RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 OR8D1Q8WZ84 308 aa11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 SLC38A4Q969I6 547 aa11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 AGAP4Q96P64 663 aa11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 CPPED1Q9BRF8 314 aaPredicted RBP11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 NTMT1Q9BV86 223 aa11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 SPATA9Q9BWV2 254 aa11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 DSN1Q9H410 356 aa11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 SCPEP1Q9HB40 452 aa11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 OPTCQ9UBM4 332 aa11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 GRIP1Q9Y3R0 1128 aa11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 PKP3Q9Y446 797 aa11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 MAGED1Q9Y5V3 778 aaPredicted RBP11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 TRBV5-3A0A0A0MS03 114 aa11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 A0A1W2PQ72 361 aa11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 A6NL46 340 aa11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 A8MU76 341 aa11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 K7ERQ8 282 aa11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 TNFSF14O43557 240 aa11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 NIPSNAP2O75323 286 aa11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 UPK1BO75841 260 aa11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 DKK1O94907 266 aa11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 MFN2O95140 757 aa11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 FTH1P02794 183 aa11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 YES1P07947 543 aa11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 RHOCP08134 193 aa11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 MAT2AP31153 395 aaKnown RBP11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 ACVRL1P37023 503 aa11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 DDOSTP39656 456 aa11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 GRK6P43250 576 aa11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 CLK1P49759 484 aaKnown RBP11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 HTR6P50406 440 aa11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 CLDN8P56748 225 aa11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 TEKQ02763 1124 aa11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 ELP6Q0PNE2 266 aa11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 CNTN1Q12860 1018 aa11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 DNASE1L3Q13609 305 aa11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 RAPSNQ13702 412 aa11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 ABRAXAS2Q15018 415 aa11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 ESCO2Q56NI9 601 aa11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 UBE2UQ5VVX9 321 aa11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 PTRHD1Q6GMV3 140 aaKnown RBP11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 LAIR2Q6ISS4 152 aa11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 GCNT7Q6ZNI0 430 aa11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 ZNF767PQ75MW2 155 aa11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 PIWIL3Q7Z3Z3 882 aaKnown RBP11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 SNX20Q7Z614 316 aa11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 B3GNT8Q7Z7M8 397 aa11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 DSG4Q86SJ6 1040 aa11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 SERPINA11Q86U17 422 aa11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 PLPP6Q8IY26 295 aa11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 LIX1Q8N485 282 aa11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 MYDGFQ969H8 173 aa11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 FAM131CQ96AQ9 280 aa11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 ULK4Q96C45 1275 aa11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 LGALS12Q96DT0 336 aa11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 MAP6Q96JE9 813 aa11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 ELF4Q99607 663 aaPredicted RBP11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 TMEM246Q9BRR3 403 aa11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 ITPAQ9BY32 194 aa11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 P2RY12Q9H244 342 aa11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 RIBC2Q9H4K1 309 aa11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 CARS2Q9HA77 564 aaKnown RBP11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 ACOT13Q9NPJ3 140 aa11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 RPRD1BQ9NQG5 326 aaKnown RBP11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 DDX28Q9NUL7 540 aaKnown RBP11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 KIF17Q9P2E2 1029 aa11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 ERVK-18Q9QC07 812 aa11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 OSGIN1Q9UJX0 560 aa11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 POLHQ9Y253 713 aa11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 CCL27Q9Y4X3 112 aa11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 TP53BP1Q12888 1972 aaPredicted RBP11.11□□□□□ -0.63
CHRNB1-202ENST00000536404 ITPR1Q14643 2758 aa11.1□□□□□ -0.63
CHRNB1-202ENST00000536404 A0A0D9SEW6 157 aa11.1□□□□□ -0.63
CHRNB1-202ENST00000536404 EFCAB9A8MZ26 197 aa11.1□□□□□ -0.63
CHRNB1-202ENST00000536404 TLR4O00206 839 aa11.1□□□□□ -0.63
CHRNB1-202ENST00000536404 CBX4O00257 560 aa11.1□□□□□ -0.63
CHRNB1-202ENST00000536404 MUSKO15146 869 aa11.1□□□□□ -0.63
CHRNB1-202ENST00000536404 SMAD6O43541 496 aaKnown RBP11.1□□□□□ -0.63
CHRNB1-202ENST00000536404 LATO43561 262 aa11.1□□□□□ -0.63
CHRNB1-202ENST00000536404 PLRG1O43660 514 aaKnown RBP11.1□□□□□ -0.63
CHRNB1-202ENST00000536404 SEC22BO75396 215 aa11.1□□□□□ -0.63
CHRNB1-202ENST00000536404 ZNF254O75437 659 aa11.1□□□□□ -0.63
CHRNB1-202ENST00000536404 SERPINI2O75830 405 aa11.1□□□□□ -0.63
CHRNB1-202ENST00000536404 PIRTP0C851 137 aa11.1□□□□□ -0.63
CHRNB1-202ENST00000536404 SRCP12931 536 aa11.1□□□□□ -0.63
CHRNB1-202ENST00000536404 PTX3P26022 381 aaPredicted RBP11.1□□□□□ -0.63
CHRNB1-202ENST00000536404 CLCN7P51798 805 aa11.1□□□□□ -0.63
CHRNB1-202ENST00000536404 NXPH1P58417 271 aa11.1□□□□□ -0.63
CHRNB1-202ENST00000536404 NKG7Q16617 165 aa11.1□□□□□ -0.63
CHRNB1-202ENST00000536404 ZNF404Q494X3 552 aa11.1□□□□□ -0.63
CHRNB1-202ENST00000536404 AGBL4Q5VU57 503 aa11.1□□□□□ -0.63
CHRNB1-202ENST00000536404 FAM46CQ5VWP2 391 aa11.1□□□□□ -0.63
CHRNB1-202ENST00000536404 KIAA1614Q5VZ46 1190 aa11.1□□□□□ -0.63
CHRNB1-202ENST00000536404 FAM205BPQ63HN1 556 aa11.1□□□□□ -0.63
CHRNB1-202ENST00000536404 KDM4DQ6B0I6 523 aa11.1□□□□□ -0.63
CHRNB1-202ENST00000536404 DET1Q7L5Y6 550 aa11.1□□□□□ -0.63
CHRNB1-202ENST00000536404 TMPRSS7Q7RTY8 843 aa11.1□□□□□ -0.63
CHRNB1-202ENST00000536404 PAGE2Q7Z2X7 111 aa11.1□□□□□ -0.63
CHRNB1-202ENST00000536404 ZBTB46Q86UZ6 589 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms