RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 TBX6O95947 436 aaPredicted RBP15.26■□□□□ 0.03
CHMP1A-202ENST00000535997 PIPP12273 146 aaPredicted RBP15.26■□□□□ 0.03
CHMP1A-202ENST00000535997 ADRB3P13945 408 aa15.26■□□□□ 0.03
CHMP1A-202ENST00000535997 CNR2P34972 360 aa15.26■□□□□ 0.03
CHMP1A-202ENST00000535997 MAGEA8P43361 318 aa15.26■□□□□ 0.03
CHMP1A-202ENST00000535997 SLC15A1P46059 708 aa15.26■□□□□ 0.03
CHMP1A-202ENST00000535997 UGT2B15P54855 530 aa15.26■□□□□ 0.03
CHMP1A-202ENST00000535997 LIM2P55344 173 aa15.26■□□□□ 0.03
CHMP1A-202ENST00000535997 CD300CQ08708 224 aa15.26■□□□□ 0.03
CHMP1A-202ENST00000535997 ILKQ13418 452 aa15.26■□□□□ 0.03
CHMP1A-202ENST00000535997 MAPK11Q15759 364 aa15.26■□□□□ 0.03
CHMP1A-202ENST00000535997 HNRNPA1L2Q32P51 320 aaKnown RBP15.26■□□□□ 0.03
CHMP1A-202ENST00000535997 FAM83HQ6ZRV2 1179 aaPredicted RBP15.26■□□□□ 0.03
CHMP1A-202ENST00000535997 PDZD3Q86UT5 571 aa15.26■□□□□ 0.03
CHMP1A-202ENST00000535997 C17orf64Q86WR6 236 aa15.26■□□□□ 0.03
CHMP1A-202ENST00000535997 DCUN1D3Q8IWE4 304 aa15.26■□□□□ 0.03
CHMP1A-202ENST00000535997 HORMAD2Q8N7B1 307 aa15.26■□□□□ 0.03
CHMP1A-202ENST00000535997 TFGQ92734 400 aaPredicted RBP15.26■□□□□ 0.03
CHMP1A-202ENST00000535997 LRRC3BQ96PB8 259 aa15.26■□□□□ 0.03
CHMP1A-202ENST00000535997 CHCHD6Q9BRQ6 235 aa15.26■□□□□ 0.03
CHMP1A-202ENST00000535997 ZNF717Q9BY31 904 aaPredicted RBP15.26■□□□□ 0.03
CHMP1A-202ENST00000535997 PRDM8Q9NQV8 689 aa15.26■□□□□ 0.03
CHMP1A-202ENST00000535997 INIPQ9NRY2 104 aa15.26■□□□□ 0.03
CHMP1A-202ENST00000535997 ANKMY1Q9P2S6 941 aa15.26■□□□□ 0.03
CHMP1A-202ENST00000535997 CACNB4O00305 520 aaPredicted RBP15.25■□□□□ 0.03
CHMP1A-202ENST00000535997 CAPN5O15484 640 aaPredicted RBP15.25■□□□□ 0.03
CHMP1A-202ENST00000535997 PDE9AO76083 593 aa15.25■□□□□ 0.03
CHMP1A-202ENST00000535997 ADH1CP00326 375 aa15.25■□□□□ 0.03
CHMP1A-202ENST00000535997 OSMP13725 252 aa15.25■□□□□ 0.03
CHMP1A-202ENST00000535997 SERPINB1P30740 379 aa15.25■□□□□ 0.03
CHMP1A-202ENST00000535997 BSGP35613 385 aa15.25■□□□□ 0.03
CHMP1A-202ENST00000535997 HSD17B2P37059 387 aa15.25■□□□□ 0.03
CHMP1A-202ENST00000535997 CRISP3P54108 245 aa15.25■□□□□ 0.03
CHMP1A-202ENST00000535997 SNRPGP62308 76 aaKnown RBP15.25■□□□□ 0.03
CHMP1A-202ENST00000535997 MED22Q15528 200 aa15.25■□□□□ 0.03
CHMP1A-202ENST00000535997 TCTN3Q6NUS6 607 aa15.25■□□□□ 0.03
CHMP1A-202ENST00000535997 C12orf40Q86WS4 652 aa15.25■□□□□ 0.03
CHMP1A-202ENST00000535997 ADGRF3Q8IZF5 1079 aa15.25■□□□□ 0.03
CHMP1A-202ENST00000535997 CELF5Q8N6W0 485 aaKnown RBP15.25■□□□□ 0.03
CHMP1A-202ENST00000535997 OR5AR1Q8NGP9 310 aa15.25■□□□□ 0.03
CHMP1A-202ENST00000535997 Q96MT0 163 aa15.25■□□□□ 0.03
CHMP1A-202ENST00000535997 QRFPRQ96P65 431 aa15.25■□□□□ 0.03
CHMP1A-202ENST00000535997 AIF1LQ9BQI0 150 aa15.25■□□□□ 0.03
CHMP1A-202ENST00000535997 ACAT2Q9BWD1 397 aa15.25■□□□□ 0.03
CHMP1A-202ENST00000535997 PELI2Q9HAT8 420 aa15.25■□□□□ 0.03
CHMP1A-202ENST00000535997 POLE4Q9NR33 117 aa15.25■□□□□ 0.03
CHMP1A-202ENST00000535997 ZNF229Q9UJW7 825 aa15.25■□□□□ 0.03
CHMP1A-202ENST00000535997 INSL6Q9Y581 213 aa15.25■□□□□ 0.03
CHMP1A-202ENST00000535997 EDDM13A0A1B0GTR0 161 aa15.24■□□□□ 0.03
CHMP1A-202ENST00000535997 TRIM43BA6NCK2 446 aa15.24■□□□□ 0.03
CHMP1A-202ENST00000535997 PRRT4C9JH25 899 aa15.24■□□□□ 0.03
CHMP1A-202ENST00000535997 M0R129 80 aa15.24■□□□□ 0.03
CHMP1A-202ENST00000535997 CCRL2O00421 344 aa15.24■□□□□ 0.03
CHMP1A-202ENST00000535997 KDM1AO60341 852 aa15.24■□□□□ 0.03
CHMP1A-202ENST00000535997 MED26O95402 600 aa15.24■□□□□ 0.03
CHMP1A-202ENST00000535997 OXSR1O95747 527 aaPredicted RBP15.24■□□□□ 0.03
CHMP1A-202ENST00000535997 HNRNPA1P09651 372 aaKnown RBP eCLIP15.24■□□□□ 0.03
CHMP1A-202ENST00000535997 ERGP11308 486 aa15.24■□□□□ 0.03
CHMP1A-202ENST00000535997 POU1F1P28069 291 aa15.24■□□□□ 0.03
CHMP1A-202ENST00000535997 SOX6P35712 828 aa15.24■□□□□ 0.03
CHMP1A-202ENST00000535997 ELAVL3Q14576 367 aaKnown RBP15.24■□□□□ 0.03
CHMP1A-202ENST00000535997 TMEM52BQ4KMG9 183 aa15.24■□□□□ 0.03
CHMP1A-202ENST00000535997 SOWAHCQ53LP3 525 aaPredicted RBP15.24■□□□□ 0.03
CHMP1A-202ENST00000535997 STEAP3Q658P3 488 aa15.24■□□□□ 0.03
CHMP1A-202ENST00000535997 FAM180BQ6P0A1 224 aa15.24■□□□□ 0.03
CHMP1A-202ENST00000535997 C6orf120Q7Z4R8 191 aa15.24■□□□□ 0.03
CHMP1A-202ENST00000535997 GRASPQ7Z6J2 395 aaPredicted RBP15.24■□□□□ 0.03
CHMP1A-202ENST00000535997 AMZ2Q86W34 360 aa15.24■□□□□ 0.03
CHMP1A-202ENST00000535997 C2orf73Q8N5S3 287 aaPredicted RBP15.24■□□□□ 0.03
CHMP1A-202ENST00000535997 RASSF5Q8WWW0 418 aa15.24■□□□□ 0.03
CHMP1A-202ENST00000535997 TRIM43Q96BQ3 446 aaPredicted RBP15.24■□□□□ 0.03
CHMP1A-202ENST00000535997 MS4A8Q9BY19 250 aa15.24■□□□□ 0.03
CHMP1A-202ENST00000535997 UCK2Q9BZX2 261 aa15.24■□□□□ 0.03
CHMP1A-202ENST00000535997 RNF167Q9H6Y7 350 aa15.24■□□□□ 0.03
CHMP1A-202ENST00000535997 FZD3Q9NPG1 666 aa15.24■□□□□ 0.03
CHMP1A-202ENST00000535997 SLAMF7Q9NQ25 335 aa15.24■□□□□ 0.03
CHMP1A-202ENST00000535997 NDOR1Q9UHB4 597 aa15.24■□□□□ 0.03
CHMP1A-202ENST00000535997 MKLN1Q9UL63 735 aa15.24■□□□□ 0.03
CHMP1A-202ENST00000535997 MGAT4BQ9UQ53 548 aa15.24■□□□□ 0.03
CHMP1A-202ENST00000535997 MYO7AQ13402 2215 aa15.24■□□□□ 0.03
CHMP1A-202ENST00000535997 TRBV4-1A0A0J9YWV2 114 aa15.24■□□□□ 0.03
CHMP1A-202ENST00000535997 PNMA8CA0A1B0GUJ8 204 aa15.24■□□□□ 0.03
CHMP1A-202ENST00000535997 PDPK1O15530 556 aa15.24■□□□□ 0.03
CHMP1A-202ENST00000535997 TBX1O43435 398 aa15.24■□□□□ 0.03
CHMP1A-202ENST00000535997 BCHEP06276 602 aa15.24■□□□□ 0.03
CHMP1A-202ENST00000535997 FRKP42685 505 aaPredicted RBP15.24■□□□□ 0.03
CHMP1A-202ENST00000535997 TMED10P49755 219 aaKnown RBP15.24■□□□□ 0.03
CHMP1A-202ENST00000535997 PCBP4P57723 403 aaKnown RBP15.24■□□□□ 0.03
CHMP1A-202ENST00000535997 CNTN1Q12860 1018 aa15.24■□□□□ 0.03
CHMP1A-202ENST00000535997 DCST1Q5T197 706 aa15.24■□□□□ 0.03
CHMP1A-202ENST00000535997 TNFAIP8L2Q6P589 184 aaPredicted RBP15.24■□□□□ 0.03
CHMP1A-202ENST00000535997 ERN2Q76MJ5 926 aaKnown RBP15.24■□□□□ 0.03
CHMP1A-202ENST00000535997 DSG4Q86SJ6 1040 aa15.24■□□□□ 0.03
CHMP1A-202ENST00000535997 NLGN4XQ8N0W4 816 aa15.24■□□□□ 0.03
CHMP1A-202ENST00000535997 PARP16Q8N5Y8 322 aa15.24■□□□□ 0.03
CHMP1A-202ENST00000535997 TMEM19Q96HH6 336 aa15.24■□□□□ 0.03
CHMP1A-202ENST00000535997 OR5M11Q96RB7 305 aa15.24■□□□□ 0.03
CHMP1A-202ENST00000535997 F2RL3Q96RI0 385 aa15.24■□□□□ 0.03
CHMP1A-202ENST00000535997 SLC25A19Q9HC21 320 aa15.24■□□□□ 0.03
CHMP1A-202ENST00000535997 REV1Q9UBZ9 1251 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms