RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	NPAS2	Q99743	824 aa		11.49	□□□□□ -0.57
CLTCL1-205	ENST00000538828	ALOXE3	Q9BYJ1	711 aa		11.49	□□□□□ -0.57
CLTCL1-205	ENST00000538828	DEFB126	Q9BYW3	111 aa		11.49	□□□□□ -0.57
CLTCL1-205	ENST00000538828	ROPN1B	Q9BZX4	212 aa	Predicted RBP	11.49	□□□□□ -0.57
CLTCL1-205	ENST00000538828	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	11.49	□□□□□ -0.57
CLTCL1-205	ENST00000538828	ELOVL6	Q9H5J4	265 aa		11.49	□□□□□ -0.57
CLTCL1-205	ENST00000538828	RPF2	Q9H7B2	306 aa	Known RBP	11.49	□□□□□ -0.57
CLTCL1-205	ENST00000538828	WDR41	Q9HAD4	459 aa		11.49	□□□□□ -0.57
CLTCL1-205	ENST00000538828	ROPN1	Q9HAT0	212 aa	Predicted RBP	11.49	□□□□□ -0.57
CLTCL1-205	ENST00000538828	MKS1	Q9NXB0	559 aa		11.49	□□□□□ -0.57
CLTCL1-205	ENST00000538828	MID2	Q9UJV3	735 aa		11.49	□□□□□ -0.57
CLTCL1-205	ENST00000538828	NTNG1	Q9Y2I2	539 aa		11.49	□□□□□ -0.57
CLTCL1-205	ENST00000538828	ASB4	Q9Y574	426 aa		11.49	□□□□□ -0.57
CLTCL1-205	ENST00000538828	CLCA3P	Q9Y6N3	262 aa		11.49	□□□□□ -0.57
CLTCL1-205	ENST00000538828	SPEN	Q96T58	3664 aa	Known RBP	11.49	□□□□□ -0.57
CLTCL1-205	ENST00000538828	CCDC151	A5D8V7	595 aa		11.48	□□□□□ -0.57
CLTCL1-205	ENST00000538828	ASPDH	A6ND91	283 aa		11.48	□□□□□ -0.57
CLTCL1-205	ENST00000538828	GABRR3	A8MPY1	467 aa		11.48	□□□□□ -0.57
CLTCL1-205	ENST00000538828	TGFBR3L	H3BV60	316 aa		11.48	□□□□□ -0.57
CLTCL1-205	ENST00000538828	RTCA	O00442	366 aa	Known RBP	11.48	□□□□□ -0.57
CLTCL1-205	ENST00000538828	DYRK3	O43781	588 aa		11.48	□□□□□ -0.57
CLTCL1-205	ENST00000538828	MYO1D	O94832	1006 aa		11.48	□□□□□ -0.57
CLTCL1-205	ENST00000538828	RASAL1	O95294	804 aa		11.48	□□□□□ -0.57
CLTCL1-205	ENST00000538828	SLU7	O95391	586 aa	Known RBP	11.48	□□□□□ -0.57
CLTCL1-205	ENST00000538828	DDAH2	O95865	285 aa		11.48	□□□□□ -0.57
CLTCL1-205	ENST00000538828	KRT6A	P02538	564 aa		11.48	□□□□□ -0.57
CLTCL1-205	ENST00000538828	KRT6B	P04259	564 aa		11.48	□□□□□ -0.57
CLTCL1-205	ENST00000538828	ENO1	P06733	434 aa	Known RBP	11.48	□□□□□ -0.57
CLTCL1-205	ENST00000538828	COX7A2	P14406	83 aa		11.48	□□□□□ -0.57
CLTCL1-205	ENST00000538828	CD46	P15529	392 aa		11.48	□□□□□ -0.57
CLTCL1-205	ENST00000538828	GNLY	P22749	145 aa		11.48	□□□□□ -0.57
CLTCL1-205	ENST00000538828	CD96	P40200	585 aa		11.48	□□□□□ -0.57
CLTCL1-205	ENST00000538828	STT3A	P46977	705 aa		11.48	□□□□□ -0.57
CLTCL1-205	ENST00000538828	KRT6C	P48668	564 aa		11.48	□□□□□ -0.57
CLTCL1-205	ENST00000538828	HLCS	P50747	726 aa		11.48	□□□□□ -0.57
CLTCL1-205	ENST00000538828	DNAJB13	P59910	316 aa		11.48	□□□□□ -0.57
CLTCL1-205	ENST00000538828	TRA2B	P62995	288 aa	Known RBP	11.48	□□□□□ -0.57
CLTCL1-205	ENST00000538828	SLC18A2	Q05940	514 aa		11.48	□□□□□ -0.57
CLTCL1-205	ENST00000538828	DDX39B	Q13838	428 aa	Known RBP	11.48	□□□□□ -0.57
CLTCL1-205	ENST00000538828	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	11.48	□□□□□ -0.57
CLTCL1-205	ENST00000538828	UNC50	Q53HI1	259 aa		11.48	□□□□□ -0.57
CLTCL1-205	ENST00000538828	PRR30	Q53SZ7	412 aa	Predicted RBP	11.48	□□□□□ -0.57
CLTCL1-205	ENST00000538828	ZNF766	Q5HY98	468 aa		11.48	□□□□□ -0.57
CLTCL1-205	ENST00000538828	COLEC12	Q5KU26	742 aa		11.48	□□□□□ -0.57
CLTCL1-205	ENST00000538828	FHL5	Q5TD97	284 aa		11.48	□□□□□ -0.57
CLTCL1-205	ENST00000538828	TTC19	Q6DKK2	380 aa	Predicted RBP	11.48	□□□□□ -0.57
CLTCL1-205	ENST00000538828	ST13P4	Q8IZP2	240 aa	Predicted RBP	11.48	□□□□□ -0.57
CLTCL1-205	ENST00000538828	BEST3	Q8N1M1	668 aa		11.48	□□□□□ -0.57
CLTCL1-205	ENST00000538828	METTL4	Q8N3J2	472 aa		11.48	□□□□□ -0.57
CLTCL1-205	ENST00000538828	GBP7	Q8N8V2	638 aa	Predicted RBP	11.48	□□□□□ -0.57
CLTCL1-205	ENST00000538828	PTPMT1	Q8WUK0	201 aa	Predicted RBP	11.48	□□□□□ -0.57
CLTCL1-205	ENST00000538828	NR4A3	Q92570	626 aa		11.48	□□□□□ -0.57
CLTCL1-205	ENST00000538828	ANKRD9	Q96BM1	317 aa	Predicted RBP	11.48	□□□□□ -0.57
CLTCL1-205	ENST00000538828	C19orf60	Q96EN9	201 aa		11.48	□□□□□ -0.57
CLTCL1-205	ENST00000538828	NSUN5	Q96P11	429 aa	Known RBP	11.48	□□□□□ -0.57
CLTCL1-205	ENST00000538828	CDCP1	Q9H5V8	836 aa		11.48	□□□□□ -0.57
CLTCL1-205	ENST00000538828	SEMA4B	Q9NPR2	832 aa	Predicted RBP	11.48	□□□□□ -0.57
CLTCL1-205	ENST00000538828	PNO1	Q9NRX1	252 aa	Known RBP	11.48	□□□□□ -0.57
CLTCL1-205	ENST00000538828	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	11.48	□□□□□ -0.57
CLTCL1-205	ENST00000538828	PLA2G3	Q9NZ20	509 aa		11.48	□□□□□ -0.57
CLTCL1-205	ENST00000538828	LUZP4	Q9P127	313 aa		11.48	□□□□□ -0.57
CLTCL1-205	ENST00000538828	YARS2	Q9Y2Z4	477 aa	Known RBP	11.48	□□□□□ -0.57
CLTCL1-205	ENST00000538828	SETX	Q7Z333	2677 aa	Known RBP	11.48	□□□□□ -0.57
CLTCL1-205	ENST00000538828	HECTD1	Q9ULT8	2610 aa		11.47	□□□□□ -0.57
CLTCL1-205	ENST00000538828	ANKUB1	A6NFN9	424 aa		11.47	□□□□□ -0.57
CLTCL1-205	ENST00000538828	PYCARD-AS1	I3L0S3	204 aa		11.47	□□□□□ -0.57
CLTCL1-205	ENST00000538828	NEURL1	O76050	574 aa		11.47	□□□□□ -0.57
CLTCL1-205	ENST00000538828	SUPT7L	O94864	414 aa		11.47	□□□□□ -0.57
CLTCL1-205	ENST00000538828	FAM58BP	P0C7Q3	252 aa		11.47	□□□□□ -0.57
CLTCL1-205	ENST00000538828	ARL1	P40616	181 aa	Predicted RBP	11.47	□□□□□ -0.57
CLTCL1-205	ENST00000538828	GSTM5	P46439	218 aa		11.47	□□□□□ -0.57
CLTCL1-205	ENST00000538828	CYB561	P49447	251 aa		11.47	□□□□□ -0.57
CLTCL1-205	ENST00000538828	HNRNPH2	P55795	449 aa	Known RBP	11.47	□□□□□ -0.57
CLTCL1-205	ENST00000538828	PLIN5	Q00G26	463 aa		11.47	□□□□□ -0.57
CLTCL1-205	ENST00000538828	CSTF3	Q12996	717 aa	Known RBP	11.47	□□□□□ -0.57
CLTCL1-205	ENST00000538828	LCP2	Q13094	533 aa		11.47	□□□□□ -0.57
CLTCL1-205	ENST00000538828	ELOA	Q14241	798 aa	Known RBP	11.47	□□□□□ -0.57
CLTCL1-205	ENST00000538828	OR1C1	Q15619	314 aa		11.47	□□□□□ -0.57
CLTCL1-205	ENST00000538828	SPRED3	Q2MJR0	410 aa		11.47	□□□□□ -0.57
CLTCL1-205	ENST00000538828	LETMD1	Q6P1Q0	360 aa		11.47	□□□□□ -0.57
CLTCL1-205	ENST00000538828	CYP20A1	Q6UW02	462 aa		11.47	□□□□□ -0.57
CLTCL1-205	ENST00000538828	GSPT2	Q8IYD1	628 aa	Known RBP	11.47	□□□□□ -0.57
CLTCL1-205	ENST00000538828	MREG	Q8N565	214 aa		11.47	□□□□□ -0.57
CLTCL1-205	ENST00000538828	POGLUT1	Q8NBL1	392 aa		11.47	□□□□□ -0.57
CLTCL1-205	ENST00000538828	FAM98A	Q8NCA5	519 aa	Known RBP	11.47	□□□□□ -0.57
CLTCL1-205	ENST00000538828	OR5L2	Q8NGL0	311 aa		11.47	□□□□□ -0.57
CLTCL1-205	ENST00000538828	NUBPL	Q8TB37	319 aa		11.47	□□□□□ -0.57
CLTCL1-205	ENST00000538828	SELENOM	Q8WWX9	145 aa		11.47	□□□□□ -0.57
CLTCL1-205	ENST00000538828	CAVIN3	Q969G5	261 aa		11.47	□□□□□ -0.57
CLTCL1-205	ENST00000538828	RBM18	Q96H35	190 aa	Known RBP	11.47	□□□□□ -0.57
CLTCL1-205	ENST00000538828	METTL2A	Q96IZ6	378 aa	Known RBP	11.47	□□□□□ -0.57
CLTCL1-205	ENST00000538828	CDK15	Q96Q40	435 aa		11.47	□□□□□ -0.57
CLTCL1-205	ENST00000538828	TMEM237	Q96Q45	408 aa		11.47	□□□□□ -0.57
CLTCL1-205	ENST00000538828	SHCBP1L	Q9BZQ2	653 aa		11.47	□□□□□ -0.57
CLTCL1-205	ENST00000538828	OLAH	Q9NV23	265 aa		11.47	□□□□□ -0.57
CLTCL1-205	ENST00000538828	SIRT5	Q9NXA8	310 aa		11.47	□□□□□ -0.57
CLTCL1-205	ENST00000538828	LRFN1	Q9P244	771 aa		11.47	□□□□□ -0.57
CLTCL1-205	ENST00000538828	TBK1	Q9UHD2	729 aa		11.47	□□□□□ -0.57
CLTCL1-205	ENST00000538828	ZNF225	Q9UK10	706 aa		11.47	□□□□□ -0.57
CLTCL1-205	ENST00000538828	FBXW2	Q9UKT8	454 aa		11.47	□□□□□ -0.57

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