RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 UTP6Q9NYH9 597 aaKnown RBP8.53□□□□□ -1.04
CPSF7-217ENST00000537162 KLHL8Q9P2G9 620 aaPredicted RBP8.53□□□□□ -1.04
CPSF7-217ENST00000537162 HOOK1Q9UJC3 728 aaKnown RBP8.53□□□□□ -1.04
CPSF7-217ENST00000537162 PCDHB10Q9UN67 800 aa8.53□□□□□ -1.04
CPSF7-217ENST00000537162 PTGDR2Q9Y5Y4 395 aa8.53□□□□□ -1.04
CPSF7-217ENST00000537162 MYO1FO00160 1098 aa8.52□□□□□ -1.05
CPSF7-217ENST00000537162 SMAPO00193 183 aa8.52□□□□□ -1.05
CPSF7-217ENST00000537162 SMAD9O15198 467 aaKnown RBP8.52□□□□□ -1.05
CPSF7-217ENST00000537162 PIN1P1O15428 100 aa8.52□□□□□ -1.05
CPSF7-217ENST00000537162 DLX3O60479 287 aa8.52□□□□□ -1.05
CPSF7-217ENST00000537162 RAMP1O60894 148 aa8.52□□□□□ -1.05
CPSF7-217ENST00000537162 PRB2P02812 416 aaPredicted RBP8.52□□□□□ -1.05
CPSF7-217ENST00000537162 ZNF888P0CJ79 500 aaPredicted RBP8.52□□□□□ -1.05
CPSF7-217ENST00000537162 KDELR1P24390 212 aa8.52□□□□□ -1.05
CPSF7-217ENST00000537162 IL2RGP31785 369 aa8.52□□□□□ -1.05
CPSF7-217ENST00000537162 PNLIPRP1P54315 467 aa8.52□□□□□ -1.05
CPSF7-217ENST00000537162 RPS15AP62244 130 aaKnown RBP8.52□□□□□ -1.05
CPSF7-217ENST00000537162 DYNLT1P63172 113 aa8.52□□□□□ -1.05
CPSF7-217ENST00000537162 SEMA3AQ14563 771 aa8.52□□□□□ -1.05
CPSF7-217ENST00000537162 CYP1B1Q16678 543 aa8.52□□□□□ -1.05
CPSF7-217ENST00000537162 VAX1Q5SQQ9 334 aa8.52□□□□□ -1.05
CPSF7-217ENST00000537162 C11orf71Q6IPW1 123 aa8.52□□□□□ -1.05
CPSF7-217ENST00000537162 DEF8Q6ZN54 512 aa8.52□□□□□ -1.05
CPSF7-217ENST00000537162 SPNS2Q8IVW8 549 aa8.52□□□□□ -1.05
CPSF7-217ENST00000537162 FAM83FQ8NEG4 500 aaPredicted RBP8.52□□□□□ -1.05
CPSF7-217ENST00000537162 PPHLN1Q8NEY8 458 aaKnown RBP8.52□□□□□ -1.05
CPSF7-217ENST00000537162 FBF1Q8TES7 1133 aa8.52□□□□□ -1.05
CPSF7-217ENST00000537162 ZNF418Q8TF45 676 aaPredicted RBP8.52□□□□□ -1.05
CPSF7-217ENST00000537162 PTPMT1Q8WUK0 201 aaPredicted RBP8.52□□□□□ -1.05
CPSF7-217ENST00000537162 TP53INP1Q96A56 240 aa8.52□□□□□ -1.05
CPSF7-217ENST00000537162 SPACA9Q96E40 222 aaPredicted RBP8.52□□□□□ -1.05
CPSF7-217ENST00000537162 ZNF845Q96IR2 970 aaPredicted RBP8.52□□□□□ -1.05
CPSF7-217ENST00000537162 ADAD1Q96M93 576 aaKnown RBP8.52□□□□□ -1.05
CPSF7-217ENST00000537162 PKP4Q99569 1192 aa8.52□□□□□ -1.05
CPSF7-217ENST00000537162 CARD6Q9BX69 1037 aa8.52□□□□□ -1.05
CPSF7-217ENST00000537162 GRIP2Q9C0E4 1043 aa8.52□□□□□ -1.05
CPSF7-217ENST00000537162 UNKLQ9H9P5 680 aaKnown RBP8.52□□□□□ -1.05
CPSF7-217ENST00000537162 ARNT2Q9HBZ2 717 aa8.52□□□□□ -1.05
CPSF7-217ENST00000537162 MRPL47Q9HD33 250 aaKnown RBP8.52□□□□□ -1.05
CPSF7-217ENST00000537162 SYBUQ9NX95 663 aa8.52□□□□□ -1.05
CPSF7-217ENST00000537162 RSPH14Q9UHP6 348 aa8.52□□□□□ -1.05
CPSF7-217ENST00000537162 ANAPC7Q9UJX3 599 aa8.52□□□□□ -1.05
CPSF7-217ENST00000537162 C15orf41Q9Y2V0 281 aa8.52□□□□□ -1.05
CPSF7-217ENST00000537162 CCDC162PA2VCL2 907 aa8.51□□□□□ -1.05
CPSF7-217ENST00000537162 LRP5LA4QPB2 252 aa8.51□□□□□ -1.05
CPSF7-217ENST00000537162 C3orf70A6NLC5 250 aaPredicted RBP8.51□□□□□ -1.05
CPSF7-217ENST00000537162 C4orf51C9J302 202 aa8.51□□□□□ -1.05
CPSF7-217ENST00000537162 EIF3FO00303 357 aaPredicted RBP8.51□□□□□ -1.05
CPSF7-217ENST00000537162 PLOD2O00469 737 aa8.51□□□□□ -1.05
CPSF7-217ENST00000537162 HCRTR2O43614 444 aa8.51□□□□□ -1.05
CPSF7-217ENST00000537162 CCNDBP1O95273 360 aa8.51□□□□□ -1.05
CPSF7-217ENST00000537162 ACTL6AO96019 429 aa8.51□□□□□ -1.05
CPSF7-217ENST00000537162 CD3EP07766 207 aa8.51□□□□□ -1.05
CPSF7-217ENST00000537162 PPP3CBP16298 524 aa8.51□□□□□ -1.05
CPSF7-217ENST00000537162 ALOX12P18054 663 aa8.51□□□□□ -1.05
CPSF7-217ENST00000537162 NR4A2P43354 598 aa8.51□□□□□ -1.05
CPSF7-217ENST00000537162 C21orf58P58505 322 aa8.51□□□□□ -1.05
CPSF7-217ENST00000537162 SRSF4Q08170 494 aaKnown RBP8.51□□□□□ -1.05
CPSF7-217ENST00000537162 SPARCL1Q14515 664 aa8.51□□□□□ -1.05
CPSF7-217ENST00000537162 HERC3Q15034 1050 aa8.51□□□□□ -1.05
CPSF7-217ENST00000537162 HADHQ16836 314 aaKnown RBP8.51□□□□□ -1.05
CPSF7-217ENST00000537162 TPD52L1Q16890 204 aaPredicted RBP8.51□□□□□ -1.05
CPSF7-217ENST00000537162 CAPN13Q6MZZ7 669 aaPredicted RBP8.51□□□□□ -1.05
CPSF7-217ENST00000537162 CLNKQ7Z7G1 428 aa8.51□□□□□ -1.05
CPSF7-217ENST00000537162 LRRC56Q8IYG6 542 aaPredicted RBP8.51□□□□□ -1.05
CPSF7-217ENST00000537162 CA13Q8N1Q1 262 aa8.51□□□□□ -1.05
CPSF7-217ENST00000537162 GABPB2Q8TAK5 448 aaPredicted RBP8.51□□□□□ -1.05
CPSF7-217ENST00000537162 ZNF480Q8WV37 535 aa8.51□□□□□ -1.05
CPSF7-217ENST00000537162 ALKBH8Q96BT7 664 aaKnown RBP8.51□□□□□ -1.05
CPSF7-217ENST00000537162 C19orf43Q9BQ61 176 aa8.51□□□□□ -1.05
CPSF7-217ENST00000537162 OR8D2Q9GZM6 311 aa8.51□□□□□ -1.05
CPSF7-217ENST00000537162 ACTR6Q9GZN1 396 aa8.51□□□□□ -1.05
CPSF7-217ENST00000537162 C12orf49Q9H741 205 aa8.51□□□□□ -1.05
CPSF7-217ENST00000537162 TMEM184CQ9NVA4 438 aa8.51□□□□□ -1.05
CPSF7-217ENST00000537162 CISD1Q9NZ45 108 aaKnown RBP8.51□□□□□ -1.05
CPSF7-217ENST00000537162 CNIH4Q9P003 139 aa8.51□□□□□ -1.05
CPSF7-217ENST00000537162 IP6K2Q9UHH9 426 aa8.51□□□□□ -1.05
CPSF7-217ENST00000537162 CTAGE15A4D2H0 777 aa8.5□□□□□ -1.05
CPSF7-217ENST00000537162 MYO1CO00159 1063 aa8.5□□□□□ -1.05
CPSF7-217ENST00000537162 APOL1O14791 398 aa8.5□□□□□ -1.05
CPSF7-217ENST00000537162 CEP104O60308 925 aa8.5□□□□□ -1.05
CPSF7-217ENST00000537162 SLC16A8O95907 504 aa8.5□□□□□ -1.05
CPSF7-217ENST00000537162 CRHP06850 196 aa8.5□□□□□ -1.05
CPSF7-217ENST00000537162 HKR1P10072 659 aa8.5□□□□□ -1.05
CPSF7-217ENST00000537162 CD8BP10966 210 aa8.5□□□□□ -1.05
CPSF7-217ENST00000537162 RNH1P13489 461 aaKnown RBP8.5□□□□□ -1.05
CPSF7-217ENST00000537162 PECAM1P16284 738 aaPredicted RBP8.5□□□□□ -1.05
CPSF7-217ENST00000537162 MSNP26038 577 aaKnown RBP8.5□□□□□ -1.05
CPSF7-217ENST00000537162 ABATP80404 500 aa8.5□□□□□ -1.05
CPSF7-217ENST00000537162 PCDH1Q08174 1060 aa8.5□□□□□ -1.05
CPSF7-217ENST00000537162 FOXL1Q12952 345 aa8.5□□□□□ -1.05
CPSF7-217ENST00000537162 RAB35Q15286 201 aa8.5□□□□□ -1.05
CPSF7-217ENST00000537162 MEI1Q5TIA1 1274 aa8.5□□□□□ -1.05
CPSF7-217ENST00000537162 ENPP6Q6UWR7 440 aa8.5□□□□□ -1.05
CPSF7-217ENST00000537162 THSD4Q6ZMP0 1018 aa8.5□□□□□ -1.05
CPSF7-217ENST00000537162 ZNF571Q7Z3V5 609 aaPredicted RBP8.5□□□□□ -1.05
CPSF7-217ENST00000537162 CTAGE6Q86UF2 777 aa8.5□□□□□ -1.05
CPSF7-217ENST00000537162 MAP7D3Q8IWC1 876 aa8.5□□□□□ -1.05
CPSF7-217ENST00000537162 SVOPLQ8N434 492 aa8.5□□□□□ -1.05
CPSF7-217ENST00000537162 ZDHHC22Q8N966 263 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms