RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 ID2Q02363 134 aa11.93□□□□□ -0.5
TSPAN9-207ENST00000539631 KIAA0040Q15053 153 aa11.93□□□□□ -0.5
TSPAN9-207ENST00000539631 NR6A1Q15406 480 aa11.93□□□□□ -0.5
TSPAN9-207ENST00000539631 PDCD2Q16342 344 aaPredicted RBP11.93□□□□□ -0.5
TSPAN9-207ENST00000539631 SFT2D3Q587I9 215 aa11.93□□□□□ -0.5
TSPAN9-207ENST00000539631 HSP90B2PQ58FF3 399 aa11.93□□□□□ -0.5
TSPAN9-207ENST00000539631 XKR7Q5GH72 579 aa11.93□□□□□ -0.5
TSPAN9-207ENST00000539631 DCAF10Q5QP82 559 aa11.93□□□□□ -0.5
TSPAN9-207ENST00000539631 HOMEZQ8IX15 550 aa11.93□□□□□ -0.5
TSPAN9-207ENST00000539631 TMEM102Q8N9M5 508 aaPredicted RBP11.93□□□□□ -0.5
TSPAN9-207ENST00000539631 APOBEC4Q8WW27 367 aaKnown RBP11.93□□□□□ -0.5
TSPAN9-207ENST00000539631 ANKRD9Q96BM1 317 aaPredicted RBP11.93□□□□□ -0.5
TSPAN9-207ENST00000539631 TM4SF18Q96CE8 201 aa11.93□□□□□ -0.5
TSPAN9-207ENST00000539631 C11orf24Q96F05 449 aaPredicted RBP11.93□□□□□ -0.5
TSPAN9-207ENST00000539631 PPP1R36Q96LQ0 422 aa11.93□□□□□ -0.5
TSPAN9-207ENST00000539631 FER1L6-AS2Q96M78 137 aa11.93□□□□□ -0.5
TSPAN9-207ENST00000539631 WDR77Q9BQA1 342 aaPredicted RBP11.93□□□□□ -0.5
TSPAN9-207ENST00000539631 ZNF700Q9H0M5 742 aa11.93□□□□□ -0.5
TSPAN9-207ENST00000539631 ING2Q9H160 280 aa11.93□□□□□ -0.5
TSPAN9-207ENST00000539631 RPF2Q9H7B2 306 aaKnown RBP11.93□□□□□ -0.5
TSPAN9-207ENST00000539631 LRTM1Q9HBL6 345 aa11.93□□□□□ -0.5
TSPAN9-207ENST00000539631 ZNF160Q9HCG1 818 aa11.93□□□□□ -0.5
TSPAN9-207ENST00000539631 C1orf109Q9NX04 203 aa11.93□□□□□ -0.5
TSPAN9-207ENST00000539631 SIRT5Q9NXA8 310 aa11.93□□□□□ -0.5
TSPAN9-207ENST00000539631 C19orf25Q9UFG5 118 aaPredicted RBP11.93□□□□□ -0.5
TSPAN9-207ENST00000539631 GIMAP2Q9UG22 337 aa11.93□□□□□ -0.5
TSPAN9-207ENST00000539631 POLR3HQ9Y535 204 aaPredicted RBP11.93□□□□□ -0.5
TSPAN9-207ENST00000539631 LOC400499M0QZD8 3231 aa11.92□□□□□ -0.5
TSPAN9-207ENST00000539631 NSG1A0A0A6YYJ2 146 aa11.92□□□□□ -0.5
TSPAN9-207ENST00000539631 ATP6AP2A0A1C7CYW4 349 aa11.92□□□□□ -0.5
TSPAN9-207ENST00000539631 GNG14A0A1W2PPG7 69 aa11.92□□□□□ -0.5
TSPAN9-207ENST00000539631 A0A1W2PQ72 361 aa11.92□□□□□ -0.5
TSPAN9-207ENST00000539631 TCRBV16S1A1N1A0A5B0 115 aa11.92□□□□□ -0.5
TSPAN9-207ENST00000539631 BLACEA4D250 179 aa11.92□□□□□ -0.5
TSPAN9-207ENST00000539631 GLOD5A6NK44 160 aa11.92□□□□□ -0.5
TSPAN9-207ENST00000539631 A8MUA0 341 aa11.92□□□□□ -0.5
TSPAN9-207ENST00000539631 DYNC1I1O14576 645 aa11.92□□□□□ -0.5
TSPAN9-207ENST00000539631 LSM1O15116 133 aaKnown RBP11.92□□□□□ -0.5
TSPAN9-207ENST00000539631 PGRMC2O15173 223 aa11.92□□□□□ -0.5
TSPAN9-207ENST00000539631 FGF17O60258 216 aa11.92□□□□□ -0.5
TSPAN9-207ENST00000539631 ATP6AP2O75787 350 aa11.92□□□□□ -0.5
TSPAN9-207ENST00000539631 SEC24DO94855 1032 aaPredicted RBP11.92□□□□□ -0.5
TSPAN9-207ENST00000539631 NR2F6P10588 404 aa11.92□□□□□ -0.5
TSPAN9-207ENST00000539631 PPP2R1BP30154 601 aa11.92□□□□□ -0.5
TSPAN9-207ENST00000539631 CCL11P51671 97 aa11.92□□□□□ -0.5
TSPAN9-207ENST00000539631 RRADP55042 308 aa11.92□□□□□ -0.5
TSPAN9-207ENST00000539631 TRA2BP62995 288 aaKnown RBP11.92□□□□□ -0.5
TSPAN9-207ENST00000539631 OCRLQ01968 901 aa11.92□□□□□ -0.5
TSPAN9-207ENST00000539631 RHDQ02161 417 aa11.92□□□□□ -0.5
TSPAN9-207ENST00000539631 ACTN3Q08043 901 aaPredicted RBP11.92□□□□□ -0.5
TSPAN9-207ENST00000539631 GALNTL6Q49A17 601 aa11.92□□□□□ -0.5
TSPAN9-207ENST00000539631 NDUFAF5Q5TEU4 345 aa11.92□□□□□ -0.5
TSPAN9-207ENST00000539631 NOXRED1Q6NXP6 359 aa11.92□□□□□ -0.5
TSPAN9-207ENST00000539631 GALNT18Q6P9A2 607 aa11.92□□□□□ -0.5
TSPAN9-207ENST00000539631 NDUFAF7Q7L592 441 aa11.92□□□□□ -0.5
TSPAN9-207ENST00000539631 APLFQ8IW19 511 aaPredicted RBP11.92□□□□□ -0.5
TSPAN9-207ENST00000539631 OR4N5Q8IXE1 308 aa11.92□□□□□ -0.5
TSPAN9-207ENST00000539631 PARP9Q8IXQ6 854 aa11.92□□□□□ -0.5
TSPAN9-207ENST00000539631 MMP21Q8N119 569 aa11.92□□□□□ -0.5
TSPAN9-207ENST00000539631 LRRC8CQ8TDW0 803 aa11.92□□□□□ -0.5
TSPAN9-207ENST00000539631 C16orf78Q8WTQ4 265 aa11.92□□□□□ -0.5
TSPAN9-207ENST00000539631 C19orf60Q96EN9 201 aa11.92□□□□□ -0.5
TSPAN9-207ENST00000539631 VPS50Q96JG6 964 aa11.92□□□□□ -0.5
TSPAN9-207ENST00000539631 WDR41Q9HAD4 459 aa11.92□□□□□ -0.5
TSPAN9-207ENST00000539631 MED4Q9NPJ6 270 aa11.92□□□□□ -0.5
TSPAN9-207ENST00000539631 MED13Q9UHV7 2174 aa11.91□□□□□ -0.5
TSPAN9-207ENST00000539631 PTPRQQ9UMZ3 2332 aa11.91□□□□□ -0.5
TSPAN9-207ENST00000539631 TNRC6AQ8NDV7 1962 aaKnown RBP11.91□□□□□ -0.5
TSPAN9-207ENST00000539631 A6NL46 340 aa11.91□□□□□ -0.5
TSPAN9-207ENST00000539631 PEX11AO75192 247 aa11.91□□□□□ -0.5
TSPAN9-207ENST00000539631 GUCY1B2O75343 617 aa11.91□□□□□ -0.5
TSPAN9-207ENST00000539631 MYO1DO94832 1006 aa11.91□□□□□ -0.5
TSPAN9-207ENST00000539631 CELA2AP08217 269 aa11.91□□□□□ -0.5
TSPAN9-207ENST00000539631 IL3P08700 152 aa11.91□□□□□ -0.5
TSPAN9-207ENST00000539631 ANXA4P09525 319 aaPredicted RBP11.91□□□□□ -0.5
TSPAN9-207ENST00000539631 KITP10721 976 aa11.91□□□□□ -0.5
TSPAN9-207ENST00000539631 POLE2P56282 527 aa11.91□□□□□ -0.5
TSPAN9-207ENST00000539631 TAS2R50P59544 299 aa11.91□□□□□ -0.5
TSPAN9-207ENST00000539631 RPL38P63173 70 aaKnown RBP11.91□□□□□ -0.5
TSPAN9-207ENST00000539631 FOLH1Q04609 750 aa11.91□□□□□ -0.5
TSPAN9-207ENST00000539631 Q0VFX4 171 aa11.91□□□□□ -0.5
TSPAN9-207ENST00000539631 STX4Q12846 297 aa11.91□□□□□ -0.5
TSPAN9-207ENST00000539631 RFTN2Q52LD8 501 aaPredicted RBP11.91□□□□□ -0.5
TSPAN9-207ENST00000539631 PAPD4Q6PIY7 484 aaKnown RBP11.91□□□□□ -0.5
TSPAN9-207ENST00000539631 KIRREL3Q8IZU9 778 aa11.91□□□□□ -0.5
TSPAN9-207ENST00000539631 FAM76AQ8TAV0 307 aa11.91□□□□□ -0.5
TSPAN9-207ENST00000539631 DNAJB14Q8TBM8 379 aa11.91□□□□□ -0.5
TSPAN9-207ENST00000539631 CKAP2Q8WWK9 683 aa11.91□□□□□ -0.5
TSPAN9-207ENST00000539631 TANKQ92844 425 aa11.91□□□□□ -0.5
TSPAN9-207ENST00000539631 METTL2AQ96IZ6 378 aaKnown RBP11.91□□□□□ -0.5
TSPAN9-207ENST00000539631 FCRL1Q96LA6 429 aa11.91□□□□□ -0.5
TSPAN9-207ENST00000539631 IMMP1LQ96LU5 166 aa11.91□□□□□ -0.5
TSPAN9-207ENST00000539631 ARHGAP9Q9BRR9 750 aa11.91□□□□□ -0.5
TSPAN9-207ENST00000539631 ALOXE3Q9BYJ1 711 aa11.91□□□□□ -0.5
TSPAN9-207ENST00000539631 NUF2Q9BZD4 464 aa11.91□□□□□ -0.5
TSPAN9-207ENST00000539631 ATP13A2Q9NQ11 1180 aa11.91□□□□□ -0.5
TSPAN9-207ENST00000539631 PNO1Q9NRX1 252 aaKnown RBP11.91□□□□□ -0.5
TSPAN9-207ENST00000539631 RIC8BQ9NVN3 520 aa11.91□□□□□ -0.5
TSPAN9-207ENST00000539631 HEY2Q9UBP5 337 aa11.91□□□□□ -0.5
TSPAN9-207ENST00000539631 MARCOQ9UEW3 520 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms