RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 RERGLQ9H628 205 aa17.74■□□□□ 0.43
SFSWAP-207ENST00000538548 TMEM38AQ9H6F2 299 aa17.74■□□□□ 0.43
SFSWAP-207ENST00000538548 ZFYVE1Q9HBF4 777 aa17.74■□□□□ 0.43
SFSWAP-207ENST00000538548 C12orf4Q9NQ89 552 aa17.74■□□□□ 0.43
SFSWAP-207ENST00000538548 SPATA6Q9NWH7 488 aaPredicted RBP17.74■□□□□ 0.43
SFSWAP-207ENST00000538548 REV1Q9UBZ9 1251 aa17.74■□□□□ 0.43
SFSWAP-207ENST00000538548 DIMT1Q9UNQ2 313 aaKnown RBP17.74■□□□□ 0.43
SFSWAP-207ENST00000538548 KCNE2Q9Y6J6 123 aa17.74■□□□□ 0.43
SFSWAP-207ENST00000538548 SCN8AQ9UQD0 1980 aa17.74■□□□□ 0.43
SFSWAP-207ENST00000538548 SGK494L7N484 410 aa17.74■□□□□ 0.43
SFSWAP-207ENST00000538548 STK25O00506 426 aa17.74■□□□□ 0.43
SFSWAP-207ENST00000538548 RNASET2O00584 256 aaKnown RBP17.74■□□□□ 0.43
SFSWAP-207ENST00000538548 IDSP22304 550 aa17.74■□□□□ 0.43
SFSWAP-207ENST00000538548 CPT1AP50416 773 aa17.74■□□□□ 0.43
SFSWAP-207ENST00000538548 ARF5P84085 180 aa17.74■□□□□ 0.43
SFSWAP-207ENST00000538548 FOXD4Q12950 439 aaPredicted RBP17.74■□□□□ 0.43
SFSWAP-207ENST00000538548 NFE2L1Q14494 772 aa17.74■□□□□ 0.43
SFSWAP-207ENST00000538548 P2RY14Q15391 338 aa17.74■□□□□ 0.43
SFSWAP-207ENST00000538548 C12orf73Q69YU5 71 aa17.74■□□□□ 0.43
SFSWAP-207ENST00000538548 LAPTM4BQ86VI4 370 aa17.74■□□□□ 0.43
SFSWAP-207ENST00000538548 ZNF680Q8NEM1 530 aa17.74■□□□□ 0.43
SFSWAP-207ENST00000538548 METTL2AQ96IZ6 378 aaKnown RBP17.74■□□□□ 0.43
SFSWAP-207ENST00000538548 AIFM2Q9BRQ8 373 aa17.74■□□□□ 0.43
SFSWAP-207ENST00000538548 RHCGQ9UBD6 479 aa17.74■□□□□ 0.43
SFSWAP-207ENST00000538548 KCND3Q9UK17 655 aa17.74■□□□□ 0.43
SFSWAP-207ENST00000538548 POLHQ9Y253 713 aa17.74■□□□□ 0.43
SFSWAP-207ENST00000538548 SPIN1Q9Y657 262 aaPredicted RBP17.74■□□□□ 0.43
SFSWAP-207ENST00000538548 CDH10Q9Y6N8 788 aa17.74■□□□□ 0.43
SFSWAP-207ENST00000538548 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.73■□□□□ 0.43
SFSWAP-207ENST00000538548 LOC102723532A0A0G2JNH3 316 aa17.73■□□□□ 0.43
SFSWAP-207ENST00000538548 SMIM30A4D0T7 59 aa17.73■□□□□ 0.43
SFSWAP-207ENST00000538548 I3L521 148 aa17.73■□□□□ 0.43
SFSWAP-207ENST00000538548 FABP7O15540 132 aa17.73■□□□□ 0.43
SFSWAP-207ENST00000538548 CD160O95971 181 aa17.73■□□□□ 0.43
SFSWAP-207ENST00000538548 ITPKAP23677 461 aa17.73■□□□□ 0.43
SFSWAP-207ENST00000538548 BEX3Q00994 111 aa17.73■□□□□ 0.43
SFSWAP-207ENST00000538548 ZNF177Q13360 481 aaPredicted RBP17.73■□□□□ 0.43
SFSWAP-207ENST00000538548 RIN1Q13671 783 aa17.73■□□□□ 0.43
SFSWAP-207ENST00000538548 SF1Q15637 639 aaKnown RBP17.73■□□□□ 0.43
SFSWAP-207ENST00000538548 OCLNQ16625 522 aa17.73■□□□□ 0.43
SFSWAP-207ENST00000538548 FAM110CQ1W6H9 321 aa17.73■□□□□ 0.43
SFSWAP-207ENST00000538548 TMIGD1Q6UXZ0 262 aa17.73■□□□□ 0.43
SFSWAP-207ENST00000538548 LINGO4Q6UY18 593 aa17.73■□□□□ 0.43
SFSWAP-207ENST00000538548 ZNF852Q6ZMS4 543 aa17.73■□□□□ 0.43
SFSWAP-207ENST00000538548 ZNF598Q86UK7 904 aaKnown RBP17.73■□□□□ 0.43
SFSWAP-207ENST00000538548 OR8H3Q8N146 312 aa17.73■□□□□ 0.43
SFSWAP-207ENST00000538548 PLA2G15Q8NCC3 412 aa17.73■□□□□ 0.43
SFSWAP-207ENST00000538548 HJURPQ8NCD3 748 aaPredicted RBP17.73■□□□□ 0.43
SFSWAP-207ENST00000538548 OR52N2Q8NGI0 321 aa17.73■□□□□ 0.43
SFSWAP-207ENST00000538548 KLHL42Q9P2K6 505 aa17.73■□□□□ 0.43
SFSWAP-207ENST00000538548 ING4Q9UNL4 249 aa17.73■□□□□ 0.43
SFSWAP-207ENST00000538548 GLYATL1P3A0A0U1RQE8 302 aa17.73■□□□□ 0.43
SFSWAP-207ENST00000538548 FAM227AF5H4B4 570 aa17.73■□□□□ 0.43
SFSWAP-207ENST00000538548 PLOD3O60568 738 aa17.73■□□□□ 0.43
SFSWAP-207ENST00000538548 TSPAN9O75954 239 aa17.73■□□□□ 0.43
SFSWAP-207ENST00000538548 IFNW1P05000 195 aa17.73■□□□□ 0.43
SFSWAP-207ENST00000538548 C8GP07360 202 aa17.73■□□□□ 0.43
SFSWAP-207ENST00000538548 ZNF865P0CJ78 1059 aaPredicted RBP17.73■□□□□ 0.43
SFSWAP-207ENST00000538548 GSTM5P46439 218 aa17.73■□□□□ 0.43
SFSWAP-207ENST00000538548 INPP1P49441 399 aa17.73■□□□□ 0.43
SFSWAP-207ENST00000538548 CDK6Q00534 326 aa17.73■□□□□ 0.43
SFSWAP-207ENST00000538548 IL18Q14116 193 aa17.73■□□□□ 0.43
SFSWAP-207ENST00000538548 MFSD13AQ14CX5 517 aa17.73■□□□□ 0.43
SFSWAP-207ENST00000538548 BICRALQ6AI39 1079 aa17.73■□□□□ 0.43
SFSWAP-207ENST00000538548 ATAD1Q8NBU5 361 aa17.73■□□□□ 0.43
SFSWAP-207ENST00000538548 TOR1AIP2Q8NFQ8 470 aa17.73■□□□□ 0.43
SFSWAP-207ENST00000538548 C1GALT1C1Q96EU7 318 aa17.73■□□□□ 0.43
SFSWAP-207ENST00000538548 MTERF1Q99551 399 aaKnown RBP17.73■□□□□ 0.43
SFSWAP-207ENST00000538548 PPIL3Q9H2H8 161 aaKnown RBP17.73■□□□□ 0.43
SFSWAP-207ENST00000538548 SPNS1Q9H2V7 528 aa17.73■□□□□ 0.43
SFSWAP-207ENST00000538548 FOLH1BQ9HBA9 442 aa17.73■□□□□ 0.43
SFSWAP-207ENST00000538548 MALT1Q9UDY8 824 aa17.73■□□□□ 0.43
SFSWAP-207ENST00000538548 HCN2Q9UL51 889 aa17.73■□□□□ 0.43
SFSWAP-207ENST00000538548 TRBC2A0A5B9 178 aa17.72■□□□□ 0.43
SFSWAP-207ENST00000538548 BET1O15155 118 aa17.72■□□□□ 0.43
SFSWAP-207ENST00000538548 LHCGRP22888 699 aa17.72■□□□□ 0.43
SFSWAP-207ENST00000538548 SLC11A2P49281 568 aa17.72■□□□□ 0.43
SFSWAP-207ENST00000538548 MGAT3Q09327 533 aa17.72■□□□□ 0.43
SFSWAP-207ENST00000538548 MBTPS1Q14703 1052 aa17.72■□□□□ 0.43
SFSWAP-207ENST00000538548 HEPACAMQ14CZ8 416 aa17.72■□□□□ 0.43
SFSWAP-207ENST00000538548 GPR33Q49SQ1 333 aa17.72■□□□□ 0.43
SFSWAP-207ENST00000538548 ARMC12Q5T9G4 340 aa17.72■□□□□ 0.43
SFSWAP-207ENST00000538548 LIPJQ5W064 366 aa17.72■□□□□ 0.43
SFSWAP-207ENST00000538548 HDDC2Q7Z4H3 204 aa17.72■□□□□ 0.43
SFSWAP-207ENST00000538548 NXPE1Q8N323 547 aa17.72■□□□□ 0.43
SFSWAP-207ENST00000538548 SYT14Q8NB59 555 aa17.72■□□□□ 0.43
SFSWAP-207ENST00000538548 WDR20Q8TBZ3 569 aa17.72■□□□□ 0.43
SFSWAP-207ENST00000538548 MYO19Q96H55 970 aa17.72■□□□□ 0.43
SFSWAP-207ENST00000538548 B3GNT4Q9C0J1 378 aa17.72■□□□□ 0.43
SFSWAP-207ENST00000538548 LHX3Q9UBR4 397 aa17.72■□□□□ 0.43
SFSWAP-207ENST00000538548 ABT1Q9ULW3 272 aaKnown RBP17.72■□□□□ 0.43
SFSWAP-207ENST00000538548 TRPM7Q96QT4 1865 aa17.72■□□□□ 0.43
SFSWAP-207ENST00000538548 QSOX1O00391 747 aa17.72■□□□□ 0.43
SFSWAP-207ENST00000538548 SLC30A4O14863 429 aa17.72■□□□□ 0.43
SFSWAP-207ENST00000538548 UGDHO60701 494 aa17.72■□□□□ 0.43
SFSWAP-207ENST00000538548 SOX14O95416 240 aa17.72■□□□□ 0.43
SFSWAP-207ENST00000538548 ANXA4P09525 319 aaPredicted RBP17.72■□□□□ 0.43
SFSWAP-207ENST00000538548 DDX5P17844 614 aaKnown RBP17.72■□□□□ 0.43
SFSWAP-207ENST00000538548 CTGFP29279 349 aa17.72■□□□□ 0.43
SFSWAP-207ENST00000538548 FKBP1BP68106 108 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms