RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 EHD1Q9H4M9 534 aa11.54□□□□□ -0.56
COPS7A-211ENST00000540408 LYRM4Q9HD34 91 aa11.54□□□□□ -0.56
COPS7A-211ENST00000540408 RASSF1Q9NS23 344 aa11.54□□□□□ -0.56
COPS7A-211ENST00000540408 RYDENQ9NUL5 291 aaKnown RBP11.54□□□□□ -0.56
COPS7A-211ENST00000540408 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.54□□□□□ -0.56
COPS7A-211ENST00000540408 TUBA8Q9NY65 449 aaPredicted RBP11.54□□□□□ -0.56
COPS7A-211ENST00000540408 SLC17A6Q9P2U8 582 aa11.54□□□□□ -0.56
COPS7A-211ENST00000540408 BOKQ9UMX3 212 aaPredicted RBP11.54□□□□□ -0.56
COPS7A-211ENST00000540408 ATG4BQ9Y4P1 393 aa11.54□□□□□ -0.56
COPS7A-211ENST00000540408 SPG11Q96JI7 2443 aa11.54□□□□□ -0.56
COPS7A-211ENST00000540408 NF1P21359 2839 aa11.53□□□□□ -0.56
COPS7A-211ENST00000540408 FAM95CA0A1B0GW59 222 aa11.53□□□□□ -0.56
COPS7A-211ENST00000540408 NCF1BA6NI72 391 aaPredicted RBP11.53□□□□□ -0.56
COPS7A-211ENST00000540408 NCF1CA8MVU1 366 aaPredicted RBP11.53□□□□□ -0.56
COPS7A-211ENST00000540408 SYT5O00445 386 aa11.53□□□□□ -0.56
COPS7A-211ENST00000540408 DVL2O14641 736 aa11.53□□□□□ -0.56
COPS7A-211ENST00000540408 LDB3O75112 727 aa11.53□□□□□ -0.56
COPS7A-211ENST00000540408 CCL3P10147 92 aa11.53□□□□□ -0.56
COPS7A-211ENST00000540408 NCF1P14598 390 aaPredicted RBP11.53□□□□□ -0.56
COPS7A-211ENST00000540408 FOSL1P15407 271 aa11.53□□□□□ -0.56
COPS7A-211ENST00000540408 HOXB4P17483 251 aaPredicted RBP11.53□□□□□ -0.56
COPS7A-211ENST00000540408 ADH7P40394 386 aa11.53□□□□□ -0.56
COPS7A-211ENST00000540408 ELK3P41970 407 aa11.53□□□□□ -0.56
COPS7A-211ENST00000540408 SLC6A12P48065 614 aa11.53□□□□□ -0.56
COPS7A-211ENST00000540408 FOXO1Q12778 655 aa11.53□□□□□ -0.56
COPS7A-211ENST00000540408 ASPHQ12797 758 aa11.53□□□□□ -0.56
COPS7A-211ENST00000540408 ILF2Q12905 390 aaKnown RBP11.53□□□□□ -0.56
COPS7A-211ENST00000540408 LAPTM5Q13571 262 aa11.53□□□□□ -0.56
COPS7A-211ENST00000540408 TSNQ15631 228 aaKnown RBP11.53□□□□□ -0.56
COPS7A-211ENST00000540408 PIGGQ5H8A4 983 aa11.53□□□□□ -0.56
COPS7A-211ENST00000540408 PAGE2BQ5JRK9 111 aa11.53□□□□□ -0.56
COPS7A-211ENST00000540408 HP1BP3Q5SSJ5 553 aaPredicted RBP11.53□□□□□ -0.56
COPS7A-211ENST00000540408 CAMKMTQ7Z624 323 aa11.53□□□□□ -0.56
COPS7A-211ENST00000540408 IGDCC3Q8IVU1 814 aa11.53□□□□□ -0.56
COPS7A-211ENST00000540408 DND1Q8IYX4 353 aaKnown RBP11.53□□□□□ -0.56
COPS7A-211ENST00000540408 FBXW8Q8N3Y1 598 aa11.53□□□□□ -0.56
COPS7A-211ENST00000540408 ZNF321PQ8N8H1 164 aa11.53□□□□□ -0.56
COPS7A-211ENST00000540408 PTCD3Q96EY7 689 aaKnown RBP11.53□□□□□ -0.56
COPS7A-211ENST00000540408 RBM18Q96H35 190 aaKnown RBP11.53□□□□□ -0.56
COPS7A-211ENST00000540408 ART5Q96L15 291 aa11.53□□□□□ -0.56
COPS7A-211ENST00000540408 PWWP2AQ96N64 755 aa11.53□□□□□ -0.56
COPS7A-211ENST00000540408 DGAT2Q96PD7 388 aa11.53□□□□□ -0.56
COPS7A-211ENST00000540408 ALPK1Q96QP1 1244 aa11.53□□□□□ -0.56
COPS7A-211ENST00000540408 KRT12Q99456 494 aa11.53□□□□□ -0.56
COPS7A-211ENST00000540408 TBCDQ9BTW9 1192 aa11.53□□□□□ -0.56
COPS7A-211ENST00000540408 EFCAB11Q9BUY7 163 aa11.53□□□□□ -0.56
COPS7A-211ENST00000540408 CNPPD1Q9BV87 410 aa11.53□□□□□ -0.56
COPS7A-211ENST00000540408 PRDM7Q9NQW5 492 aa11.53□□□□□ -0.56
COPS7A-211ENST00000540408 DNAJC11Q9NVH1 559 aa11.53□□□□□ -0.56
COPS7A-211ENST00000540408 ZNF358Q9NW07 568 aa11.53□□□□□ -0.56
COPS7A-211ENST00000540408 NSMCE4AQ9NXX6 385 aa11.53□□□□□ -0.56
COPS7A-211ENST00000540408 WWOXQ9NZC7 414 aa11.53□□□□□ -0.56
COPS7A-211ENST00000540408 MTRF1LQ9UGC7 380 aaKnown RBP11.53□□□□□ -0.56
COPS7A-211ENST00000540408 FOXD3Q9UJU5 478 aaPredicted RBP11.53□□□□□ -0.56
COPS7A-211ENST00000540408 CHMP2BQ9UQN3 213 aa11.53□□□□□ -0.56
COPS7A-211ENST00000540408 ZNF407Q9C0G0 2248 aa11.53□□□□□ -0.56
COPS7A-211ENST00000540408 MTORP42345 2549 aa11.53□□□□□ -0.56
COPS7A-211ENST00000540408 CELA3AP09093 270 aa11.52□□□□□ -0.57
COPS7A-211ENST00000540408 DRD2P14416 443 aa11.52□□□□□ -0.57
COPS7A-211ENST00000540408 PIGAP37287 484 aa11.52□□□□□ -0.57
COPS7A-211ENST00000540408 MGAT5Q09328 741 aa11.52□□□□□ -0.57
COPS7A-211ENST00000540408 FRG1Q14331 258 aaKnown RBP11.52□□□□□ -0.57
COPS7A-211ENST00000540408 SF3B4Q15427 424 aaKnown RBP eCLIP11.52□□□□□ -0.57
COPS7A-211ENST00000540408 TGFBIQ15582 683 aa11.52□□□□□ -0.57
COPS7A-211ENST00000540408 AP5B1Q2VPB7 878 aa11.52□□□□□ -0.57
COPS7A-211ENST00000540408 C18orf21Q32NC0 220 aaPredicted RBP11.52□□□□□ -0.57
COPS7A-211ENST00000540408 FLYWCH1Q4VC44 716 aa11.52□□□□□ -0.57
COPS7A-211ENST00000540408 TRMT10BQ6PF06 316 aaKnown RBP11.52□□□□□ -0.57
COPS7A-211ENST00000540408 CHSY3Q70JA7 882 aa11.52□□□□□ -0.57
COPS7A-211ENST00000540408 ZC3HC1Q86WB0 502 aaKnown RBP11.52□□□□□ -0.57
COPS7A-211ENST00000540408 LRRC8AQ8IWT6 810 aa11.52□□□□□ -0.57
COPS7A-211ENST00000540408 SLC15A4Q8N697 577 aa11.52□□□□□ -0.57
COPS7A-211ENST00000540408 SNX31Q8N9S9 440 aa11.52□□□□□ -0.57
COPS7A-211ENST00000540408 NUBPLQ8TB37 319 aa11.52□□□□□ -0.57
COPS7A-211ENST00000540408 FAM222BQ8WU58 562 aa11.52□□□□□ -0.57
COPS7A-211ENST00000540408 UBE2E3Q969T4 207 aa11.52□□□□□ -0.57
COPS7A-211ENST00000540408 F2RL3Q96RI0 385 aa11.52□□□□□ -0.57
COPS7A-211ENST00000540408 LIME1Q9H400 295 aa11.52□□□□□ -0.57
COPS7A-211ENST00000540408 POPDC3Q9HBV1 291 aa11.52□□□□□ -0.57
COPS7A-211ENST00000540408 ZFP64Q9NPA5 681 aa11.52□□□□□ -0.57
COPS7A-211ENST00000540408 ACKR4Q9NPB9 350 aa11.52□□□□□ -0.57
COPS7A-211ENST00000540408 QPCTLQ9NXS2 382 aa11.52□□□□□ -0.57
COPS7A-211ENST00000540408 CRIM1Q9NZV1 1036 aa11.52□□□□□ -0.57
COPS7A-211ENST00000540408 CNIH4Q9P003 139 aa11.52□□□□□ -0.57
COPS7A-211ENST00000540408 PLEKHA6Q9Y2H5 1048 aa11.52□□□□□ -0.57
COPS7A-211ENST00000540408 PPP2R2CQ9Y2T4 447 aa11.52□□□□□ -0.57
COPS7A-211ENST00000540408 DNAJC13O75165 2243 aa11.52□□□□□ -0.57
COPS7A-211ENST00000540408 IQANK1A0A1B0GTG1 560 aa11.51□□□□□ -0.57
COPS7A-211ENST00000540408 A6NNC1 897 aa11.51□□□□□ -0.57
COPS7A-211ENST00000540408 AHRRA9YTQ3 701 aa11.51□□□□□ -0.57
COPS7A-211ENST00000540408 PROM1O43490 865 aa11.51□□□□□ -0.57
COPS7A-211ENST00000540408 STK16O75716 305 aa11.51□□□□□ -0.57
COPS7A-211ENST00000540408 ETHE1O95571 254 aa11.51□□□□□ -0.57
COPS7A-211ENST00000540408 BMP5P22003 454 aa11.51□□□□□ -0.57
COPS7A-211ENST00000540408 CPN2P22792 545 aa11.51□□□□□ -0.57
COPS7A-211ENST00000540408 SERPINB3P29508 390 aa11.51□□□□□ -0.57
COPS7A-211ENST00000540408 GGT5P36269 586 aa11.51□□□□□ -0.57
COPS7A-211ENST00000540408 MSH2P43246 934 aa11.51□□□□□ -0.57
COPS7A-211ENST00000540408 ASCL1P50553 236 aa11.51□□□□□ -0.57
COPS7A-211ENST00000540408 TAS2R39P59534 338 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms