RNA–Protein interactions for RNA: ENST00000540326.5

NEK6-213, Transcript of NIMA related kinase 6, humanhuman

TSL 1 (best) BASIC

Gene NEK6, Length 2,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-213ENST00000540326 MAPK9P45984 424 aa11.84□□□□□ -0.51
NEK6-213ENST00000540326 RAET1GQ6H3X3 334 aa11.84□□□□□ -0.51
NEK6-213ENST00000540326 ZNF547Q8IVP9 402 aa11.84□□□□□ -0.51
NEK6-213ENST00000540326 SCAIQ8N9R8 606 aa11.84□□□□□ -0.51
NEK6-213ENST00000540326 FAM46DQ8NEK8 389 aa11.84□□□□□ -0.51
NEK6-213ENST00000540326 YME1L1Q96TA2 773 aa11.84□□□□□ -0.51
NEK6-213ENST00000540326 WFDC6Q9BQY6 131 aa11.84□□□□□ -0.51
NEK6-213ENST00000540326 SIAEQ9HAT2 523 aa11.84□□□□□ -0.51
NEK6-213ENST00000540326 DNAH14Q0VDD8 3507 aa11.84□□□□□ -0.51
NEK6-213ENST00000540326 SH3D21A4FU49 640 aa11.83□□□□□ -0.52
NEK6-213ENST00000540326 LOC110117498-PIK3R3F6TDL0 507 aa11.83□□□□□ -0.52
NEK6-213ENST00000540326 RGS5O15539 181 aa11.83□□□□□ -0.52
NEK6-213ENST00000540326 ASNA1O43681 348 aa11.83□□□□□ -0.52
NEK6-213ENST00000540326 OR10H3O60404 316 aa11.83□□□□□ -0.52
NEK6-213ENST00000540326 CYP7B1O75881 506 aa11.83□□□□□ -0.52
NEK6-213ENST00000540326 OXSR1O95747 527 aaPredicted RBP11.83□□□□□ -0.52
NEK6-213ENST00000540326 UQCRC2P22695 453 aa11.83□□□□□ -0.52
NEK6-213ENST00000540326 PCYT1AP49585 367 aa11.83□□□□□ -0.52
NEK6-213ENST00000540326 HSPB3Q12988 150 aa11.83□□□□□ -0.52
NEK6-213ENST00000540326 LRIT3Q3SXY7 679 aa11.83□□□□□ -0.52
NEK6-213ENST00000540326 DEF8Q6ZN54 512 aa11.83□□□□□ -0.52
NEK6-213ENST00000540326 SLC7A5P1Q8MH63 180 aa11.83□□□□□ -0.52
NEK6-213ENST00000540326 SLC34A3Q8N130 599 aa11.83□□□□□ -0.52
NEK6-213ENST00000540326 CELF5Q8N6W0 485 aaKnown RBP11.83□□□□□ -0.52
NEK6-213ENST00000540326 C9orf43Q8TAL5 461 aaPredicted RBP11.83□□□□□ -0.52
NEK6-213ENST00000540326 C17orf50Q8WW18 174 aa11.83□□□□□ -0.52
NEK6-213ENST00000540326 DTD2Q96FN9 168 aa11.83□□□□□ -0.52
NEK6-213ENST00000540326 TMEM19Q96HH6 336 aa11.83□□□□□ -0.52
NEK6-213ENST00000540326 CAPNS2Q96L46 248 aa11.83□□□□□ -0.52
NEK6-213ENST00000540326 OPALINQ96PE5 141 aa11.83□□□□□ -0.52
NEK6-213ENST00000540326 SDHCQ99643 169 aaPredicted RBP11.83□□□□□ -0.52
NEK6-213ENST00000540326 CNOT2Q9NZN8 540 aaKnown RBP11.83□□□□□ -0.52
NEK6-213ENST00000540326 CFL2Q9Y281 166 aa11.83□□□□□ -0.52
NEK6-213ENST00000540326 MTCL1Q9Y4B5 1905 aaKnown RBP11.83□□□□□ -0.52
NEK6-213ENST00000540326 TLR4O00206 839 aa11.83□□□□□ -0.52
NEK6-213ENST00000540326 PLPP1O14494 284 aa11.83□□□□□ -0.52
NEK6-213ENST00000540326 ZNF24P17028 368 aa11.83□□□□□ -0.52
NEK6-213ENST00000540326 RCVRNP35243 200 aa11.83□□□□□ -0.52
NEK6-213ENST00000540326 OPRD1P41143 372 aa11.83□□□□□ -0.52
NEK6-213ENST00000540326 NR4A2P43354 598 aa11.83□□□□□ -0.52
NEK6-213ENST00000540326 MANFP55145 182 aaKnown RBP11.83□□□□□ -0.52
NEK6-213ENST00000540326 UAP1L1Q3KQV9 507 aa11.83□□□□□ -0.52
NEK6-213ENST00000540326 TIMM50Q3ZCQ8 353 aa11.83□□□□□ -0.52
NEK6-213ENST00000540326 C19orf48Q6RUI8 117 aa11.83□□□□□ -0.52
NEK6-213ENST00000540326 SLC39A5Q6ZMH5 540 aa11.83□□□□□ -0.52
NEK6-213ENST00000540326 ANKRD33Q7Z3H0 272 aa11.83□□□□□ -0.52
NEK6-213ENST00000540326 ADGRF3Q8IZF5 1079 aa11.83□□□□□ -0.52
NEK6-213ENST00000540326 Q8N9G6 341 aaPredicted RBP11.83□□□□□ -0.52
NEK6-213ENST00000540326 FBXO15Q8NCQ5 510 aaPredicted RBP11.83□□□□□ -0.52
NEK6-213ENST00000540326 GPR32P1Q8NGA4 272 aa11.83□□□□□ -0.52
NEK6-213ENST00000540326 OR5AR1Q8NGP9 310 aa11.83□□□□□ -0.52
NEK6-213ENST00000540326 APOBEC4Q8WW27 367 aaKnown RBP11.83□□□□□ -0.52
NEK6-213ENST00000540326 PDXPQ96GD0 296 aa11.83□□□□□ -0.52
NEK6-213ENST00000540326 CEP19Q96LK0 163 aa11.83□□□□□ -0.52
NEK6-213ENST00000540326 HHATLQ9HCP6 504 aa11.83□□□□□ -0.52
NEK6-213ENST00000540326 ENOPH1Q9UHY7 261 aa11.83□□□□□ -0.52
NEK6-213ENST00000540326 KCND3Q9UK17 655 aa11.83□□□□□ -0.52
NEK6-213ENST00000540326 MKLN1Q9UL63 735 aa11.83□□□□□ -0.52
NEK6-213ENST00000540326 TMCC3Q9ULS5 477 aa11.83□□□□□ -0.52
NEK6-213ENST00000540326 ASF1AQ9Y294 204 aa11.83□□□□□ -0.52
NEK6-213ENST00000540326 PCYT1BQ9Y5K3 369 aaPredicted RBP11.83□□□□□ -0.52
NEK6-213ENST00000540326 PSMD11O00231 422 aa11.82□□□□□ -0.52
NEK6-213ENST00000540326 WWP2O00308 870 aa11.82□□□□□ -0.52
NEK6-213ENST00000540326 MPZL2O60487 215 aa11.82□□□□□ -0.52
NEK6-213ENST00000540326 TPST2O60704 377 aa11.82□□□□□ -0.52
NEK6-213ENST00000540326 MOSPD3O75425 235 aa11.82□□□□□ -0.52
NEK6-213ENST00000540326 POP7O75817 140 aaKnown RBP11.82□□□□□ -0.52
NEK6-213ENST00000540326 TBX6O95947 436 aaPredicted RBP11.82□□□□□ -0.52
NEK6-213ENST00000540326 RPS19P39019 145 aaKnown RBP11.82□□□□□ -0.52
NEK6-213ENST00000540326 SLC15A1P46059 708 aa11.82□□□□□ -0.52
NEK6-213ENST00000540326 GPR1P46091 355 aa11.82□□□□□ -0.52
NEK6-213ENST00000540326 TGM4P49221 684 aa11.82□□□□□ -0.52
NEK6-213ENST00000540326 NTHL1P78549 312 aa11.82□□□□□ -0.52
NEK6-213ENST00000540326 MESP2Q0VG99 397 aa11.82□□□□□ -0.52
NEK6-213ENST00000540326 PRAMEF14Q5SWL7 426 aa11.82□□□□□ -0.52
NEK6-213ENST00000540326 PRAMEF13Q5VWM6 474 aa11.82□□□□□ -0.52
NEK6-213ENST00000540326 TCTN3Q6NUS6 607 aa11.82□□□□□ -0.52
NEK6-213ENST00000540326 UNC5DQ6UXZ4 953 aa11.82□□□□□ -0.52
NEK6-213ENST00000540326 SLC9B2Q86UD5 537 aa11.82□□□□□ -0.52
NEK6-213ENST00000540326 CCDC190Q86UF4 302 aa11.82□□□□□ -0.52
NEK6-213ENST00000540326 MTERF3Q96E29 417 aa11.82□□□□□ -0.52
NEK6-213ENST00000540326 HHIPL1Q96JK4 782 aa11.82□□□□□ -0.52
NEK6-213ENST00000540326 ZSWIM3Q96MP5 696 aa11.82□□□□□ -0.52
NEK6-213ENST00000540326 F2RL3Q96RI0 385 aa11.82□□□□□ -0.52
NEK6-213ENST00000540326 TAPBPLQ9BX59 468 aa11.82□□□□□ -0.52
NEK6-213ENST00000540326 TPK1Q9H3S4 243 aa11.82□□□□□ -0.52
NEK6-213ENST00000540326 SPATA7Q9P0W8 599 aa11.82□□□□□ -0.52
NEK6-213ENST00000540326 REV1Q9UBZ9 1251 aa11.82□□□□□ -0.52
NEK6-213ENST00000540326 SNX11Q9Y5W9 270 aa11.82□□□□□ -0.52
NEK6-213ENST00000540326 DSPPQ9NZW4 1301 aa11.82□□□□□ -0.52
NEK6-213ENST00000540326 PNMA8CA0A1B0GUJ8 204 aa11.82□□□□□ -0.52
NEK6-213ENST00000540326 SPINT1O43278 529 aa11.82□□□□□ -0.52
NEK6-213ENST00000540326 ADH1AP07327 375 aa11.82□□□□□ -0.52
NEK6-213ENST00000540326 ELAVL4P26378 380 aaKnown RBP11.82□□□□□ -0.52
NEK6-213ENST00000540326 TNFSF8P32971 234 aa11.82□□□□□ -0.52
NEK6-213ENST00000540326 DGKGP49619 791 aa11.82□□□□□ -0.52
NEK6-213ENST00000540326 MAPK12P53778 367 aa11.82□□□□□ -0.52
NEK6-213ENST00000540326 SF3B4Q15427 424 aaKnown RBP eCLIP11.82□□□□□ -0.521e-7■■■■□ 25.6
NEK6-213ENST00000540326 ZNF362Q5T0B9 420 aaPredicted RBP11.82□□□□□ -0.52
NEK6-213ENST00000540326 FAM83HQ6ZRV2 1179 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms