RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 CAPZA2P47755 286 aa12.47□□□□□ -0.41
DNMT1-203ENST00000540357 TEKQ02763 1124 aa12.47□□□□□ -0.41
DNMT1-203ENST00000540357 TOR1AIP1Q5JTV8 583 aa12.47□□□□□ -0.41
DNMT1-203ENST00000540357 GRHL2Q6ISB3 625 aa12.47□□□□□ -0.41
DNMT1-203ENST00000540357 BRAT1Q6PJG6 821 aa12.47□□□□□ -0.41
DNMT1-203ENST00000540357 ARL9Q6T311 187 aa12.47□□□□□ -0.41
DNMT1-203ENST00000540357 BTLAQ7Z6A9 289 aa12.47□□□□□ -0.41
DNMT1-203ENST00000540357 TIGD4Q8IY51 512 aa12.47□□□□□ -0.41
DNMT1-203ENST00000540357 ZNF433Q8N7K0 673 aaPredicted RBP12.47□□□□□ -0.41
DNMT1-203ENST00000540357 SAMD12Q8N8I0 201 aa12.47□□□□□ -0.41
DNMT1-203ENST00000540357 ARL14EPQ8N8R7 260 aaPredicted RBP12.47□□□□□ -0.41
DNMT1-203ENST00000540357 C3orf58Q8NDZ4 430 aa12.47□□□□□ -0.41
DNMT1-203ENST00000540357 BBS10Q8TAM1 723 aa12.47□□□□□ -0.41
DNMT1-203ENST00000540357 DHRS1Q96LJ7 313 aa12.47□□□□□ -0.41
DNMT1-203ENST00000540357 CSF3RQ99062 836 aa12.47□□□□□ -0.41
DNMT1-203ENST00000540357 NIPAL2Q9H841 368 aa12.47□□□□□ -0.41
DNMT1-203ENST00000540357 CD93Q9NPY3 652 aa12.47□□□□□ -0.41
DNMT1-203ENST00000540357 KLHL21Q9UJP4 597 aa12.47□□□□□ -0.41
DNMT1-203ENST00000540357 PCDHGA6Q9Y5G7 932 aa12.47□□□□□ -0.41
DNMT1-203ENST00000540357 PCDH8O95206 1070 aa12.46□□□□□ -0.41
DNMT1-203ENST00000540357 GBAP04062 536 aa12.46□□□□□ -0.41
DNMT1-203ENST00000540357 BPIP17213 487 aa12.46□□□□□ -0.41
DNMT1-203ENST00000540357 TRAM2Q15035 370 aa12.46□□□□□ -0.41
DNMT1-203ENST00000540357 TATDN3Q17R31 274 aa12.46□□□□□ -0.41
DNMT1-203ENST00000540357 FNDC3BQ53EP0 1204 aaKnown RBP12.46□□□□□ -0.41
DNMT1-203ENST00000540357 PRAMEF14Q5SWL7 426 aa12.46□□□□□ -0.41
DNMT1-203ENST00000540357 PRAMEF13Q5VWM6 474 aa12.46□□□□□ -0.41
DNMT1-203ENST00000540357 AFMIDQ63HM1 303 aa12.46□□□□□ -0.41
DNMT1-203ENST00000540357 OOSP2Q86WS3 158 aa12.46□□□□□ -0.41
DNMT1-203ENST00000540357 TNFAIP8L1Q8WVP5 186 aa12.46□□□□□ -0.41
DNMT1-203ENST00000540357 KIAA1143Q96AT1 154 aaPredicted RBP12.46□□□□□ -0.41
DNMT1-203ENST00000540357 ZNF558Q96NG5 402 aa12.46□□□□□ -0.41
DNMT1-203ENST00000540357 TMEM27Q9HBJ8 222 aa12.46□□□□□ -0.41
DNMT1-203ENST00000540357 MGAT4AQ9UM21 535 aa12.46□□□□□ -0.41
DNMT1-203ENST00000540357 KCNK5O95279 499 aa12.46□□□□□ -0.41
DNMT1-203ENST00000540357 LAMP2P13473 410 aa12.46□□□□□ -0.41
DNMT1-203ENST00000540357 LHCGRP22888 699 aa12.46□□□□□ -0.41
DNMT1-203ENST00000540357 VIPR1P32241 457 aa12.46□□□□□ -0.41
DNMT1-203ENST00000540357 NTRK2Q16620 822 aa12.46□□□□□ -0.41
DNMT1-203ENST00000540357 DLK2Q6UY11 383 aa12.46□□□□□ -0.41
DNMT1-203ENST00000540357 GDPD4Q6W3E5 623 aa12.46□□□□□ -0.41
DNMT1-203ENST00000540357 CBARPQ8N350 705 aaPredicted RBP12.46□□□□□ -0.41
DNMT1-203ENST00000540357 MFSD4AQ8N468 514 aa12.46□□□□□ -0.41
DNMT1-203ENST00000540357 C2orf73Q8N5S3 287 aaPredicted RBP12.46□□□□□ -0.41
DNMT1-203ENST00000540357 RGMAQ96B86 450 aa12.46□□□□□ -0.41
DNMT1-203ENST00000540357 COQ8BQ96D53 544 aa12.46□□□□□ -0.41
DNMT1-203ENST00000540357 ZNF514Q96K75 400 aaPredicted RBP12.46□□□□□ -0.41
DNMT1-203ENST00000540357 RIOK2Q9BVS4 552 aaKnown RBP12.46□□□□□ -0.41
DNMT1-203ENST00000540357 NT5DC2Q9H857 520 aa12.46□□□□□ -0.41
DNMT1-203ENST00000540357 BRD7Q9NPI1 651 aa12.46□□□□□ -0.41
DNMT1-203ENST00000540357 TEX51A0A1B0GUA7 166 aa12.46□□□□□ -0.42
DNMT1-203ENST00000540357 NEDD8-MDP1E9PL57 170 aa12.46□□□□□ -0.42
DNMT1-203ENST00000540357 EEF1E1O43324 174 aaKnown RBP12.46□□□□□ -0.42
DNMT1-203ENST00000540357 OR1F1O43749 312 aa12.46□□□□□ -0.42
DNMT1-203ENST00000540357 MMP2P08253 660 aa12.46□□□□□ -0.42
DNMT1-203ENST00000540357 ATXN8OSP0DMR3 200 aa12.46□□□□□ -0.42
DNMT1-203ENST00000540357 RGS1Q08116 209 aa12.46□□□□□ -0.42
DNMT1-203ENST00000540357 FRMPD2BQ6IN97 320 aa12.46□□□□□ -0.42
DNMT1-203ENST00000540357 METAP1DQ6UB28 335 aaPredicted RBP12.46□□□□□ -0.42
DNMT1-203ENST00000540357 UNC5DQ6UXZ4 953 aa12.46□□□□□ -0.42
DNMT1-203ENST00000540357 COMMD7Q86VX2 200 aa12.46□□□□□ -0.42
DNMT1-203ENST00000540357 GID4Q8IVV7 300 aa12.46□□□□□ -0.42
DNMT1-203ENST00000540357 FERD3LQ96RJ6 166 aa12.46□□□□□ -0.42
DNMT1-203ENST00000540357 ASAH2Q9NR71 780 aa12.46□□□□□ -0.42
DNMT1-203ENST00000540357 MAT2BQ9NZL9 334 aa12.46□□□□□ -0.42
DNMT1-203ENST00000540357 MARK1Q9P0L2 795 aa12.46□□□□□ -0.42
DNMT1-203ENST00000540357 MMP20O60882 483 aa12.45□□□□□ -0.42
DNMT1-203ENST00000540357 RGS9O75916 674 aaPredicted RBP12.45□□□□□ -0.42
DNMT1-203ENST00000540357 PRAMEF12O95522 483 aa12.45□□□□□ -0.42
DNMT1-203ENST00000540357 HPGDP15428 266 aa12.45□□□□□ -0.42
DNMT1-203ENST00000540357 TSPAN5P62079 268 aa12.45□□□□□ -0.42
DNMT1-203ENST00000540357 ZXDBP98169 803 aa12.45□□□□□ -0.42
DNMT1-203ENST00000540357 SMARCD3Q6STE5 483 aa12.45□□□□□ -0.42
DNMT1-203ENST00000540357 Q6ZPB1 254 aaPredicted RBP12.45□□□□□ -0.42
DNMT1-203ENST00000540357 CLDN22Q8N7P3 220 aa12.45□□□□□ -0.42
DNMT1-203ENST00000540357 OR8J2Q8NGG1 315 aa12.45□□□□□ -0.42
DNMT1-203ENST00000540357 RPLP0P6Q8NHW5 317 aa12.45□□□□□ -0.42
DNMT1-203ENST00000540357 IFT27Q9BW83 186 aa12.45□□□□□ -0.42
DNMT1-203ENST00000540357 NOX1Q9Y5S8 564 aa12.45□□□□□ -0.42
DNMT1-203ENST00000540357 MT-ND5P03915 603 aa12.45□□□□□ -0.42
DNMT1-203ENST00000540357 CDKN2CP42773 168 aa12.45□□□□□ -0.42
DNMT1-203ENST00000540357 GBX2P52951 348 aaPredicted RBP12.45□□□□□ -0.42
DNMT1-203ENST00000540357 FAM46CQ5VWP2 391 aa12.45□□□□□ -0.42
DNMT1-203ENST00000540357 SBSNQ6UWP8 590 aa12.45□□□□□ -0.42
DNMT1-203ENST00000540357 GET4Q7L5D6 327 aaPredicted RBP12.45□□□□□ -0.42
DNMT1-203ENST00000540357 OR5H6Q8NGV6 325 aa12.45□□□□□ -0.42
DNMT1-203ENST00000540357 HUS1BQ8NHY5 278 aa12.45□□□□□ -0.42
DNMT1-203ENST00000540357 OR4K3Q96R72 315 aa12.45□□□□□ -0.42
DNMT1-203ENST00000540357 TBX5Q99593 518 aa12.45□□□□□ -0.42
DNMT1-203ENST00000540357 DPCDQ9BVM2 203 aaPredicted RBP12.45□□□□□ -0.42
DNMT1-203ENST00000540357 OR51I1Q9H343 314 aa12.45□□□□□ -0.42
DNMT1-203ENST00000540357 LTB4R2Q9NPC1 389 aa12.45□□□□□ -0.42
DNMT1-203ENST00000540357 UPB1Q9UBR1 384 aa12.45□□□□□ -0.42
DNMT1-203ENST00000540357 COCHO43405 550 aa12.45□□□□□ -0.42
DNMT1-203ENST00000540357 GPR37L1O60883 481 aa12.45□□□□□ -0.42
DNMT1-203ENST00000540357 GJB3O75712 270 aa12.45□□□□□ -0.42
DNMT1-203ENST00000540357 HK3P52790 923 aa12.45□□□□□ -0.42
DNMT1-203ENST00000540357 UGT8Q16880 541 aa12.45□□□□□ -0.42
DNMT1-203ENST00000540357 TMIGD1Q6UXZ0 262 aa12.45□□□□□ -0.42
DNMT1-203ENST00000540357 CHMP1BQ7LBR1 199 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms