RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 ASB4Q9Y574 426 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 CLDN16Q9Y5I7 305 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 TCRBV16S1A1N1A0A5B0 115 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 BLACEA4D250 179 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 ERVH48-1M5A8F1 160 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 MASP2O00187 686 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 PEX12O00623 359 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 KLF11O14901 512 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 PIP5K1BO14986 540 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 PROM1O43490 865 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 PRMT3O60678 531 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 B4GALT2O60909 372 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 SNNO75324 88 aaPredicted RBP6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 SKAP2O75563 359 aaPredicted RBP6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 PRKRAO75569 313 aaKnown RBP6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 DNAJB5O75953 348 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 AIFM1O95831 613 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 CHEK2O96017 543 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 HPP00738 406 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 JUNP05412 331 aaKnown RBP6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 KLK1P06870 262 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 FAM58BPP0C7Q3 252 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 NR2F6P10588 404 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 NEFHP12036 1026 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 CPN2P22792 545 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 TIA1P31483 386 aaKnown RBP eCLIP6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 BUD31P41223 144 aaPredicted RBP6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 RRADP55042 308 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 POLE2P56282 527 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 HSD17B7P56937 341 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 PPP2R2AP63151 447 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 RAE1P78406 368 aaKnown RBP6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 BTG2P78543 158 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 IGLV3-21P80748 117 aaPredicted RBP6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 EEF1A2Q05639 463 aaKnown RBP6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 ACSM2AQ08AH3 577 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 CHAF1BQ13112 559 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 STX3Q13277 289 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 SLAMF1Q13291 335 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 PCOLCEQ15113 449 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 NSDHLQ15738 373 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 IMPG1Q17R60 797 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 LINC00303Q3SY05 128 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 DCAF10Q5QP82 559 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 ACSM2BQ68CK6 577 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 C18orf63Q68DL7 685 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 GALNT18Q6P9A2 607 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 CYP20A1Q6UW02 462 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 PCSK4Q6UW60 755 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 Q6ZSR9 355 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 PAGE2Q7Z2X7 111 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 ANKRD37Q7Z713 158 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 GPR180Q86V85 440 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 CLYBLQ8N0X4 340 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 TMEM102Q8N9M5 508 aaPredicted RBP6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 PLPP5Q8NEB5 264 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 APOBEC4Q8WW27 367 aaKnown RBP6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 METTL21AQ8WXB1 218 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 APIPQ96GX9 242 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 WDR77Q9BQA1 342 aaPredicted RBP6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 ZNF700Q9H0M5 742 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 ING2Q9H160 280 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 NECTIN3Q9NQS3 549 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 PRTFDC1Q9NRG1 225 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 SIRT5Q9NXA8 310 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 MS4A12Q9NXJ0 267 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 AHSPQ9NZD4 102 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 C19orf25Q9UFG5 118 aaPredicted RBP6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 MCM8Q9UJA3 840 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 RAP2CQ9Y3L5 183 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 TRAF6Q9Y4K3 522 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 SPACA6W5XKT8 324 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 EXPH5Q8NEV8 1989 aa6.55□□□□□ -1.36
LPCAT3-209ENST00000540060 CROCCQ5TZA2 2017 aa6.54□□□□□ -1.36
LPCAT3-209ENST00000540060 PRRC2CQ9Y520 2896 aaKnown RBP6.54□□□□□ -1.36
LPCAT3-209ENST00000540060 IGHV3-20A0A0C4DH32 117 aa6.54□□□□□ -1.36
LPCAT3-209ENST00000540060 A0A1W2PR48 441 aa6.54□□□□□ -1.36
LPCAT3-209ENST00000540060 ARHGAP10A1A4S6 786 aa6.54□□□□□ -1.36
LPCAT3-209ENST00000540060 SYNDIG1LA6NDD5 238 aa6.54□□□□□ -1.36
LPCAT3-209ENST00000540060 SLC28A1O00337 649 aa6.54□□□□□ -1.36
LPCAT3-209ENST00000540060 CLDN4O14493 209 aa6.54□□□□□ -1.36
LPCAT3-209ENST00000540060 LSM1O15116 133 aaKnown RBP6.54□□□□□ -1.36
LPCAT3-209ENST00000540060 ATP8B1O43520 1251 aa6.54□□□□□ -1.36
LPCAT3-209ENST00000540060 RGS14O43566 566 aa6.54□□□□□ -1.36
LPCAT3-209ENST00000540060 PCDH7O60245 1069 aa6.54□□□□□ -1.36
LPCAT3-209ENST00000540060 FGF17O60258 216 aa6.54□□□□□ -1.36
LPCAT3-209ENST00000540060 CTNSO60931 367 aa6.54□□□□□ -1.36
LPCAT3-209ENST00000540060 LDB3O75112 727 aa6.54□□□□□ -1.36
LPCAT3-209ENST00000540060 CEACAM4O75871 244 aa6.54□□□□□ -1.36
LPCAT3-209ENST00000540060 SEC24DO94855 1032 aaPredicted RBP6.54□□□□□ -1.36
LPCAT3-209ENST00000540060 LINC00032P0C843 101 aa6.54□□□□□ -1.36
LPCAT3-209ENST00000540060 NR1D1P20393 614 aa6.54□□□□□ -1.36
LPCAT3-209ENST00000540060 MAPK12P53778 367 aa6.54□□□□□ -1.36
LPCAT3-209ENST00000540060 SOX8P57073 446 aa6.54□□□□□ -1.36
LPCAT3-209ENST00000540060 TRA2BP62995 288 aaKnown RBP6.54□□□□□ -1.36
LPCAT3-209ENST00000540060 RPL38P63173 70 aaKnown RBP6.54□□□□□ -1.36
LPCAT3-209ENST00000540060 OCRLQ01968 901 aa6.54□□□□□ -1.36
LPCAT3-209ENST00000540060 Q0VFX4 171 aa6.54□□□□□ -1.36
LPCAT3-209ENST00000540060 SLC13A2Q13183 592 aa6.54□□□□□ -1.36
LPCAT3-209ENST00000540060 KIAA0040Q15053 153 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms