RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 NUDT22Q9BRQ3 303 aa11.15□□□□□ -0.62
VTN-202ENST00000539746 SPATA5L1Q9BVQ7 753 aa11.15□□□□□ -0.62
VTN-202ENST00000539746 ZNF717Q9BY31 904 aaPredicted RBP11.15□□□□□ -0.62
VTN-202ENST00000539746 KLHL25Q9H0H3 589 aa11.15□□□□□ -0.62
VTN-202ENST00000539746 ALG2Q9H553 416 aa11.15□□□□□ -0.62
VTN-202ENST00000539746 CALML5Q9NZT1 146 aa11.15□□□□□ -0.62
VTN-202ENST00000539746 TMEM181Q9P2C4 612 aa11.15□□□□□ -0.62
VTN-202ENST00000539746 C19orf25Q9UFG5 118 aaPredicted RBP11.15□□□□□ -0.62
VTN-202ENST00000539746 NDOR1Q9UHB4 597 aa11.15□□□□□ -0.62
VTN-202ENST00000539746 GPN3Q9UHW5 284 aaPredicted RBP11.15□□□□□ -0.62
VTN-202ENST00000539746 FBXW2Q9UKT8 454 aa11.15□□□□□ -0.62
VTN-202ENST00000539746 PADI2Q9Y2J8 665 aa11.15□□□□□ -0.62
VTN-202ENST00000539746 KLHL20Q9Y2M5 609 aa11.15□□□□□ -0.62
VTN-202ENST00000539746 PCDH15Q96QU1 1955 aa11.15□□□□□ -0.62
VTN-202ENST00000539746 ANKRD12Q6UB98 2062 aa11.15□□□□□ -0.63
VTN-202ENST00000539746 LY6G6EA0A0G2JKS1 128 aa11.14□□□□□ -0.63
VTN-202ENST00000539746 OR10H2O60403 315 aa11.14□□□□□ -0.63
VTN-202ENST00000539746 CTNSO60931 367 aa11.14□□□□□ -0.63
VTN-202ENST00000539746 SCRG1O75711 98 aa11.14□□□□□ -0.63
VTN-202ENST00000539746 PDE9AO76083 593 aa11.14□□□□□ -0.63
VTN-202ENST00000539746 GPR75O95800 540 aa11.14□□□□□ -0.63
VTN-202ENST00000539746 AIFM1O95831 613 aa11.14□□□□□ -0.63
VTN-202ENST00000539746 AK1P00568 194 aa11.14□□□□□ -0.63
VTN-202ENST00000539746 SLC35E2P0CK97 266 aa11.14□□□□□ -0.63
VTN-202ENST00000539746 CD59P13987 128 aa11.14□□□□□ -0.63
VTN-202ENST00000539746 ALAS2P22557 587 aa11.14□□□□□ -0.63
VTN-202ENST00000539746 TACR1P25103 407 aa11.14□□□□□ -0.63
VTN-202ENST00000539746 CSF2RBP32927 897 aa11.14□□□□□ -0.63
VTN-202ENST00000539746 CPOXP36551 454 aa11.14□□□□□ -0.63
VTN-202ENST00000539746 FRKP42685 505 aaPredicted RBP11.14□□□□□ -0.63
VTN-202ENST00000539746 LSSP48449 732 aa11.14□□□□□ -0.63
VTN-202ENST00000539746 PRIM2P49643 509 aa11.14□□□□□ -0.63
VTN-202ENST00000539746 NCBP2P52298 156 aaKnown RBP eCLIP11.14□□□□□ -0.63
VTN-202ENST00000539746 DCDP81605 110 aaKnown RBP11.14□□□□□ -0.63
VTN-202ENST00000539746 SLC25A3Q00325 362 aa11.14□□□□□ -0.63
VTN-202ENST00000539746 TCF15Q12870 199 aa11.14□□□□□ -0.63
VTN-202ENST00000539746 SLC13A2Q13183 592 aa11.14□□□□□ -0.63
VTN-202ENST00000539746 TRIM25Q14258 630 aaKnown RBP11.14□□□□□ -0.63
VTN-202ENST00000539746 TRIP6Q15654 476 aaKnown RBP11.14□□□□□ -0.63
VTN-202ENST00000539746 CCDC6Q16204 474 aa11.14□□□□□ -0.63
VTN-202ENST00000539746 CYP51A1Q16850 503 aa11.14□□□□□ -0.63
VTN-202ENST00000539746 PERM1Q5SV97 790 aa11.14□□□□□ -0.63
VTN-202ENST00000539746 ATAD3BQ5T9A4 648 aa11.14□□□□□ -0.63
VTN-202ENST00000539746 STPG1Q5TH74 334 aa11.14□□□□□ -0.63
VTN-202ENST00000539746 OR4F3Q6IEY1 312 aa11.14□□□□□ -0.63
VTN-202ENST00000539746 RINLQ6ZS11 566 aa11.14□□□□□ -0.63
VTN-202ENST00000539746 UBE3DQ7Z6J8 389 aa11.14□□□□□ -0.63
VTN-202ENST00000539746 SLITRK4Q8IW52 837 aa11.14□□□□□ -0.63
VTN-202ENST00000539746 FAM20CQ8IXL6 584 aa11.14□□□□□ -0.63
VTN-202ENST00000539746 EID3Q8N140 333 aa11.14□□□□□ -0.63
VTN-202ENST00000539746 GALNT15Q8N3T1 639 aa11.14□□□□□ -0.63
VTN-202ENST00000539746 PRSS33Q8NF86 280 aa11.14□□□□□ -0.63
VTN-202ENST00000539746 OR2T12Q8NG77 320 aa11.14□□□□□ -0.63
VTN-202ENST00000539746 OR7A2PQ8NGA2 310 aa11.14□□□□□ -0.63
VTN-202ENST00000539746 PSMA8Q8TAA3 256 aa11.14□□□□□ -0.63
VTN-202ENST00000539746 GFM2Q969S9 779 aaKnown RBP11.14□□□□□ -0.63
VTN-202ENST00000539746 ZNF501Q96CX3 271 aaPredicted RBP11.14□□□□□ -0.63
VTN-202ENST00000539746 CLIP3Q96DZ5 547 aa11.14□□□□□ -0.63
VTN-202ENST00000539746 GPATCH1Q9BRR8 931 aaKnown RBP11.14□□□□□ -0.63
VTN-202ENST00000539746 DDA1Q9BW61 102 aa11.14□□□□□ -0.63
VTN-202ENST00000539746 VCX3BQ9H321 246 aa11.14□□□□□ -0.63
VTN-202ENST00000539746 FAM60AQ9NP50 221 aa11.14□□□□□ -0.63
VTN-202ENST00000539746 FAF1Q9UNN5 650 aaPredicted RBP11.14□□□□□ -0.63
VTN-202ENST00000539746 U3KQA8 63 aa11.14□□□□□ -0.63
VTN-202ENST00000539746 PCM1Q15154 2024 aa11.14□□□□□ -0.63
VTN-202ENST00000539746 A0A087WV62 115 aa11.13□□□□□ -0.63
VTN-202ENST00000539746 CCDC187A0A096LP49 1063 aa11.13□□□□□ -0.63
VTN-202ENST00000539746 A0A1W2PQM1 296 aa11.13□□□□□ -0.63
VTN-202ENST00000539746 C4orf47A7E2U8 309 aa11.13□□□□□ -0.63
VTN-202ENST00000539746 A8MU76 341 aa11.13□□□□□ -0.63
VTN-202ENST00000539746 MYO1GB0I1T2 1018 aa11.13□□□□□ -0.63
VTN-202ENST00000539746 C5orf58C9J3I9 102 aa11.13□□□□□ -0.63
VTN-202ENST00000539746 CLIC1O00299 241 aa11.13□□□□□ -0.63
VTN-202ENST00000539746 RTCAO00442 366 aaKnown RBP11.13□□□□□ -0.63
VTN-202ENST00000539746 FBP2O00757 339 aa11.13□□□□□ -0.63
VTN-202ENST00000539746 CDX4O14627 284 aaPredicted RBP11.13□□□□□ -0.63
VTN-202ENST00000539746 ASNA1O43681 348 aa11.13□□□□□ -0.63
VTN-202ENST00000539746 KIF1CO43896 1103 aaKnown RBP11.13□□□□□ -0.63
VTN-202ENST00000539746 TMPRSS11DO60235 418 aa11.13□□□□□ -0.63
VTN-202ENST00000539746 ERAL1O75616 437 aaKnown RBP11.13□□□□□ -0.63
VTN-202ENST00000539746 IGHEP01854 428 aa11.13□□□□□ -0.63
VTN-202ENST00000539746 ATP1B1P05026 303 aa11.13□□□□□ -0.63
VTN-202ENST00000539746 CCNYL3P0C7X3 344 aa11.13□□□□□ -0.63
VTN-202ENST00000539746 JMJD7P0C870 316 aa11.13□□□□□ -0.63
VTN-202ENST00000539746 UMPSP11172 480 aa11.13□□□□□ -0.63
VTN-202ENST00000539746 LAMP1P11279 417 aa11.13□□□□□ -0.63
VTN-202ENST00000539746 FCGR1AP12314 374 aa11.13□□□□□ -0.63
VTN-202ENST00000539746 IL1RNP18510 177 aa11.13□□□□□ -0.63
VTN-202ENST00000539746 CD82P27701 267 aa11.13□□□□□ -0.63
VTN-202ENST00000539746 HTR1EP28566 365 aa11.13□□□□□ -0.63
VTN-202ENST00000539746 SOAT1P35610 550 aa11.13□□□□□ -0.63
VTN-202ENST00000539746 GABRA4P48169 554 aa11.13□□□□□ -0.63
VTN-202ENST00000539746 KHKP50053 298 aa11.13□□□□□ -0.63
VTN-202ENST00000539746 SLC7A2P52569 658 aa11.13□□□□□ -0.63
VTN-202ENST00000539746 DGKQP52824 942 aa11.13□□□□□ -0.63
VTN-202ENST00000539746 HPCAP84074 193 aa11.13□□□□□ -0.63
VTN-202ENST00000539746 MC2RQ01718 297 aa11.13□□□□□ -0.63
VTN-202ENST00000539746 RIPK1Q13546 671 aa11.13□□□□□ -0.63
VTN-202ENST00000539746 VEZF1Q14119 521 aa11.13□□□□□ -0.63
VTN-202ENST00000539746 FLOT2Q14254 428 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms