RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 CDH13P55290 713 aa16.71■□□□□ 0.27
TNFRSF1A-209ENST00000536717 MEP1AQ16819 746 aa16.71■□□□□ 0.27
TNFRSF1A-209ENST00000536717 RNF175Q8N4F7 328 aa16.71■□□□□ 0.27
TNFRSF1A-209ENST00000536717 FAM47BQ8NA70 645 aa16.71■□□□□ 0.27
TNFRSF1A-209ENST00000536717 NFAM1Q8NET5 270 aaPredicted RBP16.71■□□□□ 0.27
TNFRSF1A-209ENST00000536717 PRR7Q8TB68 274 aa16.71■□□□□ 0.27
TNFRSF1A-209ENST00000536717 MGARPQ8TDB4 240 aa16.71■□□□□ 0.27
TNFRSF1A-209ENST00000536717 KCNC2Q96PR1 638 aa16.71■□□□□ 0.27
TNFRSF1A-209ENST00000536717 ACTR8Q9H981 624 aa16.71■□□□□ 0.27
TNFRSF1A-209ENST00000536717 COPS7BQ9H9Q2 264 aaPredicted RBP16.71■□□□□ 0.27
TNFRSF1A-209ENST00000536717 ZBTB26Q9HCK0 441 aa16.71■□□□□ 0.27
TNFRSF1A-209ENST00000536717 PRTFDC1Q9NRG1 225 aa16.71■□□□□ 0.27
TNFRSF1A-209ENST00000536717 STK38LQ9Y2H1 464 aa16.71■□□□□ 0.27
TNFRSF1A-209ENST00000536717 WDR91A4D1P6 747 aa16.7■□□□□ 0.26
TNFRSF1A-209ENST00000536717 A8MUA0 341 aa16.7■□□□□ 0.26
TNFRSF1A-209ENST00000536717 RTCAO00442 366 aaKnown RBP16.7■□□□□ 0.26
TNFRSF1A-209ENST00000536717 UGDHO60701 494 aa16.7■□□□□ 0.26
TNFRSF1A-209ENST00000536717 SH3BGRLO75368 114 aa16.7■□□□□ 0.26
TNFRSF1A-209ENST00000536717 OTCP00480 354 aa16.7■□□□□ 0.26
TNFRSF1A-209ENST00000536717 TGFB1P01137 390 aa16.7■□□□□ 0.26
TNFRSF1A-209ENST00000536717 NEFHP12036 1026 aa16.7■□□□□ 0.26
TNFRSF1A-209ENST00000536717 ST13P50502 369 aaKnown RBP16.7■□□□□ 0.26
TNFRSF1A-209ENST00000536717 HSD17B7P56937 341 aa16.7■□□□□ 0.26
TNFRSF1A-209ENST00000536717 PPP2R2AP63151 447 aa16.7■□□□□ 0.26
TNFRSF1A-209ENST00000536717 TGM3Q08188 693 aa16.7■□□□□ 0.26
TNFRSF1A-209ENST00000536717 LIPJQ5W064 366 aa16.7■□□□□ 0.26
TNFRSF1A-209ENST00000536717 RPS27LQ71UM5 84 aaKnown RBP16.7■□□□□ 0.26
TNFRSF1A-209ENST00000536717 MYLK4Q86YV6 388 aaPredicted RBP16.7■□□□□ 0.26
TNFRSF1A-209ENST00000536717 ST6GALNAC3Q8NDV1 305 aa16.7■□□□□ 0.26
TNFRSF1A-209ENST00000536717 SRFBP1Q8NEF9 429 aaKnown RBP16.7■□□□□ 0.26
TNFRSF1A-209ENST00000536717 PPP1R14CQ8TAE6 165 aa16.7■□□□□ 0.26
TNFRSF1A-209ENST00000536717 ADAMTS18Q8TE60 1221 aa16.7■□□□□ 0.26
TNFRSF1A-209ENST00000536717 TRPC4APQ8TEL6 797 aa16.7■□□□□ 0.26
TNFRSF1A-209ENST00000536717 SLX1AQ9BQ83 275 aa16.7■□□□□ 0.26
TNFRSF1A-209ENST00000536717 KCMF1Q9P0J7 381 aa16.7■□□□□ 0.26
TNFRSF1A-209ENST00000536717 DOPEY1Q5JWR5 2465 aa16.7■□□□□ 0.26
TNFRSF1A-209ENST00000536717 OR7A17O14581 309 aa16.7■□□□□ 0.26
TNFRSF1A-209ENST00000536717 AGFG2O95081 481 aa16.7■□□□□ 0.26
TNFRSF1A-209ENST00000536717 SCELO95171 688 aa16.7■□□□□ 0.26
TNFRSF1A-209ENST00000536717 TSPAN8P19075 237 aa16.7■□□□□ 0.26
TNFRSF1A-209ENST00000536717 ATP5A1P25705 553 aaKnown RBP16.7■□□□□ 0.26
TNFRSF1A-209ENST00000536717 SERPINB1P30740 379 aa16.7■□□□□ 0.26
TNFRSF1A-209ENST00000536717 LCP2Q13094 533 aa16.7■□□□□ 0.26
TNFRSF1A-209ENST00000536717 TUBA3CQ13748 450 aa16.7■□□□□ 0.26
TNFRSF1A-209ENST00000536717 INAQ16352 499 aa16.7■□□□□ 0.26
TNFRSF1A-209ENST00000536717 ZNF324BQ6AW86 544 aaPredicted RBP16.7■□□□□ 0.26
TNFRSF1A-209ENST00000536717 TUBA3EQ6PEY2 450 aa16.7■□□□□ 0.26
TNFRSF1A-209ENST00000536717 FAM180AQ6UWF9 173 aa16.7■□□□□ 0.26
TNFRSF1A-209ENST00000536717 FRMD7Q6ZUT3 714 aa16.7■□□□□ 0.26
TNFRSF1A-209ENST00000536717 ZNF595Q8IYB9 648 aa16.7■□□□□ 0.26
TNFRSF1A-209ENST00000536717 SLC5A8Q8N695 610 aa16.7■□□□□ 0.26
TNFRSF1A-209ENST00000536717 APCDD1LQ8NCL9 501 aa16.7■□□□□ 0.26
TNFRSF1A-209ENST00000536717 OR52B6Q8NGF0 335 aa16.7■□□□□ 0.26
TNFRSF1A-209ENST00000536717 HUS1BQ8NHY5 278 aa16.7■□□□□ 0.26
TNFRSF1A-209ENST00000536717 CMTM7Q96FZ5 175 aa16.7■□□□□ 0.26
TNFRSF1A-209ENST00000536717 MAPKAP1Q9BPZ7 522 aa16.7■□□□□ 0.26
TNFRSF1A-209ENST00000536717 TBCDQ9BTW9 1192 aa16.7■□□□□ 0.26
TNFRSF1A-209ENST00000536717 NTMT1Q9BV86 223 aa16.7■□□□□ 0.26
TNFRSF1A-209ENST00000536717 GATA5Q9BWX5 397 aaPredicted RBP16.7■□□□□ 0.26
TNFRSF1A-209ENST00000536717 OR51B5Q9H339 312 aa16.7■□□□□ 0.26
TNFRSF1A-209ENST00000536717 GSTO2Q9H4Y5 243 aa16.7■□□□□ 0.26
TNFRSF1A-209ENST00000536717 MRPS33Q9Y291 106 aaKnown RBP16.7■□□□□ 0.26
TNFRSF1A-209ENST00000536717 TSC22D4Q9Y3Q8 395 aa16.7■□□□□ 0.26
TNFRSF1A-209ENST00000536717 CLDN4O14493 209 aa16.69■□□□□ 0.26
TNFRSF1A-209ENST00000536717 CLDN9O95484 217 aa16.69■□□□□ 0.26
TNFRSF1A-209ENST00000536717 RNF224P0DH78 156 aa16.69■□□□□ 0.26
TNFRSF1A-209ENST00000536717 PPP2R1BP30154 601 aa16.69■□□□□ 0.26
TNFRSF1A-209ENST00000536717 PIK3CBP42338 1070 aa16.69■□□□□ 0.26
TNFRSF1A-209ENST00000536717 WDR4P57081 412 aaKnown RBP16.69■□□□□ 0.26
TNFRSF1A-209ENST00000536717 TAS2R50P59544 299 aa16.69■□□□□ 0.26
TNFRSF1A-209ENST00000536717 SLC13A2Q13183 592 aa16.69■□□□□ 0.26
TNFRSF1A-209ENST00000536717 DDX39BQ13838 428 aaKnown RBP16.69■□□□□ 0.26
TNFRSF1A-209ENST00000536717 TMEM35AQ53FP2 167 aa16.69■□□□□ 0.26
TNFRSF1A-209ENST00000536717 DEPDC1Q5TB30 811 aa16.69■□□□□ 0.26
TNFRSF1A-209ENST00000536717 KHDRBS2Q5VWX1 349 aaKnown RBP16.69■□□□□ 0.26
TNFRSF1A-209ENST00000536717 CHSY3Q70JA7 882 aa16.69■□□□□ 0.26
TNFRSF1A-209ENST00000536717 MILR1Q7Z6M3 343 aa16.69■□□□□ 0.26
TNFRSF1A-209ENST00000536717 LGI4Q8N135 537 aa16.69■□□□□ 0.26
TNFRSF1A-209ENST00000536717 BCORP1Q8N888 145 aa16.69■□□□□ 0.26
TNFRSF1A-209ENST00000536717 ACOT4Q8N9L9 421 aa16.69■□□□□ 0.26
TNFRSF1A-209ENST00000536717 SIGLEC12Q96PQ1 595 aa16.69■□□□□ 0.26
TNFRSF1A-209ENST00000536717 PSMG3-AS1Q96PY0 264 aa16.69■□□□□ 0.26
TNFRSF1A-209ENST00000536717 ZNF382Q96SR6 550 aa16.69■□□□□ 0.26
TNFRSF1A-209ENST00000536717 TRMOQ9BU70 441 aa16.69■□□□□ 0.26
TNFRSF1A-209ENST00000536717 ROGDIQ9GZN7 287 aa16.69■□□□□ 0.26
TNFRSF1A-209ENST00000536717 CDCP1Q9H5V8 836 aa16.69■□□□□ 0.26
TNFRSF1A-209ENST00000536717 LYRM4Q9HD34 91 aa16.69■□□□□ 0.26
TNFRSF1A-209ENST00000536717 DMRT3Q9NQL9 472 aa16.69■□□□□ 0.26
TNFRSF1A-209ENST00000536717 ANKRD10Q9NXR5 420 aa16.69■□□□□ 0.26
TNFRSF1A-209ENST00000536717 ADGRE2Q9UHX3 823 aa16.69■□□□□ 0.26
TNFRSF1A-209ENST00000536717 PCNX1Q96RV3 2341 aa16.68■□□□□ 0.26
TNFRSF1A-209ENST00000536717 BLACEA4D250 179 aa16.68■□□□□ 0.26
TNFRSF1A-209ENST00000536717 GABRR3A8MPY1 467 aa16.68■□□□□ 0.26
TNFRSF1A-209ENST00000536717 H0YIV9 168 aa16.68■□□□□ 0.26
TNFRSF1A-209ENST00000536717 SAP18O00422 153 aaKnown RBP16.68■□□□□ 0.26
TNFRSF1A-209ENST00000536717 PRAMEF2O60811 474 aa16.68■□□□□ 0.26
TNFRSF1A-209ENST00000536717 MYO1DO94832 1006 aa16.68■□□□□ 0.26
TNFRSF1A-209ENST00000536717 EDN3P14138 238 aa16.68■□□□□ 0.26
TNFRSF1A-209ENST00000536717 HIST1H1TP22492 207 aaPredicted RBP16.68■□□□□ 0.26
TNFRSF1A-209ENST00000536717 CD96P40200 585 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms