RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 TNFRSF1BP20333 461 aa13.87□□□□□ -0.19
CDCA3-207ENST00000538862 PBLDP30039 288 aaPredicted RBP13.87□□□□□ -0.19
CDCA3-207ENST00000538862 CHI3L1P36222 383 aaPredicted RBP13.87□□□□□ -0.19
CDCA3-207ENST00000538862 XCR1P46094 333 aa13.87□□□□□ -0.19
CDCA3-207ENST00000538862 OR1E2P47887 323 aa13.87□□□□□ -0.19
CDCA3-207ENST00000538862 PCBP3P57721 371 aaKnown RBP13.87□□□□□ -0.19
CDCA3-207ENST00000538862 ZNF77Q15935 545 aa13.87□□□□□ -0.19
CDCA3-207ENST00000538862 IKBIPQ70UQ0 350 aa13.87□□□□□ -0.19
CDCA3-207ENST00000538862 CFAP206Q8IYR0 622 aa13.87□□□□□ -0.19
CDCA3-207ENST00000538862 SETD7Q8WTS6 366 aaKnown RBP13.87□□□□□ -0.19
CDCA3-207ENST00000538862 DTD2Q96FN9 168 aa13.87□□□□□ -0.19
CDCA3-207ENST00000538862 COQ10AQ96MF6 247 aa13.87□□□□□ -0.19
CDCA3-207ENST00000538862 NIPSNAP1Q9BPW8 284 aa13.87□□□□□ -0.19
CDCA3-207ENST00000538862 FOXQ1Q9C009 403 aa13.87□□□□□ -0.19
CDCA3-207ENST00000538862 ACER3Q9NUN7 267 aa13.87□□□□□ -0.19
CDCA3-207ENST00000538862 ANGPT4Q9Y264 503 aa13.87□□□□□ -0.19
CDCA3-207ENST00000538862 FAM32AQ9Y421 112 aaKnown RBP13.87□□□□□ -0.19
CDCA3-207ENST00000538862 COL4A2P08572 1712 aa13.87□□□□□ -0.19
CDCA3-207ENST00000538862 A0A1W2PRB8 838 aa13.86□□□□□ -0.19
CDCA3-207ENST00000538862 LILRB5O75023 590 aa13.86□□□□□ -0.19
CDCA3-207ENST00000538862 RPLP0P05388 317 aaKnown RBP13.86□□□□□ -0.19
CDCA3-207ENST00000538862 ARAFP10398 606 aa13.86□□□□□ -0.19
CDCA3-207ENST00000538862 RHCEP18577 417 aa13.86□□□□□ -0.19
CDCA3-207ENST00000538862 IDH2P48735 452 aaKnown RBP13.86□□□□□ -0.19
CDCA3-207ENST00000538862 TAS2R50P59544 299 aa13.86□□□□□ -0.19
CDCA3-207ENST00000538862 OLR1P78380 273 aa13.86□□□□□ -0.19
CDCA3-207ENST00000538862 MC1RQ01726 317 aa13.86□□□□□ -0.19
CDCA3-207ENST00000538862 TAP2Q03519 686 aa13.86□□□□□ -0.19
CDCA3-207ENST00000538862 IRF3Q14653 427 aa13.86□□□□□ -0.19
CDCA3-207ENST00000538862 MLF2Q15773 248 aaPredicted RBP13.86□□□□□ -0.19
CDCA3-207ENST00000538862 SLC5A12Q1EHB4 618 aa13.86□□□□□ -0.19
CDCA3-207ENST00000538862 RNF130Q86XS8 419 aa13.86□□□□□ -0.19
CDCA3-207ENST00000538862 AMER2Q8N7J2 671 aa13.86□□□□□ -0.19
CDCA3-207ENST00000538862 OR52J3Q8NH60 311 aa13.86□□□□□ -0.19
CDCA3-207ENST00000538862 WDR48Q8TAF3 677 aa13.86□□□□□ -0.19
CDCA3-207ENST00000538862 C9orf43Q8TAL5 461 aaPredicted RBP13.86□□□□□ -0.19
CDCA3-207ENST00000538862 ZNF675Q8TD23 568 aa13.86□□□□□ -0.19
CDCA3-207ENST00000538862 CIDECQ96AQ7 238 aaPredicted RBP13.86□□□□□ -0.19
CDCA3-207ENST00000538862 MAPKAP1Q9BPZ7 522 aa13.86□□□□□ -0.19
CDCA3-207ENST00000538862 NXF2Q9GZY0 626 aaKnown RBP13.86□□□□□ -0.19
CDCA3-207ENST00000538862 OR51B5Q9H339 312 aa13.86□□□□□ -0.19
CDCA3-207ENST00000538862 PNMA8BQ9ULN7 279 aaPredicted RBP13.86□□□□□ -0.19
CDCA3-207ENST00000538862 ICKQ9UPZ9 632 aa13.86□□□□□ -0.19
CDCA3-207ENST00000538862 UGT2A1Q9Y4X1 527 aa13.86□□□□□ -0.19
CDCA3-207ENST00000538862 ENPP4Q9Y6X5 453 aa13.86□□□□□ -0.19
CDCA3-207ENST00000538862 C17orf113A0A1B0GUU1 675 aa13.86□□□□□ -0.19
CDCA3-207ENST00000538862 SH3D21A4FU49 640 aa13.86□□□□□ -0.19
CDCA3-207ENST00000538862 SAGE2PA6NJ88 616 aa13.86□□□□□ -0.19
CDCA3-207ENST00000538862 PLK4O00444 970 aa13.86□□□□□ -0.19
CDCA3-207ENST00000538862 MPZL2O60487 215 aa13.86□□□□□ -0.19
CDCA3-207ENST00000538862 GBAP04062 536 aa13.86□□□□□ -0.19
CDCA3-207ENST00000538862 EIF2DP41214 584 aaKnown RBP13.86□□□□□ -0.19
CDCA3-207ENST00000538862 GSSP48637 474 aa13.86□□□□□ -0.19
CDCA3-207ENST00000538862 CASP9P55211 416 aa13.86□□□□□ -0.19
CDCA3-207ENST00000538862 STARD3Q14849 445 aa13.86□□□□□ -0.19
CDCA3-207ENST00000538862 TOR1AIP1Q5JTV8 583 aa13.86□□□□□ -0.19
CDCA3-207ENST00000538862 PARS2Q7L3T8 475 aaKnown RBP13.86□□□□□ -0.19
CDCA3-207ENST00000538862 YAF2Q8IY57 180 aa13.86□□□□□ -0.19
CDCA3-207ENST00000538862 KBTBD8Q8NFY9 601 aa13.86□□□□□ -0.19
CDCA3-207ENST00000538862 PPP1R16AQ96I34 528 aa13.86□□□□□ -0.19
CDCA3-207ENST00000538862 ZNF514Q96K75 400 aaPredicted RBP13.86□□□□□ -0.19
CDCA3-207ENST00000538862 DHRS1Q96LJ7 313 aa13.86□□□□□ -0.19
CDCA3-207ENST00000538862 LINC00615Q96LM1 132 aaPredicted RBP13.86□□□□□ -0.19
CDCA3-207ENST00000538862 MTG2Q9H4K7 406 aa13.86□□□□□ -0.19
CDCA3-207ENST00000538862 ZBTB20Q9HC78 741 aaPredicted RBP13.86□□□□□ -0.19
CDCA3-207ENST00000538862 AMBNQ9NP70 447 aa13.86□□□□□ -0.19
CDCA3-207ENST00000538862 SH2B3Q9UQQ2 575 aa13.86□□□□□ -0.19
CDCA3-207ENST00000538862 MAP4K5Q9Y4K4 846 aa13.86□□□□□ -0.19
CDCA3-207ENST00000538862 UPK1BO75841 260 aa13.85□□□□□ -0.19
CDCA3-207ENST00000538862 CCNB2O95067 398 aa13.85□□□□□ -0.19
CDCA3-207ENST00000538862 SOD1P00441 154 aa13.85□□□□□ -0.19
CDCA3-207ENST00000538862 DCNP07585 359 aaKnown RBP13.85□□□□□ -0.19
CDCA3-207ENST00000538862 STSP08842 583 aa13.85□□□□□ -0.19
CDCA3-207ENST00000538862 CBLP22681 906 aa13.85□□□□□ -0.19
CDCA3-207ENST00000538862 UQCRC2P22695 453 aa13.85□□□□□ -0.19
CDCA3-207ENST00000538862 GADD45AP24522 165 aa13.85□□□□□ -0.19
CDCA3-207ENST00000538862 TGFBR1P36897 503 aa13.85□□□□□ -0.19
CDCA3-207ENST00000538862 ST3GAL4Q11206 333 aa13.85□□□□□ -0.19
CDCA3-207ENST00000538862 CDC20Q12834 499 aa13.85□□□□□ -0.19
CDCA3-207ENST00000538862 ZNF765Q7L2R6 523 aa13.85□□□□□ -0.19
CDCA3-207ENST00000538862 SNX29P2Q8IUI4 249 aa13.85□□□□□ -0.19
CDCA3-207ENST00000538862 CADM3Q8N126 398 aa13.85□□□□□ -0.19
CDCA3-207ENST00000538862 STX19Q8N4C7 294 aa13.85□□□□□ -0.19
CDCA3-207ENST00000538862 UTP15Q8TED0 518 aaKnown RBP13.85□□□□□ -0.19
CDCA3-207ENST00000538862 WRAP53Q9BUR4 548 aaKnown RBP13.85□□□□□ -0.19
CDCA3-207ENST00000538862 DPEP2Q9H4A9 486 aa13.85□□□□□ -0.19
CDCA3-207ENST00000538862 SP140LQ9H930 580 aa13.85□□□□□ -0.19
CDCA3-207ENST00000538862 CCDC177Q9NQR7 707 aaPredicted RBP13.85□□□□□ -0.19
CDCA3-207ENST00000538862 IMPAD1Q9NX62 359 aa13.85□□□□□ -0.19
CDCA3-207ENST00000538862 GPR83Q9NYM4 423 aa13.85□□□□□ -0.19
CDCA3-207ENST00000538862 CCDC59Q9P031 241 aaKnown RBP13.85□□□□□ -0.19
CDCA3-207ENST00000538862 KLK4Q9Y5K2 254 aa13.85□□□□□ -0.19
CDCA3-207ENST00000538862 MYO15AQ9UKN7 3530 aa13.84□□□□□ -0.19
CDCA3-207ENST00000538862 PRAMEF33A0A0G2JMD5 474 aa13.84□□□□□ -0.19
CDCA3-207ENST00000538862 EFCAB10A6NFE3 127 aa13.84□□□□□ -0.19
CDCA3-207ENST00000538862 SAP18O00422 153 aaKnown RBP13.84□□□□□ -0.19
CDCA3-207ENST00000538862 PCDH17O14917 1159 aa13.84□□□□□ -0.19
CDCA3-207ENST00000538862 PRAMEF10O60809 474 aa13.84□□□□□ -0.19
CDCA3-207ENST00000538862 GADD45GO95257 159 aa13.84□□□□□ -0.19
CDCA3-207ENST00000538862 KLK1P06870 262 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms