TBC7 163 aa14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 OR4K1Q8NGD4 311 aa14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 SNAPC3Q92966 411 aa14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 NECAB3Q96P71 396 aaPredicted RBP14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 WDR45Q9Y484 360 aa14.37□□□□□ -0.11
SMARCA4-207ENST00000541122 UNC119BA6NIH7 251 aa14.36□□□□□ -0.11
SMARCA4-207ENST00000541122 NARSO43776 548 aaKnown RBP14.36□□□□□ -0.11
SMARCA4-207ENST00000541122 OAZ2O95190 189 aa14.36□□□□□ -0.11
SMARCA4-207ENST00000541122 SELPP16109 830 aa14.36□□□□□ -0.11
SMARCA4-207ENST00000541122 GK2Q14410 553 aaPredicted RBP14.36□□□□□ -0.11
SMARCA4-207ENST00000541122 TBCEQ15813 527 aaPredicted RBP14.36□□□□□ -0.11
SMARCA4-207ENST00000541122 TAS1R3Q7RTX0 852 aa14.36□□□□□ -0.11
SMARCA4-207ENST00000541122 GALNT7Q86SF2 657 aa14.36□□□□□ -0.11
SMARCA4-207ENST00000541122 ISCA2Q86U28 154 aa14.36□□□□□ -0.11
SMARCA4-207ENST00000541122 SLC22A15Q8IZD6 547 aa14.36□□□□□ -0.11
SMARCA4-207ENST00000541122 TBC1D15Q8TC07 691 aa14.36□□□□□ -0.11
SMARCA4-207ENST00000541122 FIZ1Q96SL8 496 aa14.36□□□□□ -0.11
SMARCA4-207ENST00000541122 CNOT2Q9NZN8 540 aaKnown RBP14.36□□□□□ -0.11
SMARCA4-207ENST00000541122 MYH6P13533 1939 aa14.36□□□□□ -0.11
SMARCA4-207ENST00000541122 VNN2O95498 520 aa14.36□□□□□ -0.11
SMARCA4-207ENST00000541122 CXCL14O95715 111 aa14.36□□□□□ -0.11
SMARCA4-207ENST00000541122 UCHL1P09936 223 aa14.36□□□□□ -0.11
SMARCA4-207ENST00000541122 RGS19P49795 217 aa14.36□□□□□ -0.11
SMARCA4-207ENST00000541122 CLDN10P78369 228 aa14.36□□□□□ -0.11
SMARCA4-207ENST00000541122 CCDC58Q4VC31 144 aa14.36□□□□□ -0.11
SMARCA4-207ENST00000541122 TPGS2Q68CL5 300 aa14.36□□□□□ -0.11
SMARCA4-207ENST00000541122 NPAS4Q8IUM7 802 aa14.36□□□□□ -0.11
SMARCA4-207ENST00000541122 DCAF4L2Q8NA75 395 aa14.36□□□□□ -0.11
SMARCA4-207ENST00000541122 ZSCAN1Q8NBB4 408 aa14.36□□□□□ -0.11
SMARCA4-207ENST00000541122 GALNT11Q8NCW6 608 aa14.36□□□□□ -0.11
SMARCA4-207ENST00000541122 OR9A1PQ8NGU1 263 aa14.36□□□□□ -0.11
SMARCA4-207ENST00000541122 SUN3Q8TAQ9 357 aa14.36□□□□□ -0.11
SMARCA4-207ENST00000541122 CNOT9Q92600 299 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms