RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 SPHK1Q9NYA1 384 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 NYNRINQ9P2P1 1898 aaKnown RBP3.4□□□□□ -1.87
PTPN22-211ENST00000538253 CACNA1IQ9P0X4 2223 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 A0A1W2PQM1 296 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 SMIM23A6NLE4 172 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 CDRT15L2A8MXV6 281 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 NPIPB8E9PQR5 432 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 MEN1O00255 615 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 BTN3A3O00478 584 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 ZNF749O43361 778 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 GDF9O60383 454 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 PLOD3O60568 738 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 NDUFS6O75380 124 aaKnown RBP3.4□□□□□ -1.87
PTPN22-211ENST00000538253 DLGAP3O95886 979 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 HPP00738 406 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 FGF4P08620 206 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 ATP6V1B1P15313 513 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 CCNA2P20248 432 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 M6PRP20645 277 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 MAGP20916 626 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 PTPN4P29074 926 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 VSX2P58304 361 aaPredicted RBP3.4□□□□□ -1.87
PTPN22-211ENST00000538253 CSNK1G2P78368 415 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 RBPJQ06330 500 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 OLIG2Q13516 323 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 CYLC2Q14093 348 aaPredicted RBP3.4□□□□□ -1.87
PTPN22-211ENST00000538253 PRTGQ2VWP7 1150 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 CNPY1Q3B7I2 92 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 ATP6AP1LQ52LC2 224 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 TOR1AIP1Q5JTV8 583 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 HP1BP3Q5SSJ5 553 aaPredicted RBP3.4□□□□□ -1.87
PTPN22-211ENST00000538253 MZT2BQ6NZ67 158 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 MTFR2Q6P444 385 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 SBSNQ6UWP8 590 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 SLCO4C1Q6ZQN7 724 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 RGS9BPQ6ZS82 235 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 NUP54Q7Z3B4 507 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 ISCA2Q86U28 154 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 SLCO6A1Q86UG4 719 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 IGDCC3Q8IVU1 814 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 PLPP5Q8NEB5 264 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 OR2Y1Q8NGV0 311 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 OR10Z1Q8NGY1 313 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 CCL4L1Q8NHW4 92 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 ZNF501Q96CX3 271 aaPredicted RBP3.4□□□□□ -1.87
PTPN22-211ENST00000538253 ITPKCQ96DU7 683 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 ZNF845Q96IR2 970 aaPredicted RBP3.4□□□□□ -1.87
PTPN22-211ENST00000538253 MNTQ99583 582 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 BCL7BQ9BQE9 202 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 NUDT22Q9BRQ3 303 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 MRPL1Q9BYD6 325 aaKnown RBP3.4□□□□□ -1.87
PTPN22-211ENST00000538253 TMBIM4Q9HC24 238 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 LHX9Q9NQ69 397 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 ACSS2Q9NR19 701 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 PRTFDC1Q9NRG1 225 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 GLRX2Q9NS18 164 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 OXSMQ9NWU1 459 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 VPS29Q9UBQ0 182 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 KCNN3Q9UGI6 736 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 SLC7A8Q9UHI5 535 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 CACNG2Q9Y698 323 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 FAM221AA4D161 298 aa3.39□□□□□ -1.87
PTPN22-211ENST00000538253 SH3D21A4FU49 640 aa3.39□□□□□ -1.87
PTPN22-211ENST00000538253 A8MU76 341 aa3.39□□□□□ -1.87
PTPN22-211ENST00000538253 MAGEB17A8MXT2 336 aa3.39□□□□□ -1.87
PTPN22-211ENST00000538253 H0YGG7 62 aa3.39□□□□□ -1.87
PTPN22-211ENST00000538253 TRIM77I1YAP6 450 aa3.39□□□□□ -1.87
PTPN22-211ENST00000538253 TP53I11O14683 189 aa3.39□□□□□ -1.87
PTPN22-211ENST00000538253 SLC22A2O15244 555 aa3.39□□□□□ -1.87
PTPN22-211ENST00000538253 HYAL3O43820 417 aaPredicted RBP3.39□□□□□ -1.87
PTPN22-211ENST00000538253 TBX19O60806 448 aa3.39□□□□□ -1.87
PTPN22-211ENST00000538253 SCELO95171 688 aa3.39□□□□□ -1.87
PTPN22-211ENST00000538253 IFNA14P01570 189 aa3.39□□□□□ -1.87
PTPN22-211ENST00000538253 CAPNS1P04632 268 aa3.39□□□□□ -1.87
PTPN22-211ENST00000538253 EIF2S1P05198 315 aaKnown RBP3.39□□□□□ -1.87
PTPN22-211ENST00000538253 TNNI3P19429 210 aa3.39□□□□□ -1.87
PTPN22-211ENST00000538253 CSNK2A2P19784 350 aaPredicted RBP3.39□□□□□ -1.87
PTPN22-211ENST00000538253 CPN2P22792 545 aa3.39□□□□□ -1.87
PTPN22-211ENST00000538253 PIK3R1P27986 724 aa3.39□□□□□ -1.87
PTPN22-211ENST00000538253 ADH7P40394 386 aa3.39□□□□□ -1.87
PTPN22-211ENST00000538253 STAT5AP42229 794 aa3.39□□□□□ -1.87
PTPN22-211ENST00000538253 HSPA7P48741 367 aa3.39□□□□□ -1.87
PTPN22-211ENST00000538253 IST1P53990 364 aa3.39□□□□□ -1.87
PTPN22-211ENST00000538253 NRG3P56975 720 aa3.39□□□□□ -1.87
PTPN22-211ENST00000538253 ARF3P61204 181 aaPredicted RBP3.39□□□□□ -1.87
PTPN22-211ENST00000538253 C19orf57Q0VDD7 668 aa3.39□□□□□ -1.87
PTPN22-211ENST00000538253 FASTKD3Q14CZ7 662 aaKnown RBP3.39□□□□□ -1.87
PTPN22-211ENST00000538253 NCF4Q15080 339 aa3.39□□□□□ -1.87
PTPN22-211ENST00000538253 GSTA3Q16772 222 aa3.39□□□□□ -1.87
PTPN22-211ENST00000538253 ST3GAL2Q16842 350 aa3.39□□□□□ -1.87
PTPN22-211ENST00000538253 UGT8Q16880 541 aa3.39□□□□□ -1.87
PTPN22-211ENST00000538253 MMEL1Q495T6 779 aa3.39□□□□□ -1.87
PTPN22-211ENST00000538253 MINDY4Q4G0A6 757 aa3.39□□□□□ -1.87
PTPN22-211ENST00000538253 CCDC58Q4VC31 144 aa3.39□□□□□ -1.87
PTPN22-211ENST00000538253 ZNF789Q5FWF6 425 aa3.39□□□□□ -1.87
PTPN22-211ENST00000538253 KHDRBS2Q5VWX1 349 aaKnown RBP3.39□□□□□ -1.87
PTPN22-211ENST00000538253 C6orf89Q6UWU4 347 aa3.39□□□□□ -1.87
PTPN22-211ENST00000538253 QSOX2Q6ZRP7 698 aa3.39□□□□□ -1.87
PTPN22-211ENST00000538253 SLC30A8Q8IWU4 369 aa3.39□□□□□ -1.87
PTPN22-211ENST00000538253 IQCKQ8N0W5 287 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms